Pmel021798.1
Basic Information
- Insect
- Pieris melete
- Gene Symbol
- Rel
- Assembly
- GCA_963693345.1
- Location
- CAVNZK010000325.1:1474314-1508237[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-34 6.8e-31 108.2 0.0 1 168 56 225 56 226 0.88 2 2 1.7 5.8e+03 -2.2 0.1 51 114 577 640 571 656 0.73
Sequence Information
- Coding Sequence
- ATGTCGTCGAGTGAACACGATATGAGTGATGTTTCAAACTTGGAGTCTCCTTATTCTCGTGGATCTCAGTATTCACCATATTCATCACCAACACGTATGGTTCCCAACCTGGCCAATGGATTTACGGAACTGAGGTGTGACGATGGTTATACAGATAAGCCATATCTCAAAATTATTGAACAGCCCATGGATTACTTTAGATTTCGGTATAGAAGTGAAATGTTGGGAACACATGGTTGTTTGCTTGGAAGGAACTCAGTTTCTGGAAAACTGAAGACTCATCCAACTGTTGAGCTATGCAACTATACAGGTAGCGCAATAATAAGATGTAATCTGGCCCGACATAATGATGCCACGGATCATCCACATAAACTTACAGATGAAGACCAAGATAGGGAGGTGTTCAGTAATGTTCCAACACAAGGCTCTTATAAAGTTGGattCAATGGTATGGGTATAATACACTCTGCAAAGAAAGATATACCTACTTTATTATACAAGAAGTATTCAAAAGATATGGAACAATCTGAATTTAATGAACGCAAGttgcGCATGCGCTGCGAGGCAGAAACGAAAAATATTAACCTGAATATTGTGAGGCTCAAGTTTACTGCACATGATGTTAACTCTGGTGAACTGTTGTGCCCTCCAATTTTCTCTGATCCAATTCACAATATGaATTTGGATACATGTACATGTTATATCTTTGTTGATTACATTATGGCGTCAAAAAAGAGCGTGGCTTGGGATCATTTTGAAGACAAGGGCATAGGCAAAGCTCAATgcaagtattgcaaaatagATATATCATATAAGTCCTCAGTCTCCAATTTAACAAAACACATATATAGAAAACATGGCACTATACAGTTAGTACCCAGGCAAGGCGTTTCAGCTACTGCTGGTATGACAAAGAGGCAGGCTGCAGCTTCTGGTACTGATGCATTAACGCAACTGCAAGAAAGTGCAGCAACCAATGATCCAAAGATATGCCGAGTCAGTAAAAGATTTGGCAAGGCCAAGGGGGGAGACCAGGTTTTCATATTTGTGGAAAaagtcagcaaaaaaaatattatgatacgTTTCTTTGAATTGAACGAAGATGGGGAGCGGGTGTGGGAGACGTTCGCCAGTTTTCAAACGTGCGATGTTCATCACCAATACGGTATCGTCTTTACAACACCAGCATATCGTCCAACTTCGAAAAACGTGAAAGTATTCTTCGAGTTGCTGCGACCGTCCGATGGTCGTACCAGCGAACCCAAAGAGTTCCACTACATAGCTGACTTCTGCAGCAGAGAGAAGAAAAGAAAGGCTGAGTCTTCTTACTCTTCTATTAGCTCAGGTGGCTCAATTAAAAGCATCAGCGATTTGCCGCTGACAATCGACTTTGTTAACGTACCACCCACCCCTCCATCAAACTTGGATGTTATGATGGGAGACGCACTCCTATACAACGTGTCTCAGCCGGCAGCGCCGCACTACGAGAGTCCTATGCTGGGCCAACCAAATGTGCCGCCACCACCAGTCATACAACTCGACTCGACTGAAATGAACCGCCTGCTTGAAGACTGTCCTCACATACCGTCTGAAGAGCGGAAAAGATTTTTGGATTCGGACTTAAGTGAATACTTCCGGTCATTTGACGAACACCTGAACCAGCCGGGAGATATTCATGGGATGTCGTTTATCAGAAGCGCTTCATTAGTGGCTGATTCCGCACGACCGGTTGTCCGAGGCAAATGCGATACCAAAGATGATCCTGCAAAGAAGAGTCATGAAAGTATTCGGAACAAAACTGAGTATTCAGCGGTCTACAGCACTGAGGACGGGAAGGAAGTTAAAATGTTGGTAAAAGAACTTtgcgaaataataaaaagtaaaaataccaCAAAACGCCAAATTTTAAAGGAGAAACTCAGAAGACTCTTCGATCTGAGACTTGACAATGGAGATgcATTTTTACATATGACATTATGCAGTAACCAGCCCAGTTTGCAATTCATAGTCAAACTGATTCATGACTTGAAAATTACTAGTTTGCTGAACATTCAGAATGACCGGATGCAAACAGTACTCCATCTAGCAATCATCAATAATCGAGAAAATCTAATACCGTTGCTCATTTCAAATGGTTGCGACCCGATGTTGGAAGATGAGGAGGGCAACAACGCGATTCACTACGCAGTGATTTGCCGCAACTGTCTTGTGCCACTACTTAACAAAATCGAAACCTCAAATGTCTCTGTTAATATTAATGCATTTAATTACGataagcAAACAGCGCTGCATTTAAGCGCTATATACGGCTGTGAGAAGAGCGCTAGATTGCTGCTTAAAGCGGGAGCCATCAGCACAGTACGGGACAGCGAGGGACGTACACCGCTGCATTTAGCGGCGTCCAATACTAGCAGTGGGCTGGATGTAGTCAAGTGCTTAGTGGAATATATGAAACCGAGCGATATTGACACCGTAGATGGGCGTGGTCACACGGCGCTTCAAGATGTATGCGATTCGCTTCTCGGACCTCACTCGCTGCAGATAGCTAAAACATTGTTAGATAACAagGCGGACCCCACGAAATGCGATACGTCAGGTGCCATGGCCTTCAAACTGGCGAAGAATAAGCCAGAACTGATGCAGTTGTTACGTCAGTATGCAACGTGTTCCGAGGATGACATCAAATCGGAACCGGAGGATTATGAATCAGCTGATGAAGGGGAGGCAAGCGAGCTATCCGACCTTTCGCAGTACGTCCATGAAGTGGCAGCTATTTTGGATAGAAGCGGGGGTTGGCGGGAGTTAGCCAAACGTCTGCATCGGGACGCAATGATGAAGTTCTTTGAGTCTACACCTAGTCCCACCACAACTTTACTTAATAACATAAAGGAGCTGAACGATGACGTCACATCTCGATCATTGGCTCTACTATTAGATGATATGGGCGAGAAGGATGCAGCCGCCATTATCAAAAGTCGTATGATTGAGTAA
- Protein Sequence
- MSSSEHDMSDVSNLESPYSRGSQYSPYSSPTRMVPNLANGFTELRCDDGYTDKPYLKIIEQPMDYFRFRYRSEMLGTHGCLLGRNSVSGKLKTHPTVELCNYTGSAIIRCNLARHNDATDHPHKLTDEDQDREVFSNVPTQGSYKVGFNGMGIIHSAKKDIPTLLYKKYSKDMEQSEFNERKLRMRCEAETKNINLNIVRLKFTAHDVNSGELLCPPIFSDPIHNMNLDTCTCYIFVDYIMASKKSVAWDHFEDKGIGKAQCKYCKIDISYKSSVSNLTKHIYRKHGTIQLVPRQGVSATAGMTKRQAAASGTDALTQLQESAATNDPKICRVSKRFGKAKGGDQVFIFVEKVSKKNIMIRFFELNEDGERVWETFASFQTCDVHHQYGIVFTTPAYRPTSKNVKVFFELLRPSDGRTSEPKEFHYIADFCSREKKRKAESSYSSISSGGSIKSISDLPLTIDFVNVPPTPPSNLDVMMGDALLYNVSQPAAPHYESPMLGQPNVPPPPVIQLDSTEMNRLLEDCPHIPSEERKRFLDSDLSEYFRSFDEHLNQPGDIHGMSFIRSASLVADSARPVVRGKCDTKDDPAKKSHESIRNKTEYSAVYSTEDGKEVKMLVKELCEIIKSKNTTKRQILKEKLRRLFDLRLDNGDAFLHMTLCSNQPSLQFIVKLIHDLKITSLLNIQNDRMQTVLHLAIINNRENLIPLLISNGCDPMLEDEEGNNAIHYAVICRNCLVPLLNKIETSNVSVNINAFNYDKQTALHLSAIYGCEKSARLLLKAGAISTVRDSEGRTPLHLAASNTSSGLDVVKCLVEYMKPSDIDTVDGRGHTALQDVCDSLLGPHSLQIAKTLLDNKADPTKCDTSGAMAFKLAKNKPELMQLLRQYATCSEDDIKSEPEDYESADEGEASELSDLSQYVHEVAAILDRSGGWRELAKRLHRDAMMKFFESTPSPTTTLLNNIKELNDDVTSRSLALLLDDMGEKDAAAIIKSRMIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01202244;
- 90% Identity
- iTF_01205084;
- 80% Identity
- iTF_01205084;