Pruf019330.1
Basic Information
- Insect
- Pimpla rufipes
- Gene Symbol
- nfxl1
- Assembly
- GCA_963932165.1
- Location
- OZ010643.1:2774981-2794154[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.53 1.2e+04 -3.2 1.1 15 19 125 129 124 129 0.81 2 19 0.1 2.3e+03 -1.0 0.8 4 10 160 166 159 166 0.94 3 19 3.1e-08 0.0007 19.9 16.9 1 19 174 191 174 191 0.99 4 19 0.13 2.8e+03 -1.2 1.5 6 10 217 221 216 221 0.90 5 19 4.9e-07 0.011 16.0 12.8 4 19 230 245 228 245 0.94 6 19 1 2.2e+04 -5.2 1.9 10 13 252 255 251 256 0.74 7 19 0.0015 35 4.9 13.6 1 19 280 299 274 299 0.91 8 19 2.1e-05 0.46 10.9 9.2 1 18 335 352 335 353 0.97 9 19 0.0058 1.3e+02 3.0 8.0 1 12 387 398 387 398 0.94 10 19 0.93 2.1e+04 -4.0 1.3 6 10 408 412 408 412 0.96 11 19 1.8e-07 0.004 17.5 16.5 1 19 418 436 418 436 0.94 12 19 1 2.2e+04 -4.2 0.8 6 10 465 469 465 469 0.95 13 19 0.00026 5.7 7.4 11.5 9 19 484 494 482 494 0.90 14 19 0.00026 5.7 7.4 6.4 1 12 504 514 504 514 0.95 15 19 0.43 9.6e+03 -2.9 5.8 14 18 547 551 547 552 0.89 16 19 0.009 2e+02 2.4 6.5 1 12 588 599 582 599 0.90 17 19 0.29 6.4e+03 -2.4 1.4 6 10 616 620 615 620 0.88 18 19 4.1e-05 0.91 9.9 10.0 4 19 630 645 628 645 0.91 19 19 6.7e-06 0.15 12.4 12.2 1 16 690 704 690 710 0.87
Sequence Information
- Coding Sequence
- ATGCGGAAATTCAAGAGGGCTCAGGCCCAAAATCAGGCCTCCATCGAGAAGCATCTTGAGGCGAATCGGCTGGACTCCTCCAGCGAGGAGGAAAACGAGGCTGGGGATGAAGTTCTTCAGCAGGCGGTCACCAAAGTGCTGTCTTCGTATCAGGGCGAGGGTGGAGATACCGAAAAGTCTCTGTCGTACCTGACGGACACTTTTCAGTCGGGAGGTGCCATCTGCCTGATCTGCATCTCCTCTGTGAAGAAGACGGAGCCGATATGGAGCTGTTCGACCTGCTTCTCCTTCATGCATCTGCCCTGCATTCAACACTGGATACGCGACAGTCTGAGCTACAAGCAAGAGAAAGGAATAACTCCGCTGTGGGCCTGCCCGAAATGCCGCAAGGAGTACCAGGAGGACCAGATCCCAAAGCGCTACCTCTGCTTCTGCGGAAAAACGCCGGACCCGCCGTATCAACCCTGGACGATTCCGCACTCCTGCGGCGAGAAGTGCGAGAAGCCTCTCCTCCCAGTCTGCGGCCACCGCTGCGTTCTCCTCTGTCACCCGGGTCCCTGCCCGCCGTGCCCAAAGATGGTGCGCGTCGCCTGTTTCTGCGGCAAACAATCACCCCAGCCGCGTCGCTGCAACGCCAAGGAGTGGAGTTGCCAGCAGGTCTGCTCGAAGCCCCTTCCTCACTGCGATCACCGCTGCAGCCTGGAATGCCACTCGGGCGACTGTCCGCCCTGCTCAAAAATCCTCCTAGCTCGCTGCCActgcggcgaaaaaaccgaggGCCGCCCGTGCAACGAGTCCGCCTGGTTCTGCGACAAACCCTGCGGCAATCGTCTCGCCTGCAACATCCACGTCTGCGAGGGTCGCTGCCATCGCTCGGGCGAGTGCGGCGAGTGTCCTCACGCGAAAAATCGCACCTGTCCGTGCGGCAAAAAGCGCTACGACGTCTCCTGCAAGCAAAAGCAGGTCCCAACGTGCGGCGACACGTGCGGCAAGCTCCTCGACTGCGGCTCGCACTACTGCAACATGCGTTGCCACACCGATCGCTGCGGCCAGTGCCTCGAGGTCACCGTCAAGCTCTGCCGGTGCCGCAGCCACGAGAAGGAGATCGCCTGCGCCAAGGAGTTTCACTGCAGCAAGAAATGCACGCAGATGCGACAGTGCGGCAAGCATCTCTGCAACAAGAAGTGCTGCGACTGCCTGCTGCGCGGCAACTTCAACGTGTGCGAGAAGATATGCGACAATACGCTGAATTGCCAGAAGCACAAGTGCCCCGCGCCCTGCCACAGCGGGCCGTGTTATCCGTGTCCAAGGACCAACATTATTCAGTGCCGATGCGGCAACAGCAAAATCACCATTCCCTGCGGCAGAATCAAGCGTATCAAACCGCCGCACTGCAACAAACTCTGCAAAATACCGCCGGTTTGTCATCATCCGAAGCGCGAGTCGCACAAATGCCACCACGGGCCATGCCCGCCTTGCAGGAAGATCTGCGGCTTGGTGCACAAAAAGTGCGGCCACTCGTGTCCCGCGGTTTGTCACACGAAGGTCTGGGTGAAGGTCAAGGCGAACGGGGTCGCTGGGCAGGGTGGGGGAGGCTTCTTTGATGCGCCGAAGGAGCGGATGCAGCTCAAGACGCTGCCGTGTCCGCCCTGCGAGGTTTCCGTTCAAGTCACTTGTCTCGGGGGTCACGAGACGATTCCTCTGCCTTGCCACAGAGCAGTTTCGAGCTCTTGCCACAGAAAATGCGGGCAGCTGTTGGGATGCACGAATCACGACTGCGAGATGAGCTGCCATCGGGTTTTTGTTGGGAacgaggagggagaggagagcAGGAGCTGCGCGGAGTGCGAGAGACCCTGCGAGCTGCCCAGGCCCGCCGGATGCGCTCACGCTTGCCCGAGATTTTGTCACAAGGCGCCGTGCTATCCGTGCAAACAGCTGGTTAAGATTGCCTGCCACTGCGGGATTAACTCGCTCTACAAACGATGCGCGGAGTTGACGTCGGCTGATGAGGCGAAACGCGGGGAGCTGCTCAAGTGCGGCAATCAGTGCCCGAAGAACTACCCGTGCGGCCATCGTTGCGTGGAGAATTGCCATCCGGGTGCCTGTCCGAACCCCGAGGCTTGCAGCAAGAAGGTCAAAGTCTGGTGCAAGTGCAAGAGAATCAAGAAGGAGTTTCCCTGCGCGGTTTTGCGCAAGAAAAACGTGACCGTCGATTGCGACGGCGTCTGCCGCAAGATAAAGGAGGAGCAGGATCGACTTCGCGAGATCGAGGCGGCGCGGAAGCGCAAAGAGGAGGAGGCGCGCAATCAGTTGGAGGTGGAGAAGTTCGAGAGGAAATTCAAGCCGCGACGCAAGGGCAAAGGGAGGACGCAGTCGAGCGACGATCTCAGCCAGGACAGAAGCTATTTGTTCAAAATCGCCGCCGCCTTGGCTGTGCTTTCCGTTACTATAGCATTCGCCGTAATTTACACCACCGAACGATCCTAA
- Protein Sequence
- MRKFKRAQAQNQASIEKHLEANRLDSSSEEENEAGDEVLQQAVTKVLSSYQGEGGDTEKSLSYLTDTFQSGGAICLICISSVKKTEPIWSCSTCFSFMHLPCIQHWIRDSLSYKQEKGITPLWACPKCRKEYQEDQIPKRYLCFCGKTPDPPYQPWTIPHSCGEKCEKPLLPVCGHRCVLLCHPGPCPPCPKMVRVACFCGKQSPQPRRCNAKEWSCQQVCSKPLPHCDHRCSLECHSGDCPPCSKILLARCHCGEKTEGRPCNESAWFCDKPCGNRLACNIHVCEGRCHRSGECGECPHAKNRTCPCGKKRYDVSCKQKQVPTCGDTCGKLLDCGSHYCNMRCHTDRCGQCLEVTVKLCRCRSHEKEIACAKEFHCSKKCTQMRQCGKHLCNKKCCDCLLRGNFNVCEKICDNTLNCQKHKCPAPCHSGPCYPCPRTNIIQCRCGNSKITIPCGRIKRIKPPHCNKLCKIPPVCHHPKRESHKCHHGPCPPCRKICGLVHKKCGHSCPAVCHTKVWVKVKANGVAGQGGGGFFDAPKERMQLKTLPCPPCEVSVQVTCLGGHETIPLPCHRAVSSSCHRKCGQLLGCTNHDCEMSCHRVFVGNEEGEESRSCAECERPCELPRPAGCAHACPRFCHKAPCYPCKQLVKIACHCGINSLYKRCAELTSADEAKRGELLKCGNQCPKNYPCGHRCVENCHPGACPNPEACSKKVKVWCKCKRIKKEFPCAVLRKKNVTVDCDGVCRKIKEEQDRLREIEAARKRKEEEARNQLEVEKFERKFKPRRKGKGRTQSSDDLSQDRSYLFKIAAALAVLSVTIAFAVIYTTERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00343554;
- 90% Identity
- -
- 80% Identity
- -