Basic Information

Insect: Pimpla rufipes
Gene Symbol: Hr39
Assembly: GCA_963932165.1
Location: OZ010631.1:17549446-17555018[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.5 1.1e+04 -4.3 1.0 145 175 25 53 16 62 0.41

2 5 0.43 3.2e+03 -2.5 13.9 36 164 234 333 203 381 0.47

3 5 3 2.2e+04 -5.7 15.7 52 128 388 462 368 489 0.69

4 5 5.7e-08 0.00043 20.1 0.0 1 21 557 577 557 581 0.92

5 5 1.4e-70 1e-66 226.4 0.0 187 408 722 937 592 937 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.5	1.1e+04	-4.3	1.0	145	175	25	53	16	62	0.41
2	5	0.43	3.2e+03	-2.5	13.9	36	164	234	333	203	381	0.47
3	5	3	2.2e+04	-5.7	15.7	52	128	388	462	368	489	0.69
4	5	5.7e-08	0.00043	20.1	0.0	1	21	557	577	557	581	0.92
5	5	1.4e-70	1e-66	226.4	0.0	187	408	722	937	592	937	0.78

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCACGGAGGGCCCGGGCTGGTGGCCTCCGGCGCAATCGTGGAAGTCATCCGCcacctcctcgtcgtcgtcgtcgtcgtcgacgatacCCACGTCCCGCACGCTCGAGGCCGGCAAAAACGTTTCCGTCACGACGATCAACGTGCCACCGGCCGAGGAGATGCACGATGGTAAAAGCGTGTGCAAGTTCCTGGGAGGACAAAACGGCGTGACCGTATCGGTCGTCTCGAGTTGCGGCAGCGGTCCGGGCAGCGGCATGGGCACCGGACCTGGTagcggaggaggcggaggtggCGCGTCTTCCTCGTGTCCGGAGTCGAGTTCCTACGACGATCTCGAGGACAGCGACGGGGAAGTTAGCAAGATCGACTTTCGCGGTGTTAATCTGCggacgaagaagaagcgcgATGTCTCCGGTGGTACGGAGAACGATTGCGGCGCCGTGGGCGCCGACAATCTCGAGCAACAGCAGCCCGAGAGACCGATGTCATGGGAGGGCGAGCTATCCGATCAGGAAATGTCTTCCAATACCATCACCAACCAGGACCACGAGGAGACCTCGATGGAAGGTGTTCAGGTATGCGGCGCGAGTCCGGGACCCCAGGAGCAAAAGTTCCCAATAAAGCCAGAGCCGGATTTCCACGTGCACGGCTCTCACAGCGATGGGAGCCTGCCGTTGTCGCACGCGCAGCAGCTAcaacaccagcagcagcaccagcagcaacagcagcagcaacagcagcagcagcaacgaggAATCGAGAGTCTCGAGCAGGCGCAACAGAGCGATTTACCGCTGTTGGTCGGCAAGCTCCTTGGTGGTTACAACAGTTCCACGCCGAATCACAGCCCCATACTGAATCCGCGGCATCACCTCACGAAGCACAGTCACACGAGGTCGCAAGTTCCGTCCCCGGATTCGGCGATACACTCGGCCTACAGCGTCTTCAGTTCGCCAACGCAGAGTCCTCACGCGGCGCGCCACTCGGCCCTCGGGGCCGGCAGTCCGGTGccctcctcgtctctctccctGTCCCGTCACAGTTTCAACAATTCCACgtcctccctctcgctctcgttgtCCCACTCGTTGTCGCGCAACAATTCCGACGCCTCGAGCAGTTGTTACAGCTACGGTTCCCTGAGCCCGCCCACGCACTCGCCCGTCCAGCAACCGAGACACTCGCACGCCCAGCAtcatcaccagcagcagcagcagcagcaacagcagcagcaacagcaacaacagcagcagcagcagcagcaacaggtTGCGCAGGGTAGTCCGTTGCACTTGCCGTCACCCGGGGCGGCAAACGCGCATCAATACTCGACCCCGGGCTCGGAGATCTCGTCCGAGGGCCATCCCGAGGATCAGGAAGATTGCAAGATACCCTCAGCGCCGTCGGGCATCTCCACGAGGCAACAGCTCATCAACAGCCCCTGTCCCATCTGCGGCGACAAAATCAGTGGTTTTCATTACGGAATTTTCTCCTGCGAGTCCTGCAAGGGTTTCTTCAAGCGCACCGTGCAGAATCGCAAGAACTACGTGTGCCTGAGAGGCGCCGGTTGTCCCGTCACCGtcgcgacgaggaaaaaatgtcccgccTGTCGTTTCGACAAGTGTCTCAATATGGGCATGAAACTCGAGGCGATCAGGGAGGACAGGACCCGCGGCGGCAGGAGCACGTATCAGTGCACGTACACGCTGCCGGCGAATCTCATCGGTAGCCCCGCGGGCGGAATGTCCGGCGACAAGATGACCGGCGGTAACTGCAGTCCCGCGCCTCCCGGCTCCGAGCATCATCATTCCGTTAGACACCACTGGAATCACTCGCACAAGATGCAAGCGGTGCCCCAGTTGCTGCAGGACATCATGGACGTCGAGCATCTCTGGCActacaacgacaacgacagaacgaccggcggcggcggcggcggcggaggacaGAACGCGAGCTCGAGCCTCGGCGGCAACGGAGCGCCGATGCCCAACGATATATCCGGCGGCCTCGGGAGTCTTTCCGGCGGCGGTAACACCGGGAGCAGCAACGGCAATGTCGACAACAGGTCCGAACCCACAAGATCGAGCTCCGCCGGTCCGGCTGGCAATCACGAGCATCAGCAGCACTCGCACTCGCCGACGAACAATCCCTCGCCCGGGACCACCAATTCCAATCCCAACGGAAATTCCACGCAGAATCCTGACTTTCTGTCGAACCTTTGCAATATCGCCGATCATAGATTGTACAAGATTGTCAAGTGGTGCAAGAGCCTGCCACTTTTCAAGAATATCTCTATAGACGATCAGATATGTTTGCTGATCAATTCGTGGTGCGAGCTGCTGCTGTTCTCGTGCTGCTTTCGCAGCATGAGCACGCCCGGCGAGATCAGGGTCTCGCTCGGGAAATCCATCACCCTGGAACAAGCGCGGCAGCTCGGTTTGGCCACGTGCATCGAGAGGATGCTCGCTTTCACGAATAATCTCAGGCGGCTGAGGGTCGATCAGTACGAGTACGTCGCAATGAAGGTAATCGTTTTGTTGACTTCGGATACGAGCGAGCTGAAGGAGCCCGAGAAAGTCCGAGCCTCGCAGGAGAAGGCACTTCAGGCGCTGCAGCAGTACACGATCGCGAGGTATCCGGAGATGCCAGCGAAATTCGGCGAGCTTCTCCTGCGGATACCGGACCTGCAGAGGACTTGCCAAGCCGGCAAAGAGTTGCTCAGCGCAAAGCGCGCCGAGGGTGAGGGCAGCTCGTTCAATCTCTTGATGGAATTGTTGCGGGGAGATCACTGA
Protein Sequence: MSEQNGPTEGPGWWPPAQSWKSSATSSSSSSSSTIPTSRTLEAGKNVSVTTINVPPAEEMHDGKSVCKFLGGQNGVTVSVVSSCGSGPGSGMGTGPGSGGGGGGASSSCPESSSYDDLEDSDGEVSKIDFRGVNLRTKKKRDVSGGTENDCGAVGADNLEQQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFHVHGSHSDGSLPLSHAQQLQHQQQHQQQQQQQQQQQQRGIESLEQAQQSDLPLLVGKLLGGYNSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHSHAQHHHQQQQQQQQQQQQQQQQQQQQQQVAQGSPLHLPSPGAANAHQYSTPGSEISSEGHPEDQEDCKIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSPAGGMSGDKMTGGNCSPAPPGSEHHHSVRHHWNHSHKMQAVPQLLQDIMDVEHLWHYNDNDRTTGGGGGGGGQNASSSLGGNGAPMPNDISGGLGSLSGGGNTGSSNGNVDNRSEPTRSSSAGPAGNHEHQQHSHSPTNNPSPGTTNSNPNGNSTQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059522;
90% Identity: iTF_01207436;
80% Identity: iTF_01207436;