Pnap013597.1
Basic Information
- Insect
- Pieris napi
- Gene Symbol
- kn
- Assembly
- GCA_905475465.1
- Location
- FR997703.1:1652146-1662478[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-42 1.5e-38 132.9 0.0 11 116 136 231 127 233 0.92
Sequence Information
- Coding Sequence
- ATGGAATTGTTGGATAGTGGCGCCATCTGCGCTAGTGCGGTCGTCCCGCTCTCGAGGCGAGGGCGTGTCCCAAGGGCGCCTCCCACAGTCCGCGGGGACGGACGGGGACGCAGCGCAACTCGTGCACTCGGCGGCGCGCTCCCGCGACGCTTGTTAGTGTTCCGCAAATTCACAACGGGATCGCCCGTACAACCGGGACTCTATCCCTTAGCGATAACCGCCGCGTTAAACGCGGCGGCGGGCGGGTACACTGGCTCGCCGTGGCCGCCGCTGGAACTAGATCCCGTGGGATGGGGACGAAAACTGTACCCTTCAGGCGCGCCGAGGTCCTCCGGTGGACTTATGTTCGGCCTACATCACCAAGAGGCTGCAGGGGTACATACACAGCCTCGAGGACCTGTCACATCGCTCAAAGAAGAGCCGCTCACGCGAGCGTGGATGACACCCAGCTCCTTAGTTGACAATACCAATAGCGTGGGTGTTGGTCGAGCGCACTTCGAGAAGCAACCTCCTAGCAACCTGCGCAAGAGCAACTTCTTCCATTTCGTGGTCGCGTTGTATGATCGGGCGGGACAACCAATCGAGATTGAGCGCACTGCTTTCATAGGCTTTATAGAAAAGGATCAAGAAGCCGAAGGACAAAAAACAAACAACGGGATTCAATATAGGCTTCAATTGCTTTATGCAAATGGTGAGTTCAACTAA
- Protein Sequence
- MELLDSGAICASAVVPLSRRGRVPRAPPTVRGDGRGRSATRALGGALPRRLLVFRKFTTGSPVQPGLYPLAITAALNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGVHTQPRGPVTSLKEEPLTRAWMTPSSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPIEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGEFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206343;
- 90% Identity
- iTF_01206343;
- 80% Identity
- -