Basic Information

Insect: Pieris brassicae
Gene Symbol: stc
Assembly: GCA_905147105.1
Location: LR989938.1:9097193-9115773[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.2e+04 -4.3 1.6 15 19 443 447 442 447 0.81

2 13 0.12 1.3e+03 -0.2 0.6 4 10 477 483 476 483 0.93

3 13 3.6e-05 0.39 11.1 18.1 4 19 491 506 489 506 0.93

4 13 3.6e-07 0.0039 17.5 11.2 1 18 542 559 542 560 0.97

5 13 0.0023 25 5.3 14.6 1 19 601 619 601 619 0.99

6 13 9.7e-06 0.11 12.9 11.0 1 19 660 682 660 682 0.88

7 13 2 2.2e+04 -5.2 2.2 6 10 712 716 712 716 0.94

8 13 0.015 1.6e+02 2.7 7.3 1 11 722 732 722 733 0.93

9 13 0.033 3.6e+02 1.6 0.3 3 10 735 742 734 743 0.92

10 13 1e-05 0.11 12.8 13.0 3 19 750 766 748 766 0.91

11 13 2 2.2e+04 -4.8 15.6 1 18 805 821 805 822 0.81

12 13 1.5e-08 0.00016 21.9 12.4 1 17 858 876 858 882 0.84

13 13 0.09 9.9e+02 0.2 14.3 1 16 888 905 888 911 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.2e+04	-4.3	1.6	15	19	443	447	442	447	0.81
2	13	0.12	1.3e+03	-0.2	0.6	4	10	477	483	476	483	0.93
3	13	3.6e-05	0.39	11.1	18.1	4	19	491	506	489	506	0.93
4	13	3.6e-07	0.0039	17.5	11.2	1	18	542	559	542	560	0.97
5	13	0.0023	25	5.3	14.6	1	19	601	619	601	619	0.99
6	13	9.7e-06	0.11	12.9	11.0	1	19	660	682	660	682	0.88
7	13	2	2.2e+04	-5.2	2.2	6	10	712	716	712	716	0.94
8	13	0.015	1.6e+02	2.7	7.3	1	11	722	732	722	733	0.93
9	13	0.033	3.6e+02	1.6	0.3	3	10	735	742	734	743	0.92
10	13	1e-05	0.11	12.8	13.0	3	19	750	766	748	766	0.91
11	13	2	2.2e+04	-4.8	15.6	1	18	805	821	805	822	0.81
12	13	1.5e-08	0.00016	21.9	12.4	1	17	858	876	858	882	0.84
13	13	0.09	9.9e+02	0.2	14.3	1	16	888	905	888	911	0.80

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAATACATATGATTACAACAGTCAACATCAGGCTCCAAATACATGGAATTCTGATCCTAATGGTCAATACGGAAGTCAAGTTTATTACAATAGGCAAATGGATCCTAGTAGTAATCAATATGTGAGTTTTAATGAATTTCTATCGCAAATGCAACAGTCTGGAGTTCCTAGTGTCAACACAGCCCAGTATAGTAATGTCCACTATCAGAGTTATCCACCTAACCAATATAATAATGTAAATAGTTATCAAAACTTACCAACAAATGTAAATCCTCAAGCCAATTTTGGATATGGTGCTAGTTCTAGTTATTCAAACAATGTTGAATCTTATGAAACCAATAGTCAAGACCAGTATATTCCTCCAGTTGATGGCAATATTTATACCAATGATGTGGTGTCCAAATCAAAATTAACTCCAACTGCCATTGAATTTATTCCTAAAAATTCTTCATTACAAACAGAACATAATCTGCCTAATGAGATACAGAATGAACCTTTGGATATAGAAAACAGTGGCAGTGGATCCAGTAGTGGTCATGCAAAACCATCAGATTCTAAAAATTGGAGAGAACGACCCAAAAATACAGCACAAAATAGGTCCTATTATACAAATGGATATGAAAATGGAGGAAGCCAAGAACATGATAGCAATGGGAGTCTTCGTTACGATAATAAAAATCGCAAATATGATAAAAATAATAGTCAAAATCATACTAGGCCAGAAAGTAGTCATTATCCACAAAGTTCTAGAAATAATGATACTAATGCTTATAGTAGAAAAAATAGAAATGATAATTATAATAATGGTGATTCAAACCGTTATGATAATCGTAGAGAAGGGGGCCAAAGTAAATCTAAAGGAATGGGTAGAGATACAGACCCTAGTCGAACTTTCTATAACAGTAGCAAAACTAAAGATAGCCAGGATGTAAGAAATGGGAGAGGGGAGCCTTCTGGGAGGCAACGGTGGGCTGGAACTCAACGGCTTAAAGCCAATGAACGTTACAGCTATGAAGATGAACAATATGCAAATTCATATCTTCAAAATAGAGAAGAAAAAGGAAGGAACCATGTACCAAGTCCAGCAAGAAGTAAAAAAACAGTTAGTAATAATGCAGGTTTAAATAAAGAAATGACACAACGAGAGCGCCTGACGGAACAACTTGATAAAGGTACACTAGAGTGCCTGGTTTGCTGTGAAAGAGTAAAACAATTGGATCCTGTATGGTATTGCACTAATTGTTACCATGTTATGCATCTTCGGTGTATTAGAAAATGGGCTGTTAGCAGTATGGTTGAGGGCAAATGGCGTTGTCCCGCTTGTCAAAACACCAGCCAAGACATACCTACAGAGTATAGATGCATGTGTGGTGCAGTGCGTAATCCTGATTACCAGAGAGGTGGCAACACTGCCCATACTTGTGGTAAAGCCTGCAAAAGACCTAGAAGTTGCCCACATCCATGCACTTTGCTTTGCCACCCGGGACCGTGCCCACCCTGCCAAGCTACTATTGCAAAGAAATGTGGCTGTGGTGCAGAATCCCGGTCTGTATTATGCAGTAGCAAGTTGCCACAGGAGTGTGGAAGACAGTGTGGTCGCAAACTTAACTGCGGTGTTCATAGCTGTGCGAATGATTGTCACGAGGGACCGTGCGAGGCTTGCGATTTTATCGTGGAACAAGTATGCTACTGCCCAGCCGCTAAAACCCAGTCAGTACCATGTACGCCAGAAAGTGGTGATAAGCGTACATTCTCTTGTGGATCTGCGTGCGCGCGCGTACTCACTTGCGGCGCGCACGTATGTCGGGACGAATGTCATCCACCACCTTGTAACACATGCCCACGGAGTGTGGAAAATGTTATAACGTGTCCCTGTGGAAACACTAAATTAAAAGAGGGTGAACGCAAAAATTGCTCGGACCCAATACCGCTGTGTGGTAATATCTGCGCTAAACCACTCATTTGTGGACCGGATAATGATAAGCATTTCTGTATGCAAAAGTGCCACGAAGGAGTATGTCCCGAGTGTCCAAACACCACAGTCCTTCAATGCCGCTGTGGTCACTCGACTGTTGATGTGCCTTGCAAAGATCTACCTGGTGCTTATGACAATGTGTTCTGTCAGAAGAAATGTAATAAGAAAATGTCGTGTGGGCGCCATCGCTGCCGCACAGCTTGCTGCGCGTCCTCACACCGCTGCGCTGTGGTTTGTGGGCGAACTTTATCCTGTCAATTACATCGATGCGAGGACTTTTGTCACACAGGACACTGTGCGCCTTGTCAACGACTTGGCTTTGAAGAACTCCGTTGTGAATGCGGTCTCGAAGTGATCCTGCCCCCGATCCGGTGTGGGGCGAAGCCTCCACCGTGCAGTGCCCCTTGTCGCCGGGAACGGCCTTGCGGACATCCGCCTCATCATTCGTGCCACTCTGCGGACTGTCCACCCTGCGTCGTGCTTACCACCAAGACTTGTTATGGAAAGCATGAGGAAAGGAAAACTATACCGTGTTCCCAAGAGGAGTTCTCTTGCGGTCTGCCCTGTGGAAAGCCGCTACCTTGCGGAAAGCATACTTGTATTAAGATCTGCCACAAGGGACCGTGTGATACTGAGAAATGCAACCAGCCGTGTAACGAGAAAAGGTCATCCTGTGGTCATCCTTGCTCTGGGCCGTGTCATGCGACAAATGGCGGCCCATGCCCCAGCACTTCGAATTGCAAGCGAGCTGTTATCGCCACTTGTCCTTGTGGACGCAGGAAGGCTGAAAGAGCCTGTTGCGATAACGCTAGAGATTTTGCCAAGATTTTAAATGCCCTGGCTGCGACGAAGATTCAAGAAGGCGGTATGGTTGATCTGTCAGACGCACACCGGCCTAGCGCCATGTTGAAAACCCTAGAATGCGATGACGAATGCCGTCAAGAAGCCCGTAGCCGTCAACTCGCGCTCGCTCTTCAAATACGGAACCCGGACGTGTCCGCGAAACTCGCGCCGAGGTACAGCGATACGTGCAGAGCAATGGCTGCTAGGGAACCAAGCTTCGCTCAACATGTGCATGAAAAACTCACTGATTTGGTGCAATTGGCTAAAAAGTCAAAACAAAAAACACGCGCCCACTCATTCCCGTCAATGAATCGTCCGAAACGTCAATTCATTCACGAAATGTGCGAACACTTTGGTTGCGAGAGCGTCGCGTACGACGCGGAGCCCAATCGCAACGTGGTCGCCACAGCTGATAAGGAAAAGTCATGGCTACCAGCGATGAGCGTGTTGGAAGTATTAGCTCGTGAAGCTGGTAAACGAAGAGTTCCAGGTCCAATACTACGCGCTGCGACTAGTAGCGCCGCTTCCGCTCCAGCGGCTACGCCCGCATCCGCTCCCGCTACTAAATCTTTTGGTGGTTGGGCGACATTGACTTCGACCAATTCGTGGGCAAGTCGAAGTCAACCTTCAACGTCCGCAGTGGTCAAAAATGCACCACTTAGACAGGAGTCGCGGCCAAAAATCGACTATTTTGATAATCCACCAGAAGATTAA
Protein Sequence: MSQWNNTYDYNSQHQAPNTWNSDPNGQYGSQVYYNRQMDPSSNQYVSFNEFLSQMQQSGVPSVNTAQYSNVHYQSYPPNQYNNVNSYQNLPTNVNPQANFGYGASSSYSNNVESYETNSQDQYIPPVDGNIYTNDVVSKSKLTPTAIEFIPKNSSLQTEHNLPNEIQNEPLDIENSGSGSSSGHAKPSDSKNWRERPKNTAQNRSYYTNGYENGGSQEHDSNGSLRYDNKNRKYDKNNSQNHTRPESSHYPQSSRNNDTNAYSRKNRNDNYNNGDSNRYDNRREGGQSKSKGMGRDTDPSRTFYNSSKTKDSQDVRNGRGEPSGRQRWAGTQRLKANERYSYEDEQYANSYLQNREEKGRNHVPSPARSKKTVSNNAGLNKEMTQRERLTEQLDKGTLECLVCCERVKQLDPVWYCTNCYHVMHLRCIRKWAVSSMVEGKWRCPACQNTSQDIPTEYRCMCGAVRNPDYQRGGNTAHTCGKACKRPRSCPHPCTLLCHPGPCPPCQATIAKKCGCGAESRSVLCSSKLPQECGRQCGRKLNCGVHSCANDCHEGPCEACDFIVEQVCYCPAAKTQSVPCTPESGDKRTFSCGSACARVLTCGAHVCRDECHPPPCNTCPRSVENVITCPCGNTKLKEGERKNCSDPIPLCGNICAKPLICGPDNDKHFCMQKCHEGVCPECPNTTVLQCRCGHSTVDVPCKDLPGAYDNVFCQKKCNKKMSCGRHRCRTACCASSHRCAVVCGRTLSCQLHRCEDFCHTGHCAPCQRLGFEELRCECGLEVILPPIRCGAKPPPCSAPCRRERPCGHPPHHSCHSADCPPCVVLTTKTCYGKHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKICHKGPCDTEKCNQPCNEKRSSCGHPCSGPCHATNGGPCPSTSNCKRAVIATCPCGRRKAERACCDNARDFAKILNALAATKIQEGGMVDLSDAHRPSAMLKTLECDDECRQEARSRQLALALQIRNPDVSAKLAPRYSDTCRAMAAREPSFAQHVHEKLTDLVQLAKKSKQKTRAHSFPSMNRPKRQFIHEMCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPILRAATSSAASAPAATPASAPATKSFGGWATLTSTNSWASRSQPSTSAVVKNAPLRQESRPKIDYFDNPPED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01204546; iTF_01206210; iTF_01205381; iTF_01203724; iTF_01207033; iTF_00879306;
90% Identity: iTF_01204546;
80% Identity: -