Prap010797.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- kn
- Assembly
- GCA_905147795.1
- Location
- LR990591.1:1376578-1384317[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-31 8.6e-27 93.8 0.0 11 94 136 208 127 211 0.89
Sequence Information
- Coding Sequence
- ATGGAATTGTTGGAAAGTGGCGCCATCTGCGTTAGTGCGGTCGTCCCGCTCTCGAGGCGAGGGCGTGTCCCAAGGGCGCCTCCCACAGTCCGCGGGGACGGACGGGGACGCAGCGCAACTCGAGCACTCGGCGGCGCGCTCCCGCGACGCTTGTTAGTGTTCCGCAAATTCACAACGGGATCGCCCGTACAACCGGGACTCTATCCCTCAGCGATAACCGCTGCATTAAACGCGGCGGCGGGCGGGTACACTGGCTCGCCGTGGCCGCCGCTGGAACTAGATCCCGTGGGATGGGGACGAAAACTGTACCCTTCAGGCGCGCCGAGGTCCTCCGGTGGACTTATGTTCGGCCTACATCACCAGGAGGCTGCGGGGGTACATACACAGCCTCGAGGACCGGTCACATCGCTCAAAGAAGAGCCACTCACTCGAGCATGGATGACCCCCAGCTCCTTAGTTGACAATACCAACGTGGGTGTGGGTCGAGCGCACTTCGAGAAGCAGCCTCCGAGCAACCTACGCAAGAGCAACTTCTTCCATTTCGTGGTCGCGTTGTATGATCGGGCGGGACAACCAATCGAAATTGAGCGCACTGCATTCATAGGATTTATAGAAAAGGACCAAGTAAGATACTTTTAA
- Protein Sequence
- MELLESGAICVSAVVPLSRRGRVPRAPPTVRGDGRGRSATRALGGALPRRLLVFRKFTTGSPVQPGLYPSAITAALNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGVHTQPRGPVTSLKEEPLTRAWMTPSSLVDNTNVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPIEIERTAFIGFIEKDQVRYF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205491;
- 90% Identity
- iTF_01205491;
- 80% Identity
- -