Pman023152.1
Basic Information
- Insect
- Pieris mannii
- Gene Symbol
- JARID2
- Assembly
- GCA_029001895.1
- Location
- CM054852.1:12237764-12243333[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-21 2.1e-17 63.8 0.1 6 89 68 149 64 149 0.91 2 2 3.9 9.8e+03 -2.4 0.1 1 20 155 174 155 188 0.78
Sequence Information
- Coding Sequence
- ATgtgtatcataattttaagaaaaGATCCACTTACATACATAGAGAAAATTTTACCAAAAGCATCCAAATATGGCTTATGCAAAGTTATACCACCTGATGGATTCACACCACCCTGTAACCTTGATGGGACCATGAACTTTAATGTCACAAACCAATATGTCCAACGCATGTTCAAACGATATGGGCCAGCTACAAAAAAGTTAAGCGCTTTCAAAGCCCTCTTAGCATCGCAGAAAGTGCCATTCAAGCGACCACCATTAGTAAGCGGCTTGGAAGTGGACTTACCACACTTATACAAGCTAGTGCAGCAGATGGGAGGCCTaaagaaaattacaaaaataccaCATTGGAACAAAGTGGCTGAACAATTAAAGTGTTGTAAGACTTTAAAAAATCCcggtcaaaaaataaaacagatttatGAGAAATATCTACTCCCATATGAAGTTATGACGTCTTtggaaaaagaaaatttaatagaaCAAGTTGAACATCTGTGTGAAAGACGCCATTCAAGGATGTTTAACCGTGCAATAAGTCCTTTGcacacacaaaaacaaatgctgGAGCCATGCGATTCAACAGATAATGATTCGTCAGATGAAATACCATCAAAAGatcgtttaatatttaatgccCTTGCTGAAACTGAAGACTGCATTGTTCCCGGTCGATCTATGAATCTCCATGCATTTCAAAAAGTAGCTGAAGTCGCTTCCAAAGCATTTTTATCTTCCACaactagaaaaataaatgtgataGAAAAAGAATATTGGGACCTTGTCACGTCGAGGACAAAGCATGTATGTGTAAACGCAGCTTCAATAGATACGGGTGCCGCGGATTATGGGTTTCCAAATAATGATTCAACCGACCATTATAATAGACATCCTTGGAACTTGAAGTGTATCAGTAGGGACATACAGAATATGTTAAGTTTTCTTGGTCCGGTGGTTGGAATGACTGCGCCCACATTACATTTAGGAATGTTGTTTTCGACGAGTTGTTGGCACAGGGACCCTCACGGCCTCCCATGGATTGAGTATATGCATAGCGGAAAGAAGAAAGTATGGTATGGCATCGACGACTCGCAGAGCGAGAAATTTCGCAAAGCAGTCGAACGCTTGTGCCCGGCGTTTGTCCAAAATAAATCCGTTTGGTTACCATCAGATATAGCGATGATCCCACCGGAATTTTTACAAGATTCGGTGTCTCTTTGCCGGGCTGTGCAGAATCCGGGCGAATTTATCATAGTTTGCCCGAAAGCATATTCATCTTCTATTGCCACAGGATACACAATTTCTGAAAGTGTGTACTTCGCCACGTTGTCCTGGATTCATTGTCTCGGTGAAACGTTTGATATATTAAAAAGCAGTTGTGAACCAACAATGTTTTCTCTGGAGCAACTGTTATTTGCATTTGTGAGAGATGCCCGTACTCCGCCGTCGGTTTTAAGAGCTATTGAGCCGATATTAAATGAGGTTCTCAACAAGGAGTTCAGGAACAGACAGAAGTTGGAAGAAATGGGTTTAACTAAAGCGTGGCTGAAACCATACAAGCCTAGTGCAACGCGTGCTTGGAATGTATCTGATCAAGATGAGTGCTATATATGCCGGATGACTTTACATTTATCAAGGGTGCGAGGCGTGTTTGATAAAAATTCAGTCTTATGTCTGGAACACGCGATTAAAGTACTAGAACAACCCGATAAAGGTCACTTATTAACTGAGGATAAGCGACTGTCATTCATAGTTATGTACAACACAAACGAACTTAAGGATCTTttggaatttttaaaagaacgtCTGAGGAGGTACTAG
- Protein Sequence
- MCIIILRKDPLTYIEKILPKASKYGLCKVIPPDGFTPPCNLDGTMNFNVTNQYVQRMFKRYGPATKKLSAFKALLASQKVPFKRPPLVSGLEVDLPHLYKLVQQMGGLKKITKIPHWNKVAEQLKCCKTLKNPGQKIKQIYEKYLLPYEVMTSLEKENLIEQVEHLCERRHSRMFNRAISPLHTQKQMLEPCDSTDNDSSDEIPSKDRLIFNALAETEDCIVPGRSMNLHAFQKVAEVASKAFLSSTTRKINVIEKEYWDLVTSRTKHVCVNAASIDTGAADYGFPNNDSTDHYNRHPWNLKCISRDIQNMLSFLGPVVGMTAPTLHLGMLFSTSCWHRDPHGLPWIEYMHSGKKKVWYGIDDSQSEKFRKAVERLCPAFVQNKSVWLPSDIAMIPPEFLQDSVSLCRAVQNPGEFIIVCPKAYSSSIATGYTISESVYFATLSWIHCLGETFDILKSSCEPTMFSLEQLLFAFVRDARTPPSVLRAIEPILNEVLNKEFRNRQKLEEMGLTKAWLKPYKPSATRAWNVSDQDECYICRMTLHLSRVRGVFDKNSVLCLEHAIKVLEQPDKGHLLTEDKRLSFIVMYNTNELKDLLEFLKERLRRY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206324;
- 90% Identity
- -
- 80% Identity
- -