Prap018386.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- CSRNP3
- Assembly
- GCA_905147795.1
- Location
- LR990594.1:7192109-7195896[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.36 7.3e+03 -3.2 0.5 97 109 61 74 32 103 0.45 2 5 0.39 8e+03 -3.3 0.6 68 92 156 180 139 198 0.43 3 5 3.6e-102 7.2e-98 327.0 6.1 1 218 202 411 202 411 0.93 4 5 0.16 3.2e+03 -2.0 0.9 62 101 458 496 432 517 0.41 5 5 0.056 1.1e+03 -0.6 1.4 54 111 593 654 556 685 0.50
Sequence Information
- Coding Sequence
- ATGGATGGAGATAGTTCAACTGTTCAAAAAGTAGACTGTAGCACTGCGACCATAATGGAAGACAGAGGAGAGGCAGTTCCACCTGTGATAAGTGAAGAAACTTGTGTCAGTGATGTAAATAGTGAAGACCTCAGTAGTAATGAGGAACAAAACGGTGGCAGTGTCTCTCAGTTTTATGAGAGTAGTGATAGTAAAGTAGATTATGCTGTAAAAATAGATGATAATGACACTTTAAGTGACGTAGATGATATCAAAACAGACACGGCGTCAGCGGATAGTGAAGATTCCGCTTTAGGTAGTCTTCCACCCGATTCCACACTTAATGATAGAGAAGAAGATGCACAAGATAGGTCAGATGGAAGCGATTCCGGCCTTGGATCAGAGACAGTAGAAGATGCGAAGTTACCATGTTTTGATTTAGCATTGCCGTCAACAAGTGACAATAAGAATAATGCCGAAGAAGCAACTGAACCACTCAAAAATATAGAACATAAGGAGACCCTTAATCCTGAGAATAGTGAAAAAGAAAAATCGAAAACACCTCTTAAGAGCAGTCTAAAAAGAAAATTACAAGACGAAAACAACTTAGAACCATTTCATAAAAAACGAAAAGAATCAATAAAATTCGACAATGTCACAGTTTTTTATTTTCCAAGAGCACAAGGCTTTTCTTGTGTGCCATCTCAGGGTGGGTCTACATTGGGTATGGAATGGCAACACACACACATACAGAAATTTACTTTGGCCGAGCATGCCCTAGAACAAAGGAGATTACATCGACAGCTATTACAACAATTGAAAAATGAAAGACATTCAATGTCTGGAGTTTCACTGTCCTCCAGTGAAGATAGTGACACAGAAGAAGAAGCAAGTGACATATCGGAATCAGAATTAGATTTAGACAGCTATTATTTCTTACAACCGGTACCTACGCGGCAGAGACGAGTGTTGCTTCGAGCAGCAGGCGTTAGAAAAATAGAAGGTTACGAAAAAGATGAATGCAGAGATATCAGAACGTCACGCGAGTTTTGCGGTTGTGCATGTAAAGGAGTGTGTAATCCAAATAGTTGTTCATGTAGCTTAGCTGGTATTAAATGCCAAGTTGACAGGCTTAATTTTCCATGCGGATGTAGTAGAGATGGATGTGGAAACACAACAGGTCGTATCGAGTTCAATCCTATAAGAGTGCGAACTCATTTTATTAATACTCTCGTGAGATTGGGTCTTGAAAAAAAGAATGAAGAAAGCCAAGAAGCAAAACGCCAATGGGTAGCGCACGCTATGACCAGTGCTCCACAAGTTGTATCTCATATGCCATATGATAAAGAGCACTGCCACAATATTCAAAGTACTACAGTACACAGTCATAATTCTGCAAATTCGCAAATAGAAACTTGTATTAATCCAGGAGCATTTGCCAACATTAACAAAGATACCGTGAATACATCCAGAAATGAAGAAAATAAAAGTCAAAGAAATAATCAAGACGTTCACATATTAAATTTTGATGACAAATCTAACCATAGAAACCACGACCCCTATACGTCTAATATTCTTCAAGGAAAAGGTCCGCCTTACTCGGTACCTAATACAATGAATTTTAATATGTCAAATAATTTACAAAGATATTCATGCGATCTCAATTACGCTTACGAACAGCGTGCGGACCACGGCCATGCCTTTAAATCATTACAAAGTTACTCAGCAACAAGCTTTGAGGAATTCGCCCAGAACTCCCACATATCAATGTTCAATCCATATGGCCACATTTACTCAACAGAGTACATGCATAAACCTTCAACGAGTATGTCGGAGCACAATTCACAATACCATCAAAATAACTACGAAATTTACAAAAATAACTGTGGAAGTAGCGAGGACAAATCTGATACAAATTACACAGCCCTAATGCCATATCAATCTAGCAATAAGTTGCAATCGGTAGATAACGATGAGAATTGGTTCAGTCAGAACACTTTATTAAACTTGGATAGTGCTGAACAAACCACACAAGACACTTGTGACGCATCACAGCCCACGCAATCTGATGGAAACACGAATGAAGTTTCGGAAAATTTTGGTGAATTAATTAAGAAAACTATGGTAGAGTCTGTTATTGTGTAG
- Protein Sequence
- MDGDSSTVQKVDCSTATIMEDRGEAVPPVISEETCVSDVNSEDLSSNEEQNGGSVSQFYESSDSKVDYAVKIDDNDTLSDVDDIKTDTASADSEDSALGSLPPDSTLNDREEDAQDRSDGSDSGLGSETVEDAKLPCFDLALPSTSDNKNNAEEATEPLKNIEHKETLNPENSEKEKSKTPLKSSLKRKLQDENNLEPFHKKRKESIKFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWQHTHIQKFTLAEHALEQRRLHRQLLQQLKNERHSMSGVSLSSSEDSDTEEEASDISESELDLDSYYFLQPVPTRQRRVLLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGVCNPNSCSCSLAGIKCQVDRLNFPCGCSRDGCGNTTGRIEFNPIRVRTHFINTLVRLGLEKKNEESQEAKRQWVAHAMTSAPQVVSHMPYDKEHCHNIQSTTVHSHNSANSQIETCINPGAFANINKDTVNTSRNEENKSQRNNQDVHILNFDDKSNHRNHDPYTSNILQGKGPPYSVPNTMNFNMSNNLQRYSCDLNYAYEQRADHGHAFKSLQSYSATSFEEFAQNSHISMFNPYGHIYSTEYMHKPSTSMSEHNSQYHQNNYEIYKNNCGSSEDKSDTNYTALMPYQSSNKLQSVDNDENWFSQNTLLNLDSAEQTTQDTCDASQPTQSDGNTNEVSENFGELIKKTMVESVIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00878860; iTF_01205709; iTF_01203249; iTF_01202473; iTF_01204904; iTF_01204047;
- 90% Identity
- iTF_01202473;
- 80% Identity
- -