Lari007243.1
Basic Information
- Insect
- Leptophobia aripa
- Gene Symbol
- pnr
- Assembly
- GCA_951799465.1
- Location
- OX637269.1:6424275-6430472[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-18 1.4e-14 53.4 3.8 1 35 111 144 111 145 0.97 2 2 3.6e-18 8.4e-15 54.2 6.0 1 34 165 197 165 199 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGTGGCAGTGGTGGAGGCGGTGGCGGATCGTATGGTGGTGACTGCGCAGAGGGCTATGGCCTGGGCTACAACGGTCGCTTACAGCACTACGCTGCACACTTCGCGCCCCACCAGACCTGGCACCATCACGCGACACATCATGACTCTTACggTGGAGGCAGCGTGAGTGGTGTTGGAAGTGTTGGTGCTGTGGGCGGTGTTAGTAGTGTAGGCAGTGGACTATATGGACAAAACATGGTGATGGGCGGTTGGTGTGCACCATACGACGCGCTGCAAAGACCACCAGCATATGATGGTGCAGAGGCATACGAGGAGGGCCGGGAGTGTGTCAACTGCGGTGCCAACAACACACCATTGTGGAGGCGCGATGCAACCGGACATTACCTGTGCAACGCATGCGGCCTCTACCACAAGATCAATGGCGTCAACCGCCCGCTGGTGAAGCCCAGCAAGCGGCTGTCAGCAGCGCGACGTCACGGCCAGTGCTGTACCAACTGTGGATCTCGTAATACCACGCTGTGGAGGCGAAACAACGATGGTGAACCAGTTTGCAATGCTTGCGGCCTTTACTATAAGCTGCATGGGATTAACCGACCACTGGCAATGAGGAAAGATGGCATTCAGACACGAAAAAGGAAGCCGAAAAAGTCAGCGAGTGGTACGAAGCCCAACCACGAGACAACTAAAAAGGACGGCCAAGGCTCACCAGGCATCGACGATAGTAAATCCAGTATATCGGAAGTGCCGCTGCCACTGACGGCGTCATTGTCACCACACACCCACGGGCACACAAGCAAGCAGGCAAACGGCGAGCAGAGCGGGCAGGGGGGCCAGGGTGTACAGGGCGGGCAATATGGGTTGGCCAGCACGGCATTCTTGTCTTCACCGTCGTTGTTCAACATCAAAAGTGAGCCGGCGGTGGCCTACGATCCGCCCGGCTACCCGCCCACCGCTAACCCGCCCCACCACTACCACTCGCACCACCATTATCTTCACGCGCTGCAGTACGGCTTGACCAACGGTGAAGAGGAGGAAGGCAGCGGTTTTCTTCACCAACGCAATGTCACCGCACACGCCAAACTCATGGCCTCCACGTAG
- Protein Sequence
- MFGGSGGGGGGSYGGDCAEGYGLGYNGRLQHYAAHFAPHQTWHHHATHHDSYGGGSVSGVGSVGAVGGVSSVGSGLYGQNMVMGGWCAPYDALQRPPAYDGAEAYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSASGTKPNHETTKKDGQGSPGIDDSKSSISEVPLPLTASLSPHTHGHTSKQANGEQSGQGGQGVQGGQYGLASTAFLSSPSLFNIKSEPAVAYDPPGYPPTANPPHHYHSHHHYLHALQYGLTNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205361;
- 90% Identity
- iTF_01207016; iTF_01206191; iTF_01205361; iTF_01203706; iTF_01202912; iTF_01204529;
- 80% Identity
- -