Lari007248.1
Basic Information
- Insect
- Leptophobia aripa
- Gene Symbol
- GATA-B
- Assembly
- GCA_951799465.1
- Location
- OX637269.1:6486048-6497436[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-17 1.1e-13 50.5 3.9 1 34 258 290 258 292 0.97 2 2 5.5e-19 1.3e-15 56.7 5.9 1 34 311 343 311 345 0.97
Sequence Information
- Coding Sequence
- ATGTTGCACGAGACGTGGGCTGAGGCCTGCCGGCACCGCGCCCGGTCTACTTACAACACCATCGACGACTTCATTGAAGAGGTTAACAACAACGAACGAAAAGAGGGCGCGGAGGGCACAGGAGGTGCGGAAGGCGCGGCGGGCGGGGGCGGGTCTCCGGGCGCACGAAGCTATGAGGAACTGCGGCCGCCAGTCGCACGAGACATGCAGACATACGCGCACCTGGAGGAGGCGCTGTTTAAGGCGGGCGGGGAGTATATGCACCGAAGTCCCGATTTAACACCCTCGCCCGAACGACGCGACGATTCATACCGCACGATGCACTATGAGCCATATTCACCGCCGCCCGCGCCGCCGCCGTATCACCACCTCGACAATGGCGGAGTAGCGGAGAGCAGCGTAAGCGGCGGGGCAGCGTATGCGCGATGCGGTGGATACGCGAGTGGCACAACATACTTTAGCGGCGGTGGAGAGCTTGGACAACCACAGACATGGGGAGGCTCATCACCTGTGTACTGTGGGAGCACTGTACTTGCTGACTATGTGGAAAGTGAAAGTGGAGGCGAACCCGCCAATGGTGGAGCGCTTCCCGCATTCAGCGCGCGTTTCGGTGGAGCGTTTGCGTCCACGTCACGCGCTGCCGCCACCGCACCAACTACCTACACACAGCCTGAATTGTGGCGTGTCGAGTGCAGCTACCGGCCTCAACTTTCCGCCGCCGCCAGCCTTTCTGCCATGGAGCTGGCGGAGGTGGTGTCAGATGGTCGCGAGTGCGTCAACTGCGGCGCCGTGCACACGCCGCTGTGGCGTCGCGACGGCACTGGCCACTACCTGTGCAACGCGTGCGGCCTCTATAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGAGGCGGCTGATGGGTACGAAGCGGCCAGGTATGTCGTGCAGCAACTGTCAGACTACCACAACGTCACTGTGGCGTCGCAACGCTCACGGTGAGACCGTTTGCAATGCTTGTGGCCTTTACTACAAGTTGCATAACATCCCGCGCCCAATTGCCATGAAGAAAGACTCAATACAGaCACGCAAGCGCAAGCCCAAGAACAGTATGAAGGCGGAACGGCACTTAAGCAAGAGCATCGTACACGCTGCGCACGCGTCGCAACATGCCCCACGTGCCCATCCCCCCCACAACGCACACTCACCACACAATTCGCACGCGCCCCATTCTATGGCACCCACCGTCGAGGTCAAAAACAACTGGCTGACGGAAAGGTTGGTGTCAGCGATACAAATGCAGGATATCAAAGAAGAGAGAGAGGTGAAGGTAGAGAGCTACGGCTATGGTGGTCCCGTTAAGGTTGAGGAACCTCCACCAGCCCACGCACACTACGCGACGTCGCTGCACGCACACCCGCACGCCCACGCGCATACACACGCGCACACACACAAGGAGTACTACGAGGAGGCAGCGTATGCACACTCGGCGGACCCCGAACGTCCCACCGTCGTGTCCCTGGGCAGCTGA
- Protein Sequence
- MLHETWAEACRHRARSTYNTIDDFIEEVNNNERKEGAEGTGGAEGAAGGGGSPGARSYEELRPPVARDMQTYAHLEEALFKAGGEYMHRSPDLTPSPERRDDSYRTMHYEPYSPPPAPPPYHHLDNGGVAESSVSGGAAYARCGGYASGTTYFSGGGELGQPQTWGGSSPVYCGSTVLADYVESESGGEPANGGALPAFSARFGGAFASTSRAAATAPTTYTQPELWRVECSYRPQLSAAASLSAMELAEVVSDGRECVNCGAVHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLMGTKRPGMSCSNCQTTTTSLWRRNAHGETVCNACGLYYKLHNIPRPIAMKKDSIQTRKRKPKNSMKAERHLSKSIVHAAHASQHAPRAHPPHNAHSPHNSHAPHSMAPTVEVKNNWLTERLVSAIQMQDIKEEREVKVESYGYGGPVKVEEPPPAHAHYATSLHAHPHAHAHTHAHTHKEYYEEAAYAHSADPERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205362;
- 90% Identity
- iTF_01202913; iTF_01204528; iTF_01207017; iTF_01206192; iTF_01205362;
- 80% Identity
- -