Basic Information

Insect: Leptophobia aripa
Gene Symbol: -
Assembly: GCA_951799465.1
Location: OX637268.1:1138794-1144327[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.5 4.7e+02 1.7 0.2 3 23 107 127 105 127 0.93

2 18 0.0036 0.22 12.1 0.2 2 23 131 153 130 153 0.96

3 18 0.016 0.99 10.1 0.1 2 23 385 407 384 407 0.95

4 18 0.031 1.9 9.2 0.1 1 20 415 434 415 436 0.94

5 18 0.004 0.25 12.0 0.7 2 23 446 467 445 467 0.96

6 18 7.8 4.9e+02 1.6 0.3 1 22 483 504 483 506 0.73

7 18 0.036 2.2 9.0 0.4 1 23 515 538 515 538 0.93

8 18 2.8 1.7e+02 3.0 0.1 9 23 589 604 579 604 0.88

9 18 0.05 3.1 8.5 3.8 1 23 615 638 615 638 0.91

10 18 4.3e-05 0.0027 18.2 1.9 1 23 673 695 673 695 0.96

11 18 3.6e-06 0.00022 21.6 0.6 1 23 702 724 702 724 0.98

12 18 7.9e-05 0.005 17.3 2.3 1 23 729 751 729 751 0.96

13 18 0.00026 0.016 15.7 3.4 1 23 757 779 757 779 0.98

14 18 6.4e-05 0.004 17.6 1.8 1 23 785 807 785 807 0.99

15 18 0.00035 0.022 15.3 3.5 2 23 814 835 814 835 0.98

16 18 0.00094 0.059 13.9 1.9 2 23 843 865 842 865 0.97

17 18 0.024 1.5 9.5 0.0 2 23 871 892 870 892 0.97

18 18 4.8 3e+02 2.3 6.3 1 23 898 921 898 921 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.5	4.7e+02	1.7	0.2	3	23	107	127	105	127	0.93
2	18	0.0036	0.22	12.1	0.2	2	23	131	153	130	153	0.96
3	18	0.016	0.99	10.1	0.1	2	23	385	407	384	407	0.95
4	18	0.031	1.9	9.2	0.1	1	20	415	434	415	436	0.94
5	18	0.004	0.25	12.0	0.7	2	23	446	467	445	467	0.96
6	18	7.8	4.9e+02	1.6	0.3	1	22	483	504	483	506	0.73
7	18	0.036	2.2	9.0	0.4	1	23	515	538	515	538	0.93
8	18	2.8	1.7e+02	3.0	0.1	9	23	589	604	579	604	0.88
9	18	0.05	3.1	8.5	3.8	1	23	615	638	615	638	0.91
10	18	4.3e-05	0.0027	18.2	1.9	1	23	673	695	673	695	0.96
11	18	3.6e-06	0.00022	21.6	0.6	1	23	702	724	702	724	0.98
12	18	7.9e-05	0.005	17.3	2.3	1	23	729	751	729	751	0.96
13	18	0.00026	0.016	15.7	3.4	1	23	757	779	757	779	0.98
14	18	6.4e-05	0.004	17.6	1.8	1	23	785	807	785	807	0.99
15	18	0.00035	0.022	15.3	3.5	2	23	814	835	814	835	0.98
16	18	0.00094	0.059	13.9	1.9	2	23	843	865	842	865	0.97
17	18	0.024	1.5	9.5	0.0	2	23	871	892	870	892	0.97
18	18	4.8	3e+02	2.3	6.3	1	23	898	921	898	921	0.97

Sequence Information

Coding Sequence: ATGTTGGATTCTGACGAATCTGATGATGAGCCACTGTCTGTTTTGGCCTCAAAGAAGTTGAACCCAGATAATGTTTCAAATGAAGGGGAATGTGACGATGAGACTAAGACCGggcttatcaaaaatattgtactaaaaactaaattaaaccgTAATTCCTCTGCTACACCAGTTGTTGTGCAGAGACCTATGGACGTATggctatatttaaaagattttaatacgACTGGTCCATTTAGTTGTTTATTATGCCCTGATTGGTTTATAAACAGACCAAAAGTTATATTGCACTATGTCCTAAATCATAAAAAGGATTTTTGTGGGATATGCAGATACTTTGTACCTGACAGACAATCTTGGATGGAACATGAAAAGTTTCATATTCCTTGGCCATGTTCACAATGTGAATCATCATTTCAAAATGAAGATTTGTTGCGTGACCATTTAAGAAGTGAACATAATTTAGTGCACTGCCGTCTCTGTCATTTTAGAGTATCTGCAGATAATAATTACGCTGCACATCTTCTCCAAAAACATAATGTAACTAATGCGTCAAGAGTGTATGGATGCATGTGGGAATTGGATTCAGACGCTACATTTTCCTGTGTTCTCTGCTCTAAAACAGAAAATCTATTAAGTGCATTCTTTAGTCATTATATGGGCTACCATCACTTTACACTTAAATGTCTAGCTAGCTTAGTATCAGGGAAAGATCCACCATTCACAGTTAAAGGAGTTGATATAAGTTCACAGTTTCTTGATTCGGAATTAAGTGGTCAAACTCGATGTGGCTATGTAGATTTAGAAACCCCAATTATACAACAAACTGATGAAATAGAGGAAACACAAATTAAGTTAACAGACCTAGTACCagacataaaaaaagaatcaCACAGCGACGATGAAAATGTTAGAATTCATGAAGAACCTGTTAAGAAGGAAGCTCAAATTGAAAGCTTAAATGAAAGTCTAAATGAAGAGTGCATTGACTACAGAGGTGAAATAGATTTTGATATCACCTTAACTGAAATTCTTCTATTagaaaattcttattttacttatatttccaaagtttataataaaatggacGAGGGAGTAATGCCAGACTTCTCGAGTGTAGATTATGGTTCTAAATCagaatttattgatttagaaTGCAAATTATGTAAAGTAGTTTTTGAAGATTTACCAACATTCATTATTCACATGACAAAGATGCATTCTGTAAAAACTGAGCAGTTATACTCTTGTAGAGTATGTTTGGCATCATTTGATACAAATTATGCACTAATAGCGCATACCCTTCAAGAGATGGGTGATTTTGAAGATCTTTGGATATGTCAGTTTTGTGACAAGGAATTTAATAACAGAGAGTTGACTAGAGAGCATCTAACTACTCATTGGGACCAATTAGAATCTGATAACTGCTTTAGCCCACATCTCGgttttaaatgcaaattgtGTCCAATGTTATTTTGGAATGAACAAGATAGGGAACTGCACCAGATTAATTcacattttgaaaaatataaagaaactttTTATAAGTGTGAAGATTGTTCATTAATATTCGGTGATAAGGTATGGTTTGTCTATCATTATATCCAAAAACATATAAACGAACAGACAAGAGCAACATACTTATTCAAATGTTGTTTGTGCTGTCTCGTTATATCCAATATTGAAGATATGAGGAGCCATTTTGAAGAATATCACCCAGAGGCTAAGAAGTTGTACTGTTCTTTAGATACATGTGTATTCAGGCCTTTAAGTCAGAGGAAATCGTTGAAAGTCCATGTTAAGACGGTGCATTCGACGAATCGTGACCAAAAACCGAAGGTATTCACCTGCCATGTGTGTCAGAGACGATTCCCTAACTCCCGCTCTTGCAATACGCATATCACCGCAGCGCATGGCACAGCTGGTAAATTCAAATGCAAACTTTGCCCGGATTTGTTACAGACGGCGGATGAAAGAAAACTCCACTATTTGCTTCGGCACCCTGGCCGTCACCCGTTCGAATGTACCGAGTGTGGGAAATCTTTTCAATACAAGTCATCGCTATATATGCACAAACAGGATCACCAACCGAACAAACAGAGCTACACGTGTGATTATTGCGGAAAGATATTCGCTaagAAAGATTCTTTCCGCGAGCACGTACAGATCCACGAAGGGCCGCGTCACGCGTGCTCGTACTGCCCGATGCGGTTCGTTCAACGTTCAAACATGTTGCGCCACGAGCGACGTCACACCGGCGAAAGGCCGTACACGTGCCCGCATTGCCCGAAGACGTTCGCCGACAAGGGGGCATGCACGTCACACTCCAGaacACATTCAAAGGACAGATCTTATGTTTGTCTATACTGTGGCCAGACCTTTCTTCAAAAGTCTAAACTTACCTATCACATACGGAGACACACTGGAGAAAaTTTGGAGACATGTACAGTATGTTCAAAGCTATTTACGAGTGCTTGTTCACTACGCGAGCACATGAAGACTCATGCtgcgaaaaatataaaagtcaaATGTCTTGTATGCGATAAGAAATATCACGACGAGCGTTATATGTTACGTCACATGCGTACAATACACGGAAACAGGCAGTTGACATGTCCCCTTTGCCCCAAACTCGTGTCCAGTATGGCGGCTCTGCGGTATCACGTTTTGACGCATAGCAaccttaatacatttaaaTGCAAGTGCTGTAAAAAGTCGTACATGGTACGTCGGACTATTGTAAAGCACCTTCGAAAACGTCACGGCCTAAACGGTGCCGAAGTCAACATCAAGGAGTACTACTCAAAGTTGGAGCCTAGAGATTGCAATCTAAAGATAGATGAGACTACGATGACCAGAATCTTTGGACCCCCAAAGAAAGAATCGCCAAATATCGTGGGTGACTTTGTAACGTTCACGAAAAGACTGAAATTGGCTGAGAATCTCGATCAAAACACTGATGACACGGAAGCTGATCAGATGTCCGAAGAGGAGAAAGAGCCGGAGAAAGAGACTGAAACACCAAAAGAGAAGCCACGTTTCACACAAGTGGTGTGTAAAGAGGAAGTGGTCGATCCAGAATACGATTTGGAGCCCACTGACTTTGTTAGCGTTAAGATAGAACCGATCGAAGAAGAAACACAAGAAAATGTTTAG
Protein Sequence: MLDSDESDDEPLSVLASKKLNPDNVSNEGECDDETKTGLIKNIVLKTKLNRNSSATPVVVQRPMDVWLYLKDFNTTGPFSCLLCPDWFINRPKVILHYVLNHKKDFCGICRYFVPDRQSWMEHEKFHIPWPCSQCESSFQNEDLLRDHLRSEHNLVHCRLCHFRVSADNNYAAHLLQKHNVTNASRVYGCMWELDSDATFSCVLCSKTENLLSAFFSHYMGYHHFTLKCLASLVSGKDPPFTVKGVDISSQFLDSELSGQTRCGYVDLETPIIQQTDEIEETQIKLTDLVPDIKKESHSDDENVRIHEEPVKKEAQIESLNESLNEECIDYRGEIDFDITLTEILLLENSYFTYISKVYNKMDEGVMPDFSSVDYGSKSEFIDLECKLCKVVFEDLPTFIIHMTKMHSVKTEQLYSCRVCLASFDTNYALIAHTLQEMGDFEDLWICQFCDKEFNNRELTREHLTTHWDQLESDNCFSPHLGFKCKLCPMLFWNEQDRELHQINSHFEKYKETFYKCEDCSLIFGDKVWFVYHYIQKHINEQTRATYLFKCCLCCLVISNIEDMRSHFEEYHPEAKKLYCSLDTCVFRPLSQRKSLKVHVKTVHSTNRDQKPKVFTCHVCQRRFPNSRSCNTHITAAHGTAGKFKCKLCPDLLQTADERKLHYLLRHPGRHPFECTECGKSFQYKSSLYMHKQDHQPNKQSYTCDYCGKIFAKKDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYTCPHCPKTFADKGACTSHSRTHSKDRSYVCLYCGQTFLQKSKLTYHIRRHTGENLETCTVCSKLFTSACSLREHMKTHAAKNIKVKCLVCDKKYHDERYMLRHMRTIHGNRQLTCPLCPKLVSSMAALRYHVLTHSNLNTFKCKCCKKSYMVRRTIVKHLRKRHGLNGAEVNIKEYYSKLEPRDCNLKIDETTMTRIFGPPKKESPNIVGDFVTFTKRLKLAENLDQNTDDTEADQMSEEEKEPEKETETPKEKPRFTQVVCKEEVVDPEYDLEPTDFVSVKIEPIEEETQENV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01204324;
90% Identity: iTF_01204324; iTF_01203496; iTF_01205160; iTF_01206825; iTF_01205968; iTF_01202712;
80% Identity: -