Pate019193.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phymatocera aterrima
Gene Symbol
nfxl1
Assembly
GCA_963170745.1
Location
OY720669.1:5078663-5081818[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1.1 1.3e+04 -3.2 1.1 15 19 126 130 125 130 0.81
2 18 1.1 1.4e+04 -3.3 2.8 4 10 161 167 158 167 0.86
3 18 1.9e-07 0.0022 18.4 17.0 1 19 175 192 175 192 0.99
4 18 3.6e-09 4.3e-05 23.8 16.0 1 19 228 246 228 246 0.99
5 18 1.4 1.7e+04 -3.7 1.1 10 14 253 257 251 257 0.71
6 18 0.73 8.8e+03 -2.7 0.8 5 10 270 275 270 275 0.86
7 18 0.11 1.3e+03 -0.0 8.4 1 18 281 299 281 300 0.88
8 18 9.6e-06 0.12 12.9 8.8 1 18 335 352 335 353 0.96
9 18 0.0034 41 4.7 8.0 1 12 387 398 387 398 0.94
10 18 0.033 4e+02 1.6 0.5 4 10 406 412 405 412 0.97
11 18 1.2e-07 0.0014 19.0 14.8 1 19 418 436 418 436 0.93
12 18 0.00017 2.1 8.9 8.9 9 19 484 494 482 494 0.90
13 18 0.07 8.5e+02 0.5 4.9 3 11 505 513 504 514 0.87
14 18 1.2 1.4e+04 -3.4 6.7 14 19 543 548 543 548 0.90
15 18 0.00013 1.5 9.3 3.1 1 11 584 594 578 595 0.90
16 18 2 2.4e+04 -4.4 1.1 14 18 607 611 607 612 0.82
17 18 0.00051 6.2 7.4 16.3 3 19 624 640 615 640 0.88
18 18 5.8e-05 0.7 10.4 10.6 1 16 685 699 685 705 0.92

Sequence Information

Coding Sequence
ATGAGGAAATTCAAAAGAGCTCAGGCTCAAAATGAAGCGGCGATTCAAAGACACATGGAAACACATCCTTTGGTGGAATCATCAAGCGACGAAGAGGACGAAGCCGGGCAGGAAATATTAGAAAAAGCTGTTGGCAAAGTTTTAACTTCCTATCAAGACCAGGGAGgagattcagaaaaaattcTATCTTATTTAGCTGATACTTTTCAATCTAACGGAGCGGTTTGCCTGATTTGTATTTCATCGGTCAAAAAAACTGACGCAATATGGAGCTGCGGGAAATGCTATTCGTTCATGCATCTACCCTGCATTCAGCACTGGATTCGAGACAGTTTAACTTATAAACGGGATCGTggaatttcacaattttggGCATGTCCGAAATGTCGTACGGAatacgaagaagaggaagcgCCGAGAGATTACGAATGTTTTTGTGGAAAAACAAGAGATCCGCCATACCAGCCATGGTGCGTTCCGCACTCGTGCGGAGAAGCATGTGGAAAGCTTCTTCAACCAAAATGTGGACACTCTTGTGTCCTGCTGTGTCATCCAGGGCCTTGTCCGCCGTGTCCAAAAATGGTTTCTTCAAAGTGTTACTGTTCCAAACAATTACCACGTCCGAGACGTTGCAATGCTAAAGAATGGAGCTGTGGCACTGTTTGTGGAAAACGATTGGAATGCGGCAAACATTCTTGTAAAGAAACTTGTCATTCGGGAAACTGTTCGCCTTGTCCTGAACAAATTTCTGCATCTTGTCATTGCGGAAATAAAACTGAGACAAAATCTTGCTTCGATTCAAATTGGAGATGCGATAAACCTTGCaaaaaaattttatcttgTAACGTTCACATTTGCAAAGGTGTTTGCCATCTCCCAGATGATTGCGGAGATTGTTTAACTGCTAAGAATAGATCCTGCCCATGcgggaaaagaaaatacaaaatctcTTGCAAGCAAGACGCACCAACGTGCGGAGATACATGTGGAAAATTGCTAGACTGTGGATCACACTATTGCAATAAACGCTGCCACTCCGACAGCTGCGGACTATGTTTAGAAGTTGTTACTAAATCGTGTAAATGTGGTTTTCACAAGAAAGAGATCGCTTGTGCCAAGGTTTTTCATTGCGATACTAAATGCAAGCAGATTAGATTGTGCGGTAGACATCCATGTAATAAAAAATGCTGTGATTGTGtcaagaaaaacaattttcacgcTTGTGAGAAAATATGTGATCGCACTTTGAGCTGCCGTAAACACAAATGTACCGCTCCTTGTCACAGCGGTCCTTGTTATCCATGCCCTAGAACCGATACAATTCAATGTCGCTGCGGTTCGAGTAAAATTGTCATACCCTGTGGCACagcgaaaaaaattaaacctCCCCATTGCAATAAGATGTGTAAAATTCCTCCAATTTGTCACCACCCAAAAAGAGAATCACACAAATGTCATCAGGGACAATGTCCTCCTTGTAAAAAGCAATGCTCTTTAGTCCACAAAAAATGTGAGCACATTTGTCCAGCACCTTGTCACGCCAAGGTTTGGGTGAAAGTTAACGGTGTTACGCAGCCCGCCGGACCCTGGGAAAAACAAAAGGATAAAATGCAGTTGAAAACTCTGCCTTGTCCTCCTTGCCAGGTGTCTGTCATGGTAACATGCTTGGGCGGTCATGAAACTCTGCCTTGGCCATGTCACAGAGCTGTTTCAACCTCTTGTCAAAGAGAATGTGGTCAGATTTTATCCTGCACCAATCATAAATGCACATTTTTGTGCCACGTTGTTAAAGACGCTGGAGATAATGGGAATCCAACGCCTTGTGAGGAGTGCGTAAAACCTTGCGGTTTTCTGAGGCCTCAGGGATGCACTCATTCTTGCCCTAGTGTCTGTCATCCTCCTCCGTGCAAACCTTGCAAACAGATTGTCCGACTACCCTGCCACTGCGCTATCAATAATTTGTACATTAGATGCTCAGAGCTTACTTCTGCGACGACCGAATCTAGAAACGAAATGTTCAAGTGCGGAAACCAGTGTCCTAAAAATtttccaTGTGGACACCGATGTTCTGCGGACTGTCACGCGGGATCATGCAAGGGTGTTGAAGATTGTAAtaagaaagtgaaaatttgGTGCAAATGTAAGAGATTAAAGAAAGACTTTTCCTGTCTATTAGTAAGATCAGGAAAAGCTGTAGTTGAATGTGACGATATTTgccaagagaaaaagaaagaaaggattCAGGCGCAGGAAGCTGAATTAGccaggaaaaagaaagaggaagaattgCGAAACCAAAAAgaggttgaaaaatttgaaagaaagttCAAACCCAGACGTAAAGGCAAAGACAAATTCAATGAGGAACCGAAAACGAGAGAGcgaaattacaattatttgaTGTGGCTCGTAGCTTTATTTATCATTACCGTAGCTTTTCTAGTCACTGTTTTTGATCTCAAGATTTAA
Protein Sequence
MRKFKRAQAQNEAAIQRHMETHPLVESSSDEEDEAGQEILEKAVGKVLTSYQDQGGDSEKILSYLADTFQSNGAVCLICISSVKKTDAIWSCGKCYSFMHLPCIQHWIRDSLTYKRDRGISQFWACPKCRTEYEEEEAPRDYECFCGKTRDPPYQPWCVPHSCGEACGKLLQPKCGHSCVLLCHPGPCPPCPKMVSSKCYCSKQLPRPRRCNAKEWSCGTVCGKRLECGKHSCKETCHSGNCSPCPEQISASCHCGNKTETKSCFDSNWRCDKPCKKILSCNVHICKGVCHLPDDCGDCLTAKNRSCPCGKRKYKISCKQDAPTCGDTCGKLLDCGSHYCNKRCHSDSCGLCLEVVTKSCKCGFHKKEIACAKVFHCDTKCKQIRLCGRHPCNKKCCDCVKKNNFHACEKICDRTLSCRKHKCTAPCHSGPCYPCPRTDTIQCRCGSSKIVIPCGTAKKIKPPHCNKMCKIPPICHHPKRESHKCHQGQCPPCKKQCSLVHKKCEHICPAPCHAKVWVKVNGVTQPAGPWEKQKDKMQLKTLPCPPCQVSVMVTCLGGHETLPWPCHRAVSTSCQRECGQILSCTNHKCTFLCHVVKDAGDNGNPTPCEECVKPCGFLRPQGCTHSCPSVCHPPPCKPCKQIVRLPCHCAINNLYIRCSELTSATTESRNEMFKCGNQCPKNFPCGHRCSADCHAGSCKGVEDCNKKVKIWCKCKRLKKDFSCLLVRSGKAVVECDDICQEKKKERIQAQEAELARKKKEEELRNQKEVEKFERKFKPRRKGKDKFNEEPKTRERNYNYLMWLVALFIITVAFLVTVFDLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01303874;
90% Identity
-
80% Identity
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