Pbra012558.1
Basic Information
- Insect
- Pieris brassicae
- Gene Symbol
- -
- Assembly
- GCA_905147105.1
- Location
- LR989932.1:13398716-13594378[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-10 4e-06 26.6 0.4 3 118 55 168 53 199 0.71 2 3 7e-13 1.5e-08 34.6 16.2 343 512 198 355 182 356 0.71 3 3 0.65 1.4e+04 -4.9 2.2 156 214 709 719 627 762 0.38
Sequence Information
- Coding Sequence
- ATGAAGAAAGGGCCACACAAAATGATGCTGGAGTCGACCCGGTACGACAAGTGGGATCGGGGCGGGGCGTCGGGCGGCGCGGGGGGCGCGGGTGGCGCGACGTGGTCGGGTCGCGAGCGCGACGCCCGTGACGCCCGTGACTCCCGCGACGCCCGTGACACGCGTGACCGTGAGCGTGACAGGGAGCGCGAGCGGCAGGCGCGCGCCCATCAAATGTCGCACGCCCATACGTCAGAGCCCCCCGACAACTCTTCCCTCTTCCCTGCACCATTCAGAGTGACGGGAAACCGGGATCGTGTGAGCCAGCAAGTTCAGATCAAGCTGGGCGACTACCACCTCGCACAGACCTTACTCGACGACCCCAGCAAGTCCATTGGAATCTGTGCTGAACCCGCCAGCCCTGCGCCATGTCATCCGTCTAGGCGAGAAAGCGAGTTCAAAAAGCCTGCGCACGCGCCTCAAAACGGACGGATCCACCATCGACCCTATCCCTACAATAAGAGCGAAGGCCTCAGCTCTACGGGGTCGACGGGACACCGGCCGCCTCCTCTGCGGATACCTAACGGTTTTACAGCTCAGAATGCCATCGACAGCAGCAGTCAACCGCCTATAGAAAGTATTTTAAAGGAGATGAAGTCCCTACCCACCCCCCTCTCGGTGATAGCAGCCACACCCAGGAAAGAGGCTGAAAATAAATTTATTTTCAACCCGTACACGAATAAGGTGCAAGAAAACCCTCAGTTGGCAAACAACGATCTCAAAACACCTGTCGCTAAATCTGGTTTGGACAGTCGGATATCGAATTCTAGGAATTCAGTGTCACCTGACGTAGTTAACAAGGACCTTGGTCTGTCTGAGAGTGATGACGAGGTCGCAGCCACTACCACCAGACTGGAGCCAATCCTCTCACCGATACGCTCCGGGGGTAGTCCGAGTTCCGGTAGCGAGTCTTCACCTTCGGACTCTGAGTCAGAGTCTTCTTCAGCTGAGTCCACGGCTCCAGCGCCAGCCCCTGCCCCGGCGCCGCCACCCGCGCAGCGCCCCTCGTGGGGCCTTTCGAACTTCGCGCCTCCACCGCCGGAGCCTCCCGACCATCCCGACTTGACAAATGTACTGGCTGATGCTAAGGGAAAACCGAGTCCGATATCGGATCTGACCGATTCCGAAGCATCGTCGCCATCTCCGGGGGTTAGGCGTCGCAGGTCTCTCGCCAACCGCATTTCCACTGCATCTAGTGATGAAGAAACACCTCGACCTGTGCCGGTTCGACCACAAGCATCGCCAAGCGTGCCACCACCAATTCCAAGCGGTTCTCAAAGCACAGGGGTCAAGCGTGGGCGGCCGCCCAAAGTGCGAACGTCGGAAGAACGCCCGCCCAAGAAAAAGCGCGGCCGCCCAAAGAAGACCCGCCCACAGTCTCCGGCTCCACCTGACAGTGAGCCGGAACCCGATCCTCCCGTACATCATGCTTTACAGGATACTAAAACACATATCTTTCGTAAGGTTTTCACTCCTAAAAAGGGTGACGAGTGTGGAGGAAAGGGTGGAAAAGGTGGCAAAGGAAAAGGAGGCAAGGGCAAAGGCCAAGTGACGATAATCGAAGTGACGGCGCCCGAATCCGGGGCTGATGACGACGACCGCCACAGGGACCGCTCCACCGAAAGAAGAACCGAAGAAGCTATTGCCAGAGTTTCTCCTCCACAAGAATCGGAGACCTACACCAGAAGACGAGACGCCGAGAGAAACGCTAATGATAGGATACAAGGAGTTCCCATTGAAAGGCCGGACTACCGCCGCACCGAAGATAGGCCGACTATAGAACGCACCTCGGTAGACCGCCTCCCAGACAGAATAACCAATGATCGGTTAGTCCCCGAGCGTATACCATCAGACAGGAGGTCCACGGATCGACTGCCCCCGGACAGACCGGATCGCAACGATCGCGCCCAAGAGAGACTATCGAACGACCGCTTCCAAGACAGAATATCCAACGATCGCCTCCAGGAAAGGATATCCACAGATCGACTCCAGGAAAGAATTTCCATAGATCGCTTCCAAGAAAAGCTCTCTTCCGACAGATTGCAAGAGCGATTATCAAATGATAGATTGTCGAACGATCTCATCTCCCCTGATCGTATATCCGACAGGTCCTCAGACAGATTGTCGACGAGCGATCGAATGGATCGAAAATCGGGCGACAAAATGTCGATCGACCGGTCGAGCGACAAGTTGGATAGGTTGTCGAGTGATAAAAAGATATCTGTGGACCGGGTGGAGAGAATAACGCCAGAGAGGGCGGAGGCGGACGTTGGATTTGTCCAGTGTCCTGTGCCTATAGTGTCAGAGCGCCGCAGTCGTTCCCGAGTACTAGTGAGTATTCCCCTGGGACGTCTCCGAGCTGAGCTGGTCCGTGCCTTGCGTACTCCGAGAAGACCTGGCCCACCACCGGCGCAGGTCAACACACCTCTACAGAGCGAAGTGGCGGCGACGAACCACGAGCGGCCGCCCCCGTGTCTAGGCCAGACTCCGATCTACTACTCGTACTTTGAACAGTTGCCCGCTGACGCGCTTTCTGACGAAGAGCGGGACCACAAATACTACCTCGCGGAAGCGAAACGCCTCCGCTCAGCGGCGGAGAGCGAACAGCACGCCTTGCCACGGGTGATGCTGTACCTTGAATCCGTGCTTTGCTTCGTTTTGACCGGACGTGTGTTGGAGCTGGAGTTGGATACCAAAAGAGCCTTCACAATATACCGGGAGACCATCGAGTATATCAAGTCCATACACTCGATGCCGCAAAGGATCAGGGCCGAAGCGAGGAAAAAGGGAGGAGAACCTCACTCTACCTTCAGCAAACTGGATATATTGAGCCTCCGCGTACAAGCCCTGCTGTACCTGCGCATGTTTAAGATGTACAATCGTGAAGTGAAGGAGTACTACAAGATCGTGCAAGAGTATCAACAAAAGGTCGGTAATCCGGCCTGCGCCGAATCGGTTTCGCCTCTGTCTCCGACGCCTTCCCCCGCGGGGTCAGTGGGATCCGGCGGTTCGGCGTCGAGCGGGTACTGCTCCCTGGCGCACGCGGTTCCTGCGCACGCGCACAACGCCCTACTTCAGCTCACCAAGTACTACACGTTCCTGTACGTCGCGCACGATCTATGGGAACAGGCCGATTGTTTGTGCCGGTTGAGGCCTAATCAAGATCTGTTCATAGCAGTGGATCGAAAATGCGGACCGCTGACTCTCTTCTCGACGTTTAGACATCTCGTGCAATATGTACGTTACGCCATCTCTCTACTAAAGAGTGCACCACAGTGA
- Protein Sequence
- MKKGPHKMMLESTRYDKWDRGGASGGAGGAGGATWSGRERDARDARDSRDARDTRDRERDRERERQARAHQMSHAHTSEPPDNSSLFPAPFRVTGNRDRVSQQVQIKLGDYHLAQTLLDDPSKSIGICAEPASPAPCHPSRRESEFKKPAHAPQNGRIHHRPYPYNKSEGLSSTGSTGHRPPPLRIPNGFTAQNAIDSSSQPPIESILKEMKSLPTPLSVIAATPRKEAENKFIFNPYTNKVQENPQLANNDLKTPVAKSGLDSRISNSRNSVSPDVVNKDLGLSESDDEVAATTTRLEPILSPIRSGGSPSSGSESSPSDSESESSSAESTAPAPAPAPAPPPAQRPSWGLSNFAPPPPEPPDHPDLTNVLADAKGKPSPISDLTDSEASSPSPGVRRRRSLANRISTASSDEETPRPVPVRPQASPSVPPPIPSGSQSTGVKRGRPPKVRTSEERPPKKKRGRPKKTRPQSPAPPDSEPEPDPPVHHALQDTKTHIFRKVFTPKKGDECGGKGGKGGKGKGGKGKGQVTIIEVTAPESGADDDDRHRDRSTERRTEEAIARVSPPQESETYTRRRDAERNANDRIQGVPIERPDYRRTEDRPTIERTSVDRLPDRITNDRLVPERIPSDRRSTDRLPPDRPDRNDRAQERLSNDRFQDRISNDRLQERISTDRLQERISIDRFQEKLSSDRLQERLSNDRLSNDLISPDRISDRSSDRLSTSDRMDRKSGDKMSIDRSSDKLDRLSSDKKISVDRVERITPERAEADVGFVQCPVPIVSERRSRSRVLVSIPLGRLRAELVRALRTPRRPGPPPAQVNTPLQSEVAATNHERPPPCLGQTPIYYSYFEQLPADALSDEERDHKYYLAEAKRLRSAAESEQHALPRVMLYLESVLCFVLTGRVLELELDTKRAFTIYRETIEYIKSIHSMPQRIRAEARKKGGEPHSTFSKLDILSLRVQALLYLRMFKMYNREVKEYYKIVQEYQQKVGNPACAESVSPLSPTPSPAGSVGSGGSASSGYCSLAHAVPAHAHNALLQLTKYYTFLYVAHDLWEQADCLCRLRPNQDLFIAVDRKCGPLTLFSTFRHLVQYVRYAISLLKSAPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -