Basic Information

Insect: Pieris napi
Gene Symbol: -
Assembly: GCA_905475465.1
Location: FR997701.1:4850789-4865085[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.39 33 5.6 3.5 1 20 194 213 194 216 0.83

2 31 0.00029 0.025 15.4 0.4 2 20 253 271 252 273 0.93

3 31 0.00026 0.022 15.6 0.2 2 23 299 321 298 321 0.95

4 31 5 4.3e+02 2.1 0.7 2 14 341 353 340 361 0.79

5 31 0.0006 0.052 14.4 0.9 1 23 371 393 371 393 0.98

6 31 0.0019 0.17 12.9 0.6 1 23 411 433 411 433 0.96

7 31 0.00012 0.011 16.6 1.7 1 23 472 495 472 495 0.97

8 31 0.00014 0.012 16.4 2.0 2 23 537 559 537 559 0.97

9 31 0.0098 0.85 10.6 0.5 1 23 609 633 609 633 0.97

10 31 0.0007 0.061 14.2 0.3 1 23 688 710 688 710 0.98

11 31 0.013 1.2 10.2 5.4 2 23 722 743 721 743 0.96

12 31 0.028 2.4 9.2 1.5 2 23 755 776 754 776 0.96

13 31 0.00067 0.058 14.3 0.6 1 23 786 808 786 808 0.98

14 31 0.12 10 7.2 5.3 1 23 837 859 837 859 0.96

15 31 0.0018 0.16 13.0 3.6 1 23 870 892 870 892 0.97

16 31 1.6e-05 0.0014 19.4 1.2 1 23 900 922 900 922 0.98

17 31 0.0007 0.06 14.2 0.2 2 23 942 964 941 964 0.97

18 31 0.7 61 4.8 0.5 1 23 982 1004 982 1004 0.91

19 31 0.27 24 6.1 3.6 1 23 1011 1033 1011 1033 0.96

20 31 0.00048 0.041 14.8 4.6 2 23 1044 1066 1043 1066 0.95

21 31 0.00095 0.082 13.8 0.2 2 23 1089 1110 1088 1110 0.95

22 31 9 7.8e+02 1.3 0.3 2 20 1114 1132 1113 1133 0.82

23 31 2.8 2.4e+02 2.9 3.4 2 23 1153 1175 1152 1175 0.94

24 31 0.0011 0.092 13.7 0.4 2 23 1191 1212 1190 1212 0.95

25 31 0.51 44 5.2 4.6 3 23 1220 1240 1218 1240 0.96

26 31 0.002 0.17 12.8 1.8 2 23 1251 1273 1250 1273 0.95

27 31 0.84 73 4.5 4.5 2 23 1290 1308 1290 1308 0.92

28 31 0.2 17 6.5 3.6 2 21 1312 1331 1312 1332 0.94

29 31 0.0035 0.3 12.0 0.4 2 23 1412 1434 1411 1434 0.96

30 31 9.8 8.5e+02 1.2 0.8 2 23 1450 1468 1449 1468 0.68

31 31 1.4 1.2e+02 3.8 3.0 2 20 1472 1490 1471 1492 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.39	33	5.6	3.5	1	20	194	213	194	216	0.83
2	31	0.00029	0.025	15.4	0.4	2	20	253	271	252	273	0.93
3	31	0.00026	0.022	15.6	0.2	2	23	299	321	298	321	0.95
4	31	5	4.3e+02	2.1	0.7	2	14	341	353	340	361	0.79
5	31	0.0006	0.052	14.4	0.9	1	23	371	393	371	393	0.98
6	31	0.0019	0.17	12.9	0.6	1	23	411	433	411	433	0.96
7	31	0.00012	0.011	16.6	1.7	1	23	472	495	472	495	0.97
8	31	0.00014	0.012	16.4	2.0	2	23	537	559	537	559	0.97
9	31	0.0098	0.85	10.6	0.5	1	23	609	633	609	633	0.97
10	31	0.0007	0.061	14.2	0.3	1	23	688	710	688	710	0.98
11	31	0.013	1.2	10.2	5.4	2	23	722	743	721	743	0.96
12	31	0.028	2.4	9.2	1.5	2	23	755	776	754	776	0.96
13	31	0.00067	0.058	14.3	0.6	1	23	786	808	786	808	0.98
14	31	0.12	10	7.2	5.3	1	23	837	859	837	859	0.96
15	31	0.0018	0.16	13.0	3.6	1	23	870	892	870	892	0.97
16	31	1.6e-05	0.0014	19.4	1.2	1	23	900	922	900	922	0.98
17	31	0.0007	0.06	14.2	0.2	2	23	942	964	941	964	0.97
18	31	0.7	61	4.8	0.5	1	23	982	1004	982	1004	0.91
19	31	0.27	24	6.1	3.6	1	23	1011	1033	1011	1033	0.96
20	31	0.00048	0.041	14.8	4.6	2	23	1044	1066	1043	1066	0.95
21	31	0.00095	0.082	13.8	0.2	2	23	1089	1110	1088	1110	0.95
22	31	9	7.8e+02	1.3	0.3	2	20	1114	1132	1113	1133	0.82
23	31	2.8	2.4e+02	2.9	3.4	2	23	1153	1175	1152	1175	0.94
24	31	0.0011	0.092	13.7	0.4	2	23	1191	1212	1190	1212	0.95
25	31	0.51	44	5.2	4.6	3	23	1220	1240	1218	1240	0.96
26	31	0.002	0.17	12.8	1.8	2	23	1251	1273	1250	1273	0.95
27	31	0.84	73	4.5	4.5	2	23	1290	1308	1290	1308	0.92
28	31	0.2	17	6.5	3.6	2	21	1312	1331	1312	1332	0.94
29	31	0.0035	0.3	12.0	0.4	2	23	1412	1434	1411	1434	0.96
30	31	9.8	8.5e+02	1.2	0.8	2	23	1450	1468	1449	1468	0.68
31	31	1.4	1.2e+02	3.8	3.0	2	20	1472	1490	1471	1492	0.92

Sequence Information

Coding Sequence: ATGGCTCTTAAGCTTGGAAAATGCAGGCTTTGCCTCAAACTTGGGGATTTCTACTCAATCTTTGCCGTCGATAATAATTTGCAACTCGCCGAAATGGTCATGGAATGTGCACGGGTTAAAATACAAGAAGGGGATGGTCTTACAGATAAAATATGTGGAGAGTGCGTACAAAAATTGAGTAGTGCGCATATATTTAAGCAACAATGTGAAAGATCGGACCAAGAATTACGAAGAAATTATGTTCCACCGCCAGGTTTTATTTCATCAACACCACCGCCAATTAACAGGCAGAGCAGTGACTCAGCTTTCTCTAATCACACGGATACTTCTAAACTATCTTCTACCGGCGAAAGTAAAGTTAAGCCGATCAGTAGAATTCGTAAAAGAAGTAGGGATAGCATCGATAATGCATCCAGTAGCAGTATCTCCCATGAATACCAACCTGTTAGTTCTAAGAGAGTTGAAGAACTACGAAAGTCTAAAAAAATTAGAAAAATTCAGGACAATGATGACTCTGATTTCGAAGATAACACTACCTCTTTCTTCTTTGGTGGAACAGATTCTGATGAACCTCTTGAGTTTAAGTGTGACATCTGTTCTAAATCGTTTAAAGCCTATCTAAGCATGATTTCTCATAAAAAATGTCACAGTCGTAGGGATAGGCAATCGGCTATGGCGGCATCCTCGACTACGGCTGTGACTCCAACTCCTGAAATTGTAACTCAGATAGCTGATGTCAAGGATGAAGACAAATCTAAGTGTGAGACCTGCGGAAAAACATTTAAATTAAAAATTATGTTAAAGCGGCACTATGAAGTTTGTGGTAAACTTATTGATAAAGAACTTAAAGTATCGTTAGAACCAATAGACGCGGTTCCCAATGAAAATAAACTTAATTGCGAAACGTGTTTAGCTCCGTTTAAAACTATAGACAATTTAAGAAAACACATGAGAGTTGTGCATGCCGCAGTTCTTAAAATGGAAGAACCTCTGTCAGTGGAGAATAACAAAATATCCGTACCATGCTTCTATTGTCAAAAACCATTTGAAGACTTTTATACCCATTCTGCTCATTTTAAAGTTTGTCCAAACAGAGATGATACTCTTACTTTTGTCTGTACGGTATGTAATAAATCACTTGTGAAAAAGGCAAGCTACTTTAACCATTTGAAGGTTCATTTTTATCCATTGGCTAAGGTAAAGCCAAACAAATCCCCAATTCCAAAAGCATACACGTGCCGCTTTTGCAAAAAAAAATTGCCAAATCAGGAATCCCTGATAAAACACCTTGCTGCGCACATGTCTAATGTTGAAGAACCCGATGATGGTGGCGATGAAGAATCTAGGAGTACCTTGGAGGATTCTGCTTCTTTACACTCAGAGTATAATAACTCTTCAATAATGTCTGGTCCATTCAAATGTACGACGTGCGATAAAGGCTTCAAGTATAAAAAGGCTTTAGACACACACCAGATAGTAAAACACTCAAATGTAAGTGTTAAAGTTGAACCCCCAGATATATCCTCAGATCTGCTGAGTGAAACATTGAACGATCATAATGTTAATCAATCCGATTCTGAGTCCAGCAATGGTGAAGGCGATGACAACACGTGTGACATCTGTGAGAAACAGTTCTCCTACAAGCGCTTACTCATTAATCACAAGCGAACGAAACACAACATGAGCTCGGGAACAAAGAGAGCAAAGGTCAGCCTAAAGCAATGTCTAGTGCGCTGTTTAATATGTGACATTGAGATGAAAGTTGAAGCTATAAATGACCATAACATGAAGCACATATCCACAAACGTAAAACCTCGCAATCTTTACACTTGCGTGGATTGCCCGGACCAGCAGTTTAAAAGCTGCAGTGCCCTAGCTAATCACATCAAAATGGTGCATAGATTGAATCAACCGGCAACTAAACCGCAAACGAACATTCCTGTAGATCCTCCGGATATGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACAGTGTCGGGAGTCACAACGACTTTGGGGAAGGCTCCGCCTATGCGACTGTTGATGGATTTACTTGTCCCACCTGCAGCAAAGTTATGCCGACACTCATCTCCCTAAAGAGACATATGAACTGGCACACAAACGTCGGAAATAATATTGAAAAGAAGTTGGAGTGTTTTGTATGCCAAGAGACATTTAGATTCCAGTGCCATTACAAAATTCATATGAAAGAACATTATAACGACCCAAACCTTGATCCTAAACACTTGACTTGCCCCATCTGTAATAGGAAAAGCAAGCATCTCCGTGCTGCGCAAATGCATATGAATTACCATAAACAGACTCGATTTAAGACCAAAGACTATGAGTGTTCCATTTGTAAGAAAGTCTTTCAAACTAGAAGAGTCTACCTGACTCATATGGCTATCCATTTCAAACGAGGGGAATCGGCAAACAACACAGTAATCGGATCTGTATTACCCACCACTGCTGATAAGACTGCCTTCGATGGAACTCATACTTGCAAAATATGCAATAAAGTATGCGAATCTGAAGCCTCGCTTAAATGCCACATGAGCTGGCATAATTCTAAAACTTTACTGTATGGAGCACGTCACGAGTGCGATATATGTCACTTACAATTCACCAACAAAGTTCGGCTCAAAGTCCATGAGCGATCTCACTTCGAAGACGAAAATGGTCCCTATAAGTGTCATATTTGCGGAAAAGGTTTTATTGCGGAAGATTATTTCCGAAGACATATTAAAGGACATAATTTCGACCATCAGTCACACAAAAAACGAATCGAAAAGCTCAGAAAGGGTAAAGTGAAGTGCCCAATCTGCACTAGGTTCTATCCGGATGTGGTCAAACTGATACGTCACTTGCGCCGAACTCATCCCCAGAGCAAAATGATCAAAGAAGATCCGGACGCTCCGCCTCAAATGTACTACCCGTGCAAATTATGCGCCAAAGTGTTCCTTGACGAGCGCAGATTGCAACACCACGAAGAGGCGCATTTGCGTAAGCCCGAATTTTTCAAGTGTAAATTCTGCGGAAAGAAGACCATTTCTCTGAAAAGCCATAGAATCCATATTAAAGGACATTTGACTCAGAAATACATAGACGAGCCACTGAAGTGTCAGCATTGTGATAAAACGTTCTCTCGCGGTTACGATCTTCATTATCACTTACGTGACTCACATAACATCGAAGAAACCTGGATCGCTGAGAGAAATAGTCAAAACCTTAATGGACCTCTTAAAGAACTACAATGCTCCATCTGTTTTAAAGTTCTTGCCAGTAAAGGAAACTATGAAAGACACATCGACTACCATAATTCCCTTCGATGCAACTACTGCTTCGATTACTTTAGCACTCTAAGGTTTTTGGAGGGACACTTAGCGTTCAGCTGCGAGAAGAAAAAGCTAATCGGCGATACCGAGATTTACCCAAGAAAGGTTAAATGTGAAATTTGTTATAAGGCATTCCATTTACAAGTAAAGTTGGATTGCCATTTGCGAACTCAACATGGAGTAAAATCTTTCAAGGAGGCAACTGAAAGTAAGAAGGACCTCGTGTGTGACTATTGCTTTAGAGTTTTCGAGAATGAGTATGCATTGACCAACCATAAACTTTACCATAGAACTATTGGGTATTTTGGATGCTTATACTGTAACAGGAAGTTTAACACCTTGACGGTTTACAGAAAACATAAAAATCACCACTTCGCACAACTTAACGTAGAGAACCCTACAAAGTGCGAGCACTGCGATAAAACATTTGTAGCTTTCAGAGAGTTCATATACCACATGCGGGACGACCACGGCGATGATAAGGAGTGGGTCGTATACCCAAAGGAGTCAATCGAAGAAAAGTGCAACATTTGCAACAAAATGTTTTTTAACTTGCATCGGCATCTTTCTTATCACGAGGAAAATAGATGTAAAAAATGCGGGGAGTACTTTTACTCGCGAACCGATTTTGATAATCACATTTGTCATATCGATAGTGAAGATGAGGTCGACGGCAACGTTGAGAATGATATTCGACCAAAATATGAGGAATGCAAATTTTGTTTTAAACCGATAACTCAGAAAACTAAAAAGAAACATGATCAATTACATAAAGGATCCGGTTCAATATCGTGTAGGTTCTGTATTCTTAAGTTCAAAACCATTGACGCTTTCAACATTCACGCGTTTTCTCATCGAAGTCGAAAGTATAAGAAACATCCTATACGATGTCGTATTTGTAAAGAGCAATTTGTTCAATATGGTCCTTTCATGCGCCACATGAAGTCTGTACACAAATCTACTAAGAAGATGCATTATAGAACTACAGTTAAGCCTGAAAAATGTGAAGTATGTGGCGATAATTTCCCGAATCTACACAACCACTATCGAGCTCATTTGTTAAATCAGTGTCAGCTATGTAGCAAATACTTCACTTCTAGTAAAGTGTTTTCACAACACACGTGCGATAAAGAAGATAGTGATCCTACGAAAGTGTTTATAAGCGATGCCAATCTTCCGTTACTTATTAATACCTATATTCCATTGGATGAAAAAGATGACGAAAAGTACTATGGATATGGTGAAGACGAAGATGAAGCAGATGATGACAACGAATTGCCTCAAAATGAAGACAGTCAAAACTCAATAGATACGGCTGAAAGCTCACTGCACGAGATGGTACATGCGCCAATCATTTCTGATGTGCTCTCCTTGTATGAGAGAAAAGAGGTTATTAATGTCGAAGAGGTGGAAAAGAAAGATGATAATTGTATCGTTGAACTTACGGATGACGACTCCGTTGGTTATCAAGAGAATCCTTCTTCAGTTATTACTATTGATGACGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFAVDNNLQLAEMVMECARVKIQEGDGLTDKICGECVQKLSSAHIFKQQCERSDQELRRNYVPPPGFISSTPPPINRQSSDSAFSNHTDTSKLSSTGESKVKPISRIRKRSRDSIDNASSSSISHEYQPVSSKRVEELRKSKKIRKIQDNDDSDFEDNTTSFFFGGTDSDEPLEFKCDICSKSFKAYLSMISHKKCHSRRDRQSAMAASSTTAVTPTPEIVTQIADVKDEDKSKCETCGKTFKLKIMLKRHYEVCGKLIDKELKVSLEPIDAVPNENKLNCETCLAPFKTIDNLRKHMRVVHAAVLKMEEPLSVENNKISVPCFYCQKPFEDFYTHSAHFKVCPNRDDTLTFVCTVCNKSLVKKASYFNHLKVHFYPLAKVKPNKSPIPKAYTCRFCKKKLPNQESLIKHLAAHMSNVEEPDDGGDEESRSTLEDSASLHSEYNNSSIMSGPFKCTTCDKGFKYKKALDTHQIVKHSNVSVKVEPPDISSDLLSETLNDHNVNQSDSESSNGEGDDNTCDICEKQFSYKRLLINHKRTKHNMSSGTKRAKVSLKQCLVRCLICDIEMKVEAINDHNMKHISTNVKPRNLYTCVDCPDQQFKSCSALANHIKMVHRLNQPATKPQTNIPVDPPDMADFCEVVVTKAEPLDSVGSHNDFGEGSAYATVDGFTCPTCSKVMPTLISLKRHMNWHTNVGNNIEKKLECFVCQETFRFQCHYKIHMKEHYNDPNLDPKHLTCPICNRKSKHLRAAQMHMNYHKQTRFKTKDYECSICKKVFQTRRVYLTHMAIHFKRGESANNTVIGSVLPTTADKTAFDGTHTCKICNKVCESEASLKCHMSWHNSKTLLYGARHECDICHLQFTNKVRLKVHERSHFEDENGPYKCHICGKGFIAEDYFRRHIKGHNFDHQSHKKRIEKLRKGKVKCPICTRFYPDVVKLIRHLRRTHPQSKMIKEDPDAPPQMYYPCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKSHRIHIKGHLTQKYIDEPLKCQHCDKTFSRGYDLHYHLRDSHNIEETWIAERNSQNLNGPLKELQCSICFKVLASKGNYERHIDYHNSLRCNYCFDYFSTLRFLEGHLAFSCEKKKLIGDTEIYPRKVKCEICYKAFHLQVKLDCHLRTQHGVKSFKEATESKKDLVCDYCFRVFENEYALTNHKLYHRTIGYFGCLYCNRKFNTLTVYRKHKNHHFAQLNVENPTKCEHCDKTFVAFREFIYHMRDDHGDDKEWVVYPKESIEEKCNICNKMFFNLHRHLSYHEENRCKKCGEYFYSRTDFDNHICHIDSEDEVDGNVENDIRPKYEECKFCFKPITQKTKKKHDQLHKGSGSISCRFCILKFKTIDAFNIHAFSHRSRKYKKHPIRCRICKEQFVQYGPFMRHMKSVHKSTKKMHYRTTVKPEKCEVCGDNFPNLHNHYRAHLLNQCQLCSKYFTSSKVFSQHTCDKEDSDPTKVFISDANLPLLINTYIPLDEKDDEKYYGYGEDEDEADDDNELPQNEDSQNSIDTAESSLHEMVHAPIISDVLSLYERKEVINVEEVEKKDDNCIVELTDDDSVGYQENPSSVITIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01206751;
90% Identity: iTF_01206751;
80% Identity: -