Basic Information

Insect: Pieris mannii
Gene Symbol: -
Assembly: GCA_029001895.1
Location: CM054830.1:1920637-1928987[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 8.4 7.1e+02 1.6 0.1 3 23 107 127 105 127 0.93

2 17 0.11 9.7 7.5 0.2 2 23 131 153 130 153 0.95

3 17 0.022 1.9 9.7 0.2 2 23 386 408 385 408 0.95

4 17 0.033 2.8 9.2 0.1 1 20 416 435 416 437 0.94

5 17 0.016 1.3 10.2 0.7 2 23 447 468 446 468 0.92

6 17 0.039 3.3 9.0 0.4 1 23 516 539 516 539 0.93

7 17 1.8 1.6e+02 3.7 0.1 9 23 590 605 580 605 0.88

8 17 0.078 6.6 8.0 3.7 1 23 616 639 616 639 0.91

9 17 5.1e-05 0.0043 18.0 1.8 1 23 674 696 674 696 0.96

10 17 3.8e-06 0.00032 21.6 0.6 1 23 703 725 703 725 0.98

11 17 8.5e-05 0.0072 17.3 2.3 1 23 730 752 730 752 0.96

12 17 0.00028 0.023 15.7 3.4 1 23 758 780 758 780 0.98

13 17 6.9e-05 0.0059 17.6 1.8 1 23 786 808 786 808 0.99

14 17 0.00038 0.032 15.3 3.5 2 23 815 836 815 836 0.98

15 17 0.001 0.086 13.9 1.9 2 23 844 866 843 866 0.97

16 17 0.026 2.2 9.5 0.0 2 23 872 893 871 893 0.97

17 17 5.2 4.4e+02 2.3 6.3 1 23 899 922 899 922 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	8.4	7.1e+02	1.6	0.1	3	23	107	127	105	127	0.93
2	17	0.11	9.7	7.5	0.2	2	23	131	153	130	153	0.95
3	17	0.022	1.9	9.7	0.2	2	23	386	408	385	408	0.95
4	17	0.033	2.8	9.2	0.1	1	20	416	435	416	437	0.94
5	17	0.016	1.3	10.2	0.7	2	23	447	468	446	468	0.92
6	17	0.039	3.3	9.0	0.4	1	23	516	539	516	539	0.93
7	17	1.8	1.6e+02	3.7	0.1	9	23	590	605	580	605	0.88
8	17	0.078	6.6	8.0	3.7	1	23	616	639	616	639	0.91
9	17	5.1e-05	0.0043	18.0	1.8	1	23	674	696	674	696	0.96
10	17	3.8e-06	0.00032	21.6	0.6	1	23	703	725	703	725	0.98
11	17	8.5e-05	0.0072	17.3	2.3	1	23	730	752	730	752	0.96
12	17	0.00028	0.023	15.7	3.4	1	23	758	780	758	780	0.98
13	17	6.9e-05	0.0059	17.6	1.8	1	23	786	808	786	808	0.99
14	17	0.00038	0.032	15.3	3.5	2	23	815	836	815	836	0.98
15	17	0.001	0.086	13.9	1.9	2	23	844	866	843	866	0.97
16	17	0.026	2.2	9.5	0.0	2	23	872	893	871	893	0.97
17	17	5.2	4.4e+02	2.3	6.3	1	23	899	922	899	922	0.97

Sequence Information

Coding Sequence: ATGTTAGATTCCGATGAATCCGATGACGAGCCACTGTCTGTTTTGGCATCGAAGAAGTTGAATCCAGCTACTATTTTAAACGAAGGGGTATGTCAAGAAGACACTAAGACCGGGCTAATAACAAATATtggtttaaaaacaaaattaagccGTAATTCTTCTGCGACGCCAATTGTTGTGCAAAGACCTTTGGATGTGTggctatatttaaaagattttaataccACTGGCCCATTTAGTTGTTTATTATGCCCAGATTGGTTTATAAACAGACCAAAAGTTATATTGCACTATGTCCTAAATCATAAGAAGGATTTTTGCGGCATATGCAGATATTTTGTACCAGATAGACAATCTTGGATAGAACATGAAAAGTTTCATGTCCCTTGGCCTTGTTCACAATGTGTATCATCTTTTCAAAGTGAAGATTTATTGCGTGACCATTTTAGAAGTGAACACAATCTGGTACATTGTCGACTTTGCCATTTTAGAGTTTCTGCAGATAGTAATTATGATGCCCATCTCCTTCAAAAACATAATGTTACAAATGGGTCAAGTGTTTACGGAACCTTGTGGGAATTGGACCCAGATGATGCAATTTTTTCTTGTGTTCTTTGTTCCAAAACAGAAAATCTCTTGACTGCCTTCTTCAGTCATTATATGGGCTACCATCACTTTACACTAAAATGCCTCGCTAACTTAGTATCTGGGAAAGACCCACCATTTACTGTAAAAGGTGTAGACATAAGTTCACAATTTCTGGATTCAGAGTTAAGTGGTCAAACTAGATATGGCTATGTCGATTTGGAAGCACCAATGCCACAACAAACTGACGAGGCAGAAGAAACACAAATCCAGTTATCTGATCTCGTACCAGAAATAAAAACGGAAGCACACAGTGATGATGACGATATTAAAGTCCTTCAAGAAGCTAGTAAGGAGGTAAACCGAAGCGGAAGCTTAAATGAAAGTCAAAATGAAGAGTGTATTGACTATCGTGGAGAAATAGATTTTGATATTACCTTAACTGAAATTCTCCTATTAGATAAAGCTTATTTTGACTATATCtcaaaagtttataaaaatatagatgaAGGAGTGGTACCAGACTTTTCAAGTGTAGATTATGGTTGCAAATCAGATTTTACCGACTTAGaatgtaaattatgtaaagTGATTTTTGAAGATGCACCAACATTTACCATGCACATGACAAAGATGCATTCTGTAAAAACTGAGCAGTTATACTCGTGTAGGGTATGTTTAGCATCGTTTGACACAAATTATGCATTAATAGCACATACTCTTCAAGAGTTGGGTGATTTCGAAGATCTGTGGATATGTCAGTTTTGTGACAAGGAATTTAATAACAGGGAACTGACTAGACAGCATCTAACTGATCATTGGGACCAATTAGAGTTTGAAAACTGCTTTAGCCCACATCTTGGTTTTAAATGCAGACTATGTCCAATGTTATTCTGGAATGAACAAGACAGAGAATTACACCAGATAAATTcacattttgaaaaatataaagaaagttTTTATAAGTGTGAGGattgttcattaatttttgggGATAAGgtgTGGTTTGTATATCATTACATCCAGAAGCATATTAATGAACAGACCCGAGCGACctacttattaaaatgttgtttGTGTTGCCTtgttatttctaatattgAAGATATGAGGAATCATTTTGATGAATATCACCCTGAGGCTAAGAAGTTATATTGTTCACTAGACACTTGTGTGTTCCGACCCTTGAGTCAGAAGAAATCTTTAAAGGTTCATGTTAAGacgGTACATTCAACGAATCGTGATCAGAAACCGAAGGTATTCAGTTGTCATGTCTGTCAGCGACGATTTCCGAACTCTAGATCCTGCAATACCCATATTACTGCTGCCCATGGCACGGCTGGCAAGTTCAAGTGCAAATTGTGCAAAGATATGTTACAGACTGCGGATGAACGGAAACTCCACTACCTACTTCGGCACCCCGGTCGTCATCCTTTCGAATGTTCGGAGTGCGGGAAGTCTTTCCAATACAAATCATCGTTGTACATGCACAAGCAGGACCACCAACCTAACAAGCAAAGTTACACGTGTGATTATTGCGGAAAAATATTTGCCAAGAAAGACTCGTTCCGCGAGCACGTACAAATACACGAAGGCCCGCGTCACGCGTGCTCGTACTGTCCGATGCGGTTCGTGCAACGCTCGAACATGTTACGTCACGAGCGACGTCACACGGGCGAGAGGCCGTACACGTGCCCGCATTGCCCTAAGACTTTCGCCGATAAGGGGGCATGTACGTCACATTCCAGaACACATTCAAAAGATAGATCTTACGTTTGCCTATATTGTGGCCAGACATTCCTACAAAAGTCCAAACTCACCTATCACATACGGAGACATACGGGAGAAAatTTGGAGACATGCACAGTTTGCTCAAAGTTGTTCACCAGTGCTTGTTCACTTCGTGAGCATATGAAGACTCATGCGGCGAAAAATACTAAAGTCAAATGCCTCGTATGTGataaaaaataccacGATGAGCGATATATGTTACGTCATATGCGTACAATACACGGTAACAGACAATTGACATGTCCCCTTTGCCCCAAACTGGTGTCGAGTATGGCAGCACTACGGTACCACGTTTTGACACATAGCAaccttaatacatttaaaTGTAAGTGCTGCAAGAAATCATACATGGTCCGACGCACTATTGTGAAACACCTTCGCAAACGTCACGGCTTAAATGCTGCCGAAGTCAACATAAAGGAGTATTATTCAAAATTGGAGCCTAGAGAATGCAATCTGAAGATAGATGAGACTACAATGACCAGAATTTTTGGACCTCCGAAGAAAGACTCTCCAAATGTGGTTGGAGACTTTGTAACATTCACAAAGAGACTGAAATTAGCAGAGAATCTCGATCAAAATACTGATGATACTGAAGAAGCAGATCAGGTGTCAGAAGAGGAGAAGGAACCAGAGAAAGAGACTGAAACTGAAACTCCAAAAGAGAAACCACATTTCACGCAAGTGGTGTGTAAGGAAGAGGTGGTTGATCCGGAATATGATCTGGAACCCACTGATTTTGTTAGTGTTAAGATTGAACCAGTTGAGGAAGATCCTCAAGAgaataattag
Protein Sequence: MLDSDESDDEPLSVLASKKLNPATILNEGVCQEDTKTGLITNIGLKTKLSRNSSATPIVVQRPLDVWLYLKDFNTTGPFSCLLCPDWFINRPKVILHYVLNHKKDFCGICRYFVPDRQSWIEHEKFHVPWPCSQCVSSFQSEDLLRDHFRSEHNLVHCRLCHFRVSADSNYDAHLLQKHNVTNGSSVYGTLWELDPDDAIFSCVLCSKTENLLTAFFSHYMGYHHFTLKCLANLVSGKDPPFTVKGVDISSQFLDSELSGQTRYGYVDLEAPMPQQTDEAEETQIQLSDLVPEIKTEAHSDDDDIKVLQEASKEVNRSGSLNESQNEECIDYRGEIDFDITLTEILLLDKAYFDYISKVYKNIDEGVVPDFSSVDYGCKSDFTDLECKLCKVIFEDAPTFTMHMTKMHSVKTEQLYSCRVCLASFDTNYALIAHTLQELGDFEDLWICQFCDKEFNNRELTRQHLTDHWDQLEFENCFSPHLGFKCRLCPMLFWNEQDRELHQINSHFEKYKESFYKCEDCSLIFGDKVWFVYHYIQKHINEQTRATYLLKCCLCCLVISNIEDMRNHFDEYHPEAKKLYCSLDTCVFRPLSQKKSLKVHVKTVHSTNRDQKPKVFSCHVCQRRFPNSRSCNTHITAAHGTAGKFKCKLCKDMLQTADERKLHYLLRHPGRHPFECSECGKSFQYKSSLYMHKQDHQPNKQSYTCDYCGKIFAKKDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYTCPHCPKTFADKGACTSHSRTHSKDRSYVCLYCGQTFLQKSKLTYHIRRHTGENLETCTVCSKLFTSACSLREHMKTHAAKNTKVKCLVCDKKYHDERYMLRHMRTIHGNRQLTCPLCPKLVSSMAALRYHVLTHSNLNTFKCKCCKKSYMVRRTIVKHLRKRHGLNAAEVNIKEYYSKLEPRECNLKIDETTMTRIFGPPKKDSPNVVGDFVTFTKRLKLAENLDQNTDDTEEADQVSEEEKEPEKETETETPKEKPHFTQVVCKEEVVDPEYDLEPTDFVSVKIEPVEEDPQENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01203496; iTF_01205160; iTF_01206825; iTF_01205968; iTF_01202712; iTF_00879092;
90% Identity: iTF_00879092;
80% Identity: -