Basic Information

Insect: Phymatocera aterrima
Gene Symbol: -
Assembly: GCA_963170745.1
Location: OY720669.1:1844803-1854158[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.4e-05 0.0098 16.7 1.4 1 23 468 490 468 490 0.96

2 18 2e-05 0.0021 18.8 1.9 1 20 496 515 496 518 0.94

3 18 3.1e-05 0.0032 18.2 0.7 1 23 524 546 524 546 0.98

4 18 7.6e-05 0.008 17.0 4.4 1 21 552 572 552 574 0.95

5 18 2.4e-05 0.0025 18.6 4.6 1 23 580 602 580 602 0.99

6 18 2.4e-05 0.0025 18.6 5.3 1 23 608 630 608 630 0.97

7 18 9e-06 0.00094 19.9 7.1 1 23 636 658 636 658 0.97

8 18 8.7e-08 9.1e-06 26.3 2.7 1 23 664 686 664 686 0.98

9 18 6.5e-05 0.0068 17.2 6.7 1 23 692 714 692 714 0.97

10 18 2e-05 0.0021 18.8 5.8 1 23 720 742 720 742 0.98

11 18 5.3e-07 5.6e-05 23.8 2.9 1 23 748 770 748 770 0.98

12 18 7.9e-06 0.00083 20.1 7.8 1 23 776 798 776 798 0.98

13 18 2.5e-05 0.0026 18.5 9.1 1 23 804 826 804 826 0.98

14 18 3.3e-05 0.0034 18.2 7.5 1 23 832 854 832 854 0.98

15 18 0.0016 0.16 12.9 8.8 1 21 860 880 860 882 0.94

16 18 1.2e-05 0.0013 19.5 0.4 1 23 888 910 888 910 0.98

17 18 0.029 3 8.9 4.5 1 23 920 942 920 942 0.98

18 18 4.6e-07 4.8e-05 24.0 1.3 1 23 948 970 948 970 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.4e-05	0.0098	16.7	1.4	1	23	468	490	468	490	0.96
2	18	2e-05	0.0021	18.8	1.9	1	20	496	515	496	518	0.94
3	18	3.1e-05	0.0032	18.2	0.7	1	23	524	546	524	546	0.98
4	18	7.6e-05	0.008	17.0	4.4	1	21	552	572	552	574	0.95
5	18	2.4e-05	0.0025	18.6	4.6	1	23	580	602	580	602	0.99
6	18	2.4e-05	0.0025	18.6	5.3	1	23	608	630	608	630	0.97
7	18	9e-06	0.00094	19.9	7.1	1	23	636	658	636	658	0.97
8	18	8.7e-08	9.1e-06	26.3	2.7	1	23	664	686	664	686	0.98
9	18	6.5e-05	0.0068	17.2	6.7	1	23	692	714	692	714	0.97
10	18	2e-05	0.0021	18.8	5.8	1	23	720	742	720	742	0.98
11	18	5.3e-07	5.6e-05	23.8	2.9	1	23	748	770	748	770	0.98
12	18	7.9e-06	0.00083	20.1	7.8	1	23	776	798	776	798	0.98
13	18	2.5e-05	0.0026	18.5	9.1	1	23	804	826	804	826	0.98
14	18	3.3e-05	0.0034	18.2	7.5	1	23	832	854	832	854	0.98
15	18	0.0016	0.16	12.9	8.8	1	21	860	880	860	882	0.94
16	18	1.2e-05	0.0013	19.5	0.4	1	23	888	910	888	910	0.98
17	18	0.029	3	8.9	4.5	1	23	920	942	920	942	0.98
18	18	4.6e-07	4.8e-05	24.0	1.3	1	23	948	970	948	970	0.97

Sequence Information

Coding Sequence: ATGAACGGGGAGCAGCATGCACTGCCAGCGACTACGCAGGGGCAGCAAGAGGAAGTAAACGTGGGTCAAAGTGGTCGCCCTTCGTATCCAAGTGGATTGGCGACTGGATCCGGTATTGGGAACATAGGAAGTATTCCCCATTCTTCGGCAGATCTTCGAGTAGGTACAGCAGTAGCGTTAGCCTCTTCGGTAGCTAAATATTGGGTCCTGACCAATCTATTTCCTGGGGCGCCGCTTCCTCAGGTTTCTGTATATCATCATCCGCATCATAATTCTCCGCATAGAAGTACTACGGCTGGCGGAGGCGGTGATTCTGCCAATAAAGAATCTGCcgctacttcttcttcttctttatctcAAGAAATGGCATTGGCACAAAATTCACATCAGCAGGCAACTACTTCACATCATCATCAACAAACTTCAGTTAATAACAACAATCAACATAATTCCCTACACTCAAATTCACAGATCCCAGTATCGCTGCCTGGTCTAAGTTTAGACGGTACTCATATACCCCCAAGCGTTAGCCATTTGCACGCAGCGCACGCCCAAATGCAGCAACAAATGCAATCCCAGCAGCAGCAATTGCatcagcagcaacagcagcagcaacaacaacagcagcagcagcagcagcagcagcagcagcagcagcaacaacagcagcaacaacaagcGCATCATCAAATGCAGAATCATCAGACTAGTCAAAATAGTGGACATAGTCCACAAAATCAGTCTAGCAATcagagagatgaaaataaagtaaaagaCGAAGGTGGAAGCTGTACTACTGAAAGATGTAGCGATAATCAAGTACATTGTCAAGTACAATGCGATTTACAGCTCCAACCACAGGCTCAAACTGATATGCAACAAAATTTAatgcagcagcaacaacaacaacaaattggTGTTAATATCGGCGGTAATAGTAACAACGATAGTGGCAATCAGAATAATCCCGATGGATTGAAAACTGAGAAGGACAAAGAAATGCGTCAACATAGTATGGCGCAATTCCAGTTACCTGATCTTAAACCTGGCGGACATATGATGGATGTCAGAACAGCGGATGGTTCAGTTGTGAAAATAAGTGCAGGTAGCGAGCAGGATCTTGCTAAAACACTCGGCGTGGAAATGGTTCAAAATATGTACAAGGTCAACGTTGAAGATATAAATCAGCTCTTAGCATACCATGAAGTTTTTGGTAAACTACAGAGCGAAATTGCCGCCGGAACTACGCTTGTTGGCGGTACTGTTCCTACTCAAACAGTTACTACTATTCAAAACGGTACTCCGATCGTACAACAAGTTCaattaaataaatttgatatcAAAACTAGCGACGGAGAAGCTACCCCTGGACCAAGCGCTTCTCCTGTATCAGTCGGAAGCCATGCTTGCGAAGTTTGCggaaagatttttcaattccgttATCAACTGATTGTTCATCGCAGATATCATACTGAAAGAAAACCTTTTACGTGTCAGGTGTGTGGTAAAGCGTTCACAAATGCAAACGACCTGACACGCCATGGTAAGTGTCACCTCGGTGGATCGATGTTTACCTGCGCAGTTTGTTTCCACGTTTTTGCTAACGCACCGTCATTGGAACGACATATGAAAAGACACGCGACCGACAAACCTTACAATTGTACTGTTTGCGGTAAAAGTTTTGCAAGGAAGGAACACTTGGATAATCATACGCGATGTCATACCGGGGAAACTCCTTACAGATGCCAGTACTGCGCGAAAACGTTCACCAGAAAAGAACACATGGTGAATCACGTGAGGAAACATACGGGTGAAACTCCGCATCGATGTGATATATGCAAGAAAAGTTTTACCAGAAAAGAACATTTCATGAATCACGTTATGTGGCATACGGGTGAGACTCCTCATCATTGCCAAGTTTGCGGAAAGAAATATACTCGGAAGGAACATCTGGCTAATCATATGCGATCACATACTAACGATACACCCTTCCGTTGTGAAATCTGTGGTAAGTCGTTCACGAGGAAGGAGCACTTCACGAACCACATAATGTGGCATACTGGAGAGACTCCGCATCGATGTGACTTCTGTTCAAAGACGTTTACAAGGAAGGAGCACCTATTGAATCACGTTCGACAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAATCACATCCGCCAACACACAGGTGAGACGCCATTCCGTTGCCAGTACTGCCCGAAGGCGTTCACTCGTAAGGATCATTTGGTCAATCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACATACAGGCGAATCGCCACACAGATGCCACTTCTGCTCCAAGTCGTTCACTCGCAAGGAACATCTGACCAATCATGTTCGTATACATACCGGAGAGTCACCTCATAGATGCGAATTCTGCCAGAGGACATTCACCAGGAAAGAACATCTTAATAATCATCTCCGACAACATACCGGCGAATCTTCTCATTGCTGTAACGTCTGCTCTAAACCATTTACACGAAAGGAACACCTCGTGAATCACATGAGATGTCATACTGGCGAACGTCCATTCGTTTGTACCGAATGCGGCAAGAGTTTTCCACTGAAAGGAAATCTCCTGTTTCATATGCGCTCTCATAATAAAGGGAGCAACGCGGAGAGACCATTCAGATGTGATCTTTGTCCGAAAGATTTTATGTGCAAAGGTCACTTAGTATCTCATAGACGTTCACATTCGGACGAAAGACCTCACAGCTGTCCTGATTGCGGTAAAACTTTTgttgaaaaaggaaatatGCTTAGGCATCTTAGAAAACATGCCGCTGAAGGACCTCCCACTCAAGTTACTACACCTTCTGCTATACCGCAACCAGGAGTTTTGCCTATTCCTACTGCTGCTGTTTTAGTTGGACATCCATTGGCTCCTCCTGCGCCACCTGTTGTACCCCAACATACCGTAGTCGTGCCGACGCCACCCGGAGTTTTAACTTCATATTga
Protein Sequence: MNGEQHALPATTQGQQEEVNVGQSGRPSYPSGLATGSGIGNIGSIPHSSADLRVGTAVALASSVAKYWVLTNLFPGAPLPQVSVYHHPHHNSPHRSTTAGGGGDSANKESAATSSSSLSQEMALAQNSHQQATTSHHHQQTSVNNNNQHNSLHSNSQIPVSLPGLSLDGTHIPPSVSHLHAAHAQMQQQMQSQQQQLHQQQQQQQQQQQQQQQQQQQQQQQQQQQQAHHQMQNHQTSQNSGHSPQNQSSNQRDENKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPQAQTDMQQNLMQQQQQQQIGVNIGGNSNNDSGNQNNPDGLKTEKDKEMRQHSMAQFQLPDLKPGGHMMDVRTADGSVVKISAGSEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGESSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVTTPSAIPQPGVLPIPTAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00060523;
80% Identity: -