Prap010122.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- -
- Assembly
- GCA_905147795.1
- Location
- LR990607.1:2940564-2944772[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-18 1.2e-15 57.8 0.3 6 89 241 322 237 322 0.91 2 2 8.1 5e+03 -1.9 0.0 51 62 357 368 340 377 0.68
Sequence Information
- Coding Sequence
- ATGCTGGAGCCAGGTGATTCGACAGATAATTATTCGTCTGATGAAATCCCGACAAAAGATCGTTTAGTATTAAATGCCCTTGCTGAGACTGAAGACTGCATTGTTCCCGGTCGATCAATGAATCTTCACGCTTTTCAAAAAGTGGCAGAAGTCGCTTCCAATGCATTTTTGTCTTCCACAACTCGGAAAACAAATTCCATGGAAAAAGTATATTGGGACCTTGTCTTGTCGAGGACAAAGCATGTCTGTGTAAACGCAGCTTCCATAGACACGGGTGCCGCAGATTATGGGTTCCCAAATAATGATTCCACCGACCATTATAGTAGACATCCTTGGAACTTGAAGTGTATCGGTAGGGAGATACAGAACATGTTAAGTTTCCTGGGTCCCGTGGTTGGAATGACTGCGCGCCCACATTACATCTGGGAATGCTGTTCTCGACGAGTTGCTGGTACAGAGACCCTCATGGCCTCCCATGGATTGGGTATATGCATAGTGGAAAGAAGAAAGTATGGTATGGCATCGACGATTCGCAAAGCGATACATTTCGGAAAGCAGTGGAACGCTTGTGCCCGGCAAGCGTCCAAATATGGTTTATGCAAAGTTATACCACCTGATGGATTCACACCACCCTGTAATCTTGATGGGACTATGAACTTTAATGTAACCAACCACTACGTGCAACGGATGTTCAAACGATATGGGCCAGCTGCCAAAAAGTTGAGCACTTTCAAAGCCGTCTTGGCGTCGCAAAAAGTGACATTTAGGCGACCGCCACTACTAAGCGGCTTGGAAGTGGACTTACCATATTTATTCAAGCTAGTACAGCAAATGGGTGGCCTAAAGAAGCTAACAAAAATAGTACAATGGAACAAAGTTGCCGAGCAATTAAAGTGTTGTAATAATTTAAAAAATCCCGGTCAAAAAATTAAACAAATTTATGAAAAATATCTACTAACATATGAAGTGATGACAACGTTGGAGAATGAAAATTTGATAGAACAAGTGGAACGTGCGAAAGAAGTCAATCAAGGATGTTTAACCGTGCACGAAGTCCTTTGCAGGCATAAAAGCAAATGCTGGAGCCAGGTGATTCGACAGATAATTATTCGTCTGATGAAATCCCGACAAAAGATCGTTTAG
- Protein Sequence
- MLEPGDSTDNYSSDEIPTKDRLVLNALAETEDCIVPGRSMNLHAFQKVAEVASNAFLSSTTRKTNSMEKVYWDLVLSRTKHVCVNAASIDTGAADYGFPNNDSTDHYSRHPWNLKCIGREIQNMLSFLGPVVGMTARPHYIWECCSRRVAGTETLMASHGLGICIVERRKYGMASTIRKAIHFGKQWNACARQASKYGLCKVIPPDGFTPPCNLDGTMNFNVTNHYVQRMFKRYGPAAKKLSTFKAVLASQKVTFRRPPLLSGLEVDLPYLFKLVQQMGGLKKLTKIVQWNKVAEQLKCCNNLKNPGQKIKQIYEKYLLTYEVMTTLENENLIEQVERAKEVNQGCLTVHEVLCRHKSKCWSQVIRQIIIRLMKSRQKIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206325;
- 90% Identity
- iTF_01206325;
- 80% Identity
- iTF_01206325;