Pbra014539.1
Basic Information
- Insect
- Pieris brassicae
- Gene Symbol
- pnr
- Assembly
- GCA_905147105.1
- Location
- LR989935.1:13977370-13986296[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-18 1.7e-14 53.4 3.8 1 35 111 144 111 145 0.97 2 2 3.3e-18 1e-14 54.1 6.0 1 34 178 210 178 212 0.98
Sequence Information
- Coding Sequence
- ATGTTTGGCGGCAGTGGTGGCGGCGGTGGAGGATCCTATGGTGGTGACTGCGCGGAGGGTTATGGACTGGGCTACAACGGACGTCTGCAACACTACGCTGCACACTTCGCGCCCCACCAGACCTGGCACCACCATGCGGCCCATCACGACACATACGGTGGAGGCAGTGTAAGCGGTGTTGGCAGCGTCGGCACTGTGGGCGGCGTGGGAAGCGTCGGCGGTGGACTTTATGGACAAAACATGGTGATGGGCGGCTGGTGTGCGCCCTACGACGCGCTTCAAAGACCACCGGCTTACGATGGTGCGGAGGCGTACGAGGAGGGCCGCGAGTGTGTCAACTGCGGCGCCAACAACACACCATTGTGGAGACGCGACGCTACCGGACATTACTTGTGCAACGCCTGCGGTCTCTACCACAAGATCAACGGCGTCAACCGGCCGCTGGTGAAGCCGAGCAAGCGGCTGAGGTGGATGAGTGAGGGCATGGCGCGGGGCATGAAGAAGTCTGCTGCGCGACGTCACGGGCAGTGCTGTACTAACTGCGGGTCTCGCAATACTACATTGTGGCGGCGAAATAATGATGGTGAACCTGTCTGTAACGCTTGCGGCCTTTACTATAAGCTGCATGGAATAAATCGACCACTAGCAATGAGGAAAGACGGTATTCAGACGCGAAAGAGGAAGCCGAAAAAATCAGCGAGTGGAACGAAACCTGCTCACGAGGCACCCAAAAAGGACGGGCAGGGTTCACCAGGCATTGATGACAGTAAATCAAGTATATCAGAAGTGCCACTGCCGCTGACGGCCTCACTATCCCCACATACGCACGGGCACACTAGCAAGCAGGCAAGCGGCGAGCAGAGCGGGCAAAGTGGGCAAGGTGTACAGGGTGTTCAGGGCGGGCAATACGGGCTTGCTAGCACAGCGTTCTTGTCTTCACCGTCCTTGTTCAATATCAAAAGCGAGCCGGCTGCGGCATATGACCCGCCAGGTTATCCGCCCACGGGGAACCCACCACACCACTACCACTCCCACCACCATTATCTACACGCGCTGCAGTACGGCTTGTCCAACGGTGAAGAGGAGGAAGGCAGTGGATTTCTTCACCAGCGCAATGTCACCGCACACGCCAAACTTATGGCCTCAACGTAG
- Protein Sequence
- MFGGSGGGGGGSYGGDCAEGYGLGYNGRLQHYAAHFAPHQTWHHHAAHHDTYGGGSVSGVGSVGTVGGVGSVGGGLYGQNMVMGGWCAPYDALQRPPAYDGAEAYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLRWMSEGMARGMKKSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSASGTKPAHEAPKKDGQGSPGIDDSKSSISEVPLPLTASLSPHTHGHTSKQASGEQSGQSGQGVQGVQGGQYGLASTAFLSSPSLFNIKSEPAAAYDPPGYPPTGNPPHHYHSHHHYLHALQYGLSNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205361;
- 90% Identity
- iTF_00879288;
- 80% Identity
- -