Pmad002588.1
Basic Information
- Insect
- Pieris macdunnoughii
- Gene Symbol
- CSRNP3
- Assembly
- GCA_905332375.1
- Location
- CAJOBZ010000004.1:8909867-8912002[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.24 4.1e+03 -2.7 0.8 84 112 48 77 29 101 0.54 2 5 0.04 6.6e+02 -0.1 0.1 62 123 148 208 141 209 0.62 3 5 3.7e-102 6.2e-98 326.9 5.8 1 218 204 413 203 413 0.93 4 5 0.31 5.1e+03 -3.0 0.2 75 92 473 490 437 509 0.42 5 5 0.081 1.3e+03 -1.1 2.2 38 86 601 652 553 688 0.51
Sequence Information
- Coding Sequence
- ATGGATGGAGATAGTTCAACTGTTCAAAAAGTAGACTGTAGCACTGCGCCCATAATGGAAGATAGAGAAGAAGCAGTTCCACCTGTGATAAGTGAAAGAAATTGTGTCAGTGATGTAAATAGTGAAGATCTTAATAGTAATGATGAACAAAACAGTGGTAGTGTCTCTCAGTTTTATGAGATTAGTGATAGTAAAGTAGATTATGCTGTAAAAATAGATGATAATGACACTTTAAGTGACGTAGATGATATCAAAACAGACACGGCGTCAGCGGATAGTGAAGATTCCGCTTTGGGTAGTCTTCCACCCGATTCCACACTTAACGATAGAGAAGAAGATGCACAAGATAGGTCAGATGGAAGCGATTCTGGCCTTGGATCAGAGACAGTAGAGGATGCGAAGTTACCATCCTTTGATTTAGCATTGCCGTCAACAAGTGacaataagaataataataccGAAGAAGACACTGAACCTCTCAAAATAATAGAACATACGGAGACCCTTTACTCAGACAACagtgaaaaagaaaaatcgcACACACCTCTTAAGAGCAgtctaaaaagaaaattacaagACGACGAAAACAACTTAGAACCATTTCATAAAAAACGAAAAGAAGCAATAAAATTCGACAATGTcacagttttttattttccaagAGCACAAGGCTTCTCTTGTGTGCCATCTCAGGGTGGGTCTACATTGGGTATGGAATGGCAACACACACACGTACAGAAGTTTACTTTGGCCGAGCATGCCCTGGAACAAAGAAGATTACATCGACAGCTATTACAACAACTGAAAAATGAAAGACATTCTATGTCTGGTGTTTCACTGTCCTCCAGTGAAGATAGTGACACAGAAGAAGAAGCAAGTGATATATCGGAATCAGAATTAGATTTAGATAGCTATTATTTCTTACAACCAGTACCTACGCGGCAGAGACGAGCGTTACTTCGAGCAGCAGGAGTGAGAAAAATTGAAGGTTACGAAAAAGACGAATGCAGAGATATCAGAACGTCACGCGAGTTTTGCGGATGTGCATGTAAAGGAGTGTGTAATCCAAATAGTTGTTCATGTAGCTTAGCTGGTATTAAATGCCAAGTTGACAGGCTTAATTTTCCTTGTGGTTGCAGTAGAGATGGATGTGGAAACACATCAGGTCGTATCGAGTTCAATCCTATAAGAGTGCGAactcattttattaatactctCGTAAGATTGGGTCTCGAAAAAAAGAACGAAGAAAGCCAAGAAGCTAAACGCCAATGGGTAGCGCAAGCTATGACCAGTGCTCCACAAGCTATACCTCATGTATCATATGAAAAAGAGCACTGCCACAATATTCAAAGTACTGCAGTACATAGTCATAATTCTGCAAACCCTCAAATAGAAAGTTGTGTAAATCCAGGCGCATTTGCCCACATTAACAAAAATACCGTGAGTACATCCAGAAATGAAgaaaatcaaattcaaaaaaataatcaagacgtacacatattaaattttgatgaCAAATCTATCCATAGAAACCACGGCCCCTACACGTCTAATATTCTTCAAGGAAAAGGTCCGCCTCACTCAGTAACTAATACaatgaattttaatatgtcgaataatttacaaagataTTCATGCGATCTCAATTACGCTTACGAACAGCGTGCGGACCATAGTCATGCTTTTAAATCATTACAAAGTTACTCCGCAACAAGCTTTGAGGAATTCGCTCAGAATTCCCACATATCAATGTTTAATCCATATGGCCACATTTACTCAACAGAGTACATGCATAAACCTTCAACGAGTATGTCGGAGCACAATTTACAATACCATGAGCCGACGCAAAACAACTAcgaaatttacaaaaataactgTGAAAGTAGCGAGGACAAATCTGATACAAATTACACAGCCCTAATGCCATATCAATCTAGCAATAAGTTGCAATCGGTAGATAATGATGAGAATTGGTTTAGTCAGAACACGTTATTAAACTTGGATAGTGCTGAACAAACCACACAAGACACTTACGCGTCACAGCCCACGCAATCTGATGGAAACACGAATGAAGTTACGGAAAATTTTGgtgaattaattaagaaaactaTGGTAGAGTCTGTTATTGTGTAG
- Protein Sequence
- MDGDSSTVQKVDCSTAPIMEDREEAVPPVISERNCVSDVNSEDLNSNDEQNSGSVSQFYEISDSKVDYAVKIDDNDTLSDVDDIKTDTASADSEDSALGSLPPDSTLNDREEDAQDRSDGSDSGLGSETVEDAKLPSFDLALPSTSDNKNNNTEEDTEPLKIIEHTETLYSDNSEKEKSHTPLKSSLKRKLQDDENNLEPFHKKRKEAIKFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWQHTHVQKFTLAEHALEQRRLHRQLLQQLKNERHSMSGVSLSSSEDSDTEEEASDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGVCNPNSCSCSLAGIKCQVDRLNFPCGCSRDGCGNTSGRIEFNPIRVRTHFINTLVRLGLEKKNEESQEAKRQWVAQAMTSAPQAIPHVSYEKEHCHNIQSTAVHSHNSANPQIESCVNPGAFAHINKNTVSTSRNEENQIQKNNQDVHILNFDDKSIHRNHGPYTSNILQGKGPPHSVTNTMNFNMSNNLQRYSCDLNYAYEQRADHSHAFKSLQSYSATSFEEFAQNSHISMFNPYGHIYSTEYMHKPSTSMSEHNLQYHEPTQNNYEIYKNNCESSEDKSDTNYTALMPYQSSNKLQSVDNDENWFSQNTLLNLDSAEQTTQDTYASQPTQSDGNTNEVTENFGELIKKTMVESVIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206557;
- 90% Identity
- iTF_01202473;
- 80% Identity
- -