Prap010128.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- -
- Assembly
- GCA_905147795.1
- Location
- LR990607.1:2968827-2979002[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-18 9.7e-16 58.1 0.3 6 89 202 283 198 283 0.91 2 2 6.7 4.1e+03 -1.6 0.0 51 62 318 329 300 338 0.67
Sequence Information
- Coding Sequence
- ATGAATCTTCACGCTTTTCAAAAAGTGGCAGAAGTCGCTTCCAATGCATTTTTGTCTTCCACAACTCGGAAAACAAATTCCATGGAAAAAGTATATTGGGACCTTGTCTTGTCGAGGACAAAGCATGTCTGTGTAAACGCAGCTTCCATAGACACGGGTGCCGCAGATTATGGGTTCCCAAATAATGATTCCACCGACCATTATAGTAGACATCCTTGGAACTTGAAGTGTATCGGTAGGGAGATACAGAACATGTTAAGTTTCCTGGGTCCCGTGGTTGGAATGACTGCGCGCCCACATTACATCTGGGAATGCTGTTCTCGACGAGTTGCTGGTACAGAGACCCTCATGGCCTCCCATGGATTGGGTATATGCATAGTGGAAAGAAGAAAGTATGGTATGGCATCGACGATTCGCAAAGCGATACATTTCGGAAAGCAGTGGAACGCTTGTGCCCGGCAAGCGTCCAAATATGGTTTATGCAAAGTTATACCACCTGATGGATTCACACCACCCTGTAATCTTGATGGGACTATGAACTTTAATGTAACCAACCACTACGTGCAACGGATGTTCAAACGATATGGGCCAGCTGCCAAAAAGTTGAGCACTTTCAAAGCCGTCTTGGCGTCGCAAAAAGTGACATTTAGGCGACCGCCACTACTAAGCGGCTTGGAAGTGGACTTACCATATTTATTCAAGCTAGTACAGCAAATGGGTGGCCTAAAGAAGCTAACAAAAATAGTACAATGGAACAAAGTTGCCGAGCAATTAAAGTGTTGTAATAATTTAAAAAATCCCGGTCAAAAAATTAAACAAATTTATGAAAAATATCTACTAACATATGAAGTGATGACAACGTTGGAGAATGAAAATTTGATAGAACAAGTGGAACGTGCGAAAGAAGTCAATCAAGGATGTTTAACCGTGCACGAAGTCCTTTGCAGGCATAAAAGCAAATGCTGGAGCCAGGTGATTCGACAGATAATTATTCGTCTGATGAAATCCCGACAAAAGATCGTTTAG
- Protein Sequence
- MNLHAFQKVAEVASNAFLSSTTRKTNSMEKVYWDLVLSRTKHVCVNAASIDTGAADYGFPNNDSTDHYSRHPWNLKCIGREIQNMLSFLGPVVGMTARPHYIWECCSRRVAGTETLMASHGLGICIVERRKYGMASTIRKAIHFGKQWNACARQASKYGLCKVIPPDGFTPPCNLDGTMNFNVTNHYVQRMFKRYGPAAKKLSTFKAVLASQKVTFRRPPLLSGLEVDLPYLFKLVQQMGGLKKLTKIVQWNKVAEQLKCCNNLKNPGQKIKQIYEKYLLTYEVMTTLENENLIEQVERAKEVNQGCLTVHEVLCRHKSKCWSQVIRQIIIRLMKSRQKIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206326;
- 90% Identity
- iTF_01206326;
- 80% Identity
- iTF_01206326;