Pmel011836.1
Basic Information
- Insect
- Pieris melete
- Gene Symbol
- GATA-B
- Assembly
- GCA_963693345.1
- Location
- CAVNZK010000055.1:919704-935149[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8 4.8e+03 -2.0 0.0 7 14 223 230 222 233 0.84 2 3 7.4e-17 2e-13 50.4 3.6 1 34 259 291 259 293 0.97 3 3 7.6e-19 2.1e-15 56.7 5.9 1 34 312 344 312 346 0.97
Sequence Information
- Coding Sequence
- ATGCTGCACGAGACGTGGCCTGAGGCCTGCCGGCTCCGCGGCCGAACCAACTACAACACCCTGGCCGATTTCATTGCTGAGGTTAACAACAACGAACGAAAAGAGGGCGCGGAGGGTACAGGAGGTGCGGAAGGCGCGGCGGGCGGGGGCGGGTCTCCGGGCGCGCGAAGCTATGAGGAACTGCGACCGCCAGTCGCGCGCGACATGCAGACATACGTGCACCTGGAGGAGGCGCTGTTTAAGGCGGGGGGAGAATACATGCATCGCAGTCCCGACCTAACACCCTCGCCCGAACGCCGCGAGGATTCCTACCGCACGATGCACTACGAGCCCTACTCACCGCCGTCCGCGCCGCCACCATATCACCACCTCGACAATGGCGGCGTAGCGGAGAGCAGCGTTAGCGGCGGTGGAGCGTATGCGCGCTGTGCTGGTTACGCCAGTGGCAACACAACGTACTACAGCGGTGGCAGCGAAATTGGACAGTCACAAACATGGGGTGGTTCATCACCCGTCTATTGTGGCAGCACTGTACTTGGTGATTATGTGGAAGGCGAAAGTGGAGGCGAACCCGCCAGTGTTGGAGCACTTCCCCCTTTTAGTACGCGTTTCGGTAGCGCCTATGCCTCCACATCGCGCGCTTCCGCCACTGCGCCTACTGCCTACACGCAATCCGAGCTTTGGCGTGCCGAGTGCGTCTATAGGCCTCAGCTGTCCGCCGCCGCCAGTCTTTCTGCCATGGAGCTGGCTGAGGTGGTGACGGATAGCCGAGAGTGCGTCAACTGCGGCGCCGTGCACACACCGCTGTGGCGCCGCGACGGCACTGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCCCGGCGGCTGATGGGTACGAAGCGGCCAGGTATGTCGTGCAGCAACTGTCAAACCACTACAACGTCATTGTGGCGTCGCAACGCTCATGGTGAAACAGTGTGCAACGCTTGTGGGCTTTATTACAAACTGCACAACATCCCACGCCCCATCGCCATGAAGAAAGACTCAATACAGACACGCAAGCGCAAACCCAAGAACAGTATGAAGGCGGAACGTCACTTAAGCAAGAGTATAGTGCACGCTGCGCACGCGGTGCAGCACGCCCCCCGCGCCCACCCCCCGCACACTGCACACTCGCCGCACAATTCGCACGCGCCGCACTCCATGTCGTCTTCCGTCGAAGTTAAAAACAACtGGCTGACGGAAAGGTTGGTGTCGGCTATACAAATGCAGGATATCAAGGAAGAGCGTGACGTCAAAGTAGAGAACTACGGATACGGCGGTCCCGTGAAGGTTGAAGAACCGCCACCAGCACACGCACACTACGCGTCGCCGCTTCACTCACACACGCACGCCCACGCgcatacacacgcacacacacacaagGAGTACTACGAGGAGGCGGCGTATGCGCACGCAGCGGACCCCGAACGGCCCACCGTTGTATCTATGGGCAGCTGA
- Protein Sequence
- MLHETWPEACRLRGRTNYNTLADFIAEVNNNERKEGAEGTGGAEGAAGGGGSPGARSYEELRPPVARDMQTYVHLEEALFKAGGEYMHRSPDLTPSPERREDSYRTMHYEPYSPPSAPPPYHHLDNGGVAESSVSGGGAYARCAGYASGNTTYYSGGSEIGQSQTWGGSSPVYCGSTVLGDYVEGESGGEPASVGALPPFSTRFGSAYASTSRASATAPTAYTQSELWRAECVYRPQLSAAASLSAMELAEVVTDSRECVNCGAVHTPLWRRDGTGHYLCNACGLYHKMNGMNRPLKQPRRLMGTKRPGMSCSNCQTTTTSLWRRNAHGETVCNACGLYYKLHNIPRPIAMKKDSIQTRKRKPKNSMKAERHLSKSIVHAAHAVQHAPRAHPPHTAHSPHNSHAPHSMSSSVEVKNNWLTERLVSAIQMQDIKEERDVKVENYGYGGPVKVEEPPPAHAHYASPLHSHTHAHAHTHAHTHKEYYEEAAYAHAADPERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01207017; iTF_01204528; iTF_01206192; iTF_00879289; iTF_01202913;
- 90% Identity
- iTF_00879289;
- 80% Identity
- -