Basic Information

Insect: Pieris macdunnoughii
Gene Symbol: Gzf1
Assembly: GCA_905332375.1
Location: CAJOBZ010000006.1:920278-927444[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00054 0.033 14.5 0.5 2 23 71 92 70 92 0.97

2 12 0.017 1 9.9 0.7 2 23 99 121 98 121 0.95

3 12 0.082 5 7.7 0.2 2 23 129 151 128 151 0.93

4 12 0.0002 0.012 15.9 2.0 1 23 157 179 157 179 0.96

5 12 4e-06 0.00025 21.2 6.0 1 20 185 204 185 207 0.96

6 12 0.00098 0.06 13.7 0.9 1 22 213 234 213 234 0.97

7 12 0.036 2.2 8.8 1.3 3 19 252 268 251 273 0.92

8 12 5.1e-06 0.00032 20.9 1.4 1 23 594 616 594 616 0.97

9 12 6.6e-05 0.004 17.4 2.0 1 23 623 646 623 646 0.92

10 12 0.039 2.4 8.7 1.8 1 23 654 677 654 677 0.96

11 12 0.00016 0.0098 16.2 1.6 1 23 683 707 683 707 0.97

12 12 7.6e-05 0.0047 17.2 2.4 1 22 713 734 713 734 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00054	0.033	14.5	0.5	2	23	71	92	70	92	0.97
2	12	0.017	1	9.9	0.7	2	23	99	121	98	121	0.95
3	12	0.082	5	7.7	0.2	2	23	129	151	128	151	0.93
4	12	0.0002	0.012	15.9	2.0	1	23	157	179	157	179	0.96
5	12	4e-06	0.00025	21.2	6.0	1	20	185	204	185	207	0.96
6	12	0.00098	0.06	13.7	0.9	1	22	213	234	213	234	0.97
7	12	0.036	2.2	8.8	1.3	3	19	252	268	251	273	0.92
8	12	5.1e-06	0.00032	20.9	1.4	1	23	594	616	594	616	0.97
9	12	6.6e-05	0.004	17.4	2.0	1	23	623	646	623	646	0.92
10	12	0.039	2.4	8.7	1.8	1	23	654	677	654	677	0.96
11	12	0.00016	0.0098	16.2	1.6	1	23	683	707	683	707	0.97
12	12	7.6e-05	0.0047	17.2	2.4	1	22	713	734	713	734	0.96

Sequence Information

Coding Sequence: aTGGAGtctaatatatctttttatagTTTACCAtttatagaTTCGGAAAATTCAGAATCGGGTTTATTTAGAAGAGGAAACGAATGTAATTTCGATATTCATAATCCACTCTCTTCGAGCGGCGCCTTGTTAGGAGGCGACGATGTCCTTGCACAATTTCTCACAGACGGTCCCCTCGAAGAACCCGATCTTAACGGCCCGACGACCTTGGTCtgtgaaatttgtaaaaagaAGTTCGACAATGCTAAGAAATATTATGGCCATTTACGAGTTCATTCCAAAGATAATTTGTGGGTTTGTGATAAATGTCCGAATCagaaattttcaattaaacaGAACCTTATGAAACATTATCTAACACATAAACCATTAGCTAGAGTATGGAAATGTCCACAATGTTCTATGGTTTTTGAAGCGCTTTGGCGTTTACAACAACATCttttttctaaacatttaaaCTACAGaccCCATAAATGTGATGTGTGTGATAAATCATTTCTCAAGGCCTCTGATTTGAAAAAACACAAAGACATTCATGATGgtttaaatagattttcttGCACCATATgtcataaaaaattcaaagataAATCAAATTTGAATCGTCACATGGTTTGTCATACTAAGGAGAAAAAATACCGTTGTTTGGGTTGTCAGAATAGATACTCTCAgctGGCTACATTAAAACGACATCAAAAAACATGTACTCAATTTGTAGACACAGCCAAAGACAAAACTACTAGAAAAAACTATTGTCGAGAATGTGGTATGTCTTTTCAGTATAAGAGTGCATTGTTGGAGCACTGTGTTAGACAACACACAGAAAGTGGAACagatacaaaacaaaatactgatggaaataaaattgttgaaaatattGTTGATGATATACTATCAGTTGAAGATGATTACATGACTATGTCGACAAACCatgatatattaaatacttttaataataatacaagttATACAAATGTTACTCCAGATGATAATTTGatgcaaatagaatttttaaaggaaatgaATCAACTACATTCCTTAGATGACGAGTTCCTTTATAATGATCTAGATTTTGACAGCTTACAAAATAGCCAAATCTTTAATATGAACACTAATGATATAGATTACAGTGGCAATGGAGAAATATTTGACTATACAATAGGTAGCAAGAGTATGGATCAAGATTTAATGAATGCTCTTGCAAGAAATGATAATTTACCCGaagatttgtttaatttaaacacgTTTCCTGATAGACCAGTCTTACCTCCCACTTTGCCTGATGAGTGTGCTACTATTTTCGAAAGCGATGTTGATTTAGAAGCGAGTACAAATTTAGCCGCAAATTTAAATCAGCTTATTGGGGAAAATACAGTGCAGTATATTTCTACTGAAGATGATGATACATTTATCATAAGCCTAAACAGTGAAATCGATGCCGAGAAATTACAAGATATGCTAAATATTGACGTTGAACTAGTCAATAGTGaagaaaaaatagaaatgGGTTTGTTAAAGAACGATTATGTAGTTAAACAAGAAAATAATCTTATGAATAACATTGTACCAGTCATAATTAAGGTAGAGCAAGACAACATAAACAACACAACAGGGACAAGTGagagtaatattaaaaaatataaaaatgctttaaataacaacatagttttaattaaaatagaagaGCAAGATAAAACCCGTAAAGTGGAATTCGATAaagagaatttaaatattaaagaaagtaCAGAGAAGtcatgtaataataaaaagccaGTGGAGTTCATTTGCAAGActtgtaataaagtttttaacaaAAAGGATAATTATAAATCTCACATAGCAATTCATAACCCGTCCCTTCGTCGCCATCGCTGTGACGTATGCGGCGTTCGCTTTAGTTATCGTTCAACACTTAATAAACATCACGCGGCCGCCCATCAGCCGCGAACTTTACCGGATCACACGTGCCCGCACTGCCCGTCACATTATCCCGCTGCATGGatgTTAAAACAACACATAGAGCGATCCCACGAGGGTATAACACGTTTCGAGTGCGACGCAGAAGGTTGCGGGAAGCGGTTCTTTAAGAAGTGCGATCTCGTGGTGCATCAACGgtaTCACACGGGCGAGCGACCATTTTCGTGCGACATATGCAAGCAGCGTTTTCCACACGTATCACATCTTAAAAGACATGAACGCACCGTCGACTGCACTAAGAGGTCAAATGCGTTTTTCCAAAAATCTCATCTTCCAACCAGTTTGGATGTCGTCACTTAG
Protein Sequence: MESNISFYSLPFIDSENSESGLFRRGNECNFDIHNPLSSSGALLGGDDVLAQFLTDGPLEEPDLNGPTTLVCEICKKKFDNAKKYYGHLRVHSKDNLWVCDKCPNQKFSIKQNLMKHYLTHKPLARVWKCPQCSMVFEALWRLQQHLFSKHLNYRPHKCDVCDKSFLKASDLKKHKDIHDGLNRFSCTICHKKFKDKSNLNRHMVCHTKEKKYRCLGCQNRYSQLATLKRHQKTCTQFVDTAKDKTTRKNYCRECGMSFQYKSALLEHCVRQHTESGTDTKQNTDGNKIVENIVDDILSVEDDYMTMSTNHDILNTFNNNTSYTNVTPDDNLMQIEFLKEMNQLHSLDDEFLYNDLDFDSLQNSQIFNMNTNDIDYSGNGEIFDYTIGSKSMDQDLMNALARNDNLPEDLFNLNTFPDRPVLPPTLPDECATIFESDVDLEASTNLAANLNQLIGENTVQYISTEDDDTFIISLNSEIDAEKLQDMLNIDVELVNSEEKIEMGLLKNDYVVKQENNLMNNIVPVIIKVEQDNINNTTGTSESNIKKYKNALNNNIVLIKIEEQDKTRKVEFDKENLNIKESTEKSCNNKKPVEFICKTCNKVFNKKDNYKSHIAIHNPSLRRHRCDVCGVRFSYRSTLNKHHAAAHQPRTLPDHTCPHCPSHYPAAWMLKQHIERSHEGITRFECDAEGCGKRFFKKCDLVVHQRYHTGERPFSCDICKQRFPHVSHLKRHERTVDCTKRSNAFFQKSHLPTSLDVVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01205956;
90% Identity: iTF_01206794;
80% Identity: -