Basic Information

Insect: Phylloecus xanthostoma
Gene Symbol: -
Assembly: GCA_030142555.1
Location: JARQTF010000300.1:2660833-2664246[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.55 37 5.0 0.2 2 23 91 113 90 113 0.76

2 12 5.7 3.9e+02 1.8 0.1 5 23 419 438 418 438 0.83

3 12 1.8 1.2e+02 3.4 0.4 1 23 562 584 562 584 0.88

4 12 0.098 6.7 7.4 0.1 5 20 670 685 668 687 0.91

5 12 0.15 10 6.8 2.8 1 23 845 867 845 867 0.91

6 12 0.98 66 4.3 0.9 2 20 898 916 897 918 0.90

7 12 0.00033 0.023 15.2 0.8 1 23 932 955 932 955 0.97

8 12 0.0018 0.12 12.8 3.7 1 23 962 985 962 985 0.95

9 12 0.00012 0.0083 16.5 3.6 1 23 1014 1037 1014 1037 0.96

10 12 0.26 17 6.1 1.2 2 23 1042 1062 1041 1062 0.95

11 12 0.0038 0.26 11.8 2.4 2 23 1070 1092 1069 1092 0.91

12 12 0.016 1.1 9.9 0.2 2 23 1097 1119 1096 1119 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.55	37	5.0	0.2	2	23	91	113	90	113	0.76
2	12	5.7	3.9e+02	1.8	0.1	5	23	419	438	418	438	0.83
3	12	1.8	1.2e+02	3.4	0.4	1	23	562	584	562	584	0.88
4	12	0.098	6.7	7.4	0.1	5	20	670	685	668	687	0.91
5	12	0.15	10	6.8	2.8	1	23	845	867	845	867	0.91
6	12	0.98	66	4.3	0.9	2	20	898	916	897	918	0.90
7	12	0.00033	0.023	15.2	0.8	1	23	932	955	932	955	0.97
8	12	0.0018	0.12	12.8	3.7	1	23	962	985	962	985	0.95
9	12	0.00012	0.0083	16.5	3.6	1	23	1014	1037	1014	1037	0.96
10	12	0.26	17	6.1	1.2	2	23	1042	1062	1041	1062	0.95
11	12	0.0038	0.26	11.8	2.4	2	23	1070	1092	1069	1092	0.91
12	12	0.016	1.1	9.9	0.2	2	23	1097	1119	1096	1119	0.93

Sequence Information

Coding Sequence: ATGGACAATTTTCAgcaatataaaacaaaatacaactTAAAGGAGCCACTTATTTTGTTGGAACGATgtgataaaatattcaacacACCGGAGCTGATTAGGCGTTTAGATAACACCGCAGTTAATAGGAAAGACAATGCAGaaattgaagataaatattcttcGGATAAATCTATATCGCCATACATTAAGTATCAACCTTTGTTATGCAATGGTAACGGTCAACTtccatatttcaatttatctatAAAACAGTCAAAGTCGCTCATTCCATGTGAAATATGTGGGAAACAATTCTTAACTACCAGAAGCAAGAATGTTCATGCTATAAGACTTCACGGGGTCTCTTTAGTAGCTAAAACTCAACGCAAACGTAATACAAGTAGTAATCAAAGTTCTAAACATTTGGAGGATTCACAAAATGCCAAGATTTTTGATAAAACGAAAAGTACAACAACTCTAACAAAGAAGACggacaaaattgaaaataatgacgatTCGTTACACGGTGTTAAAGCTACGTCAGAAATTACTGAACAAACATCGACAGCTGGAGACACAGGAATACACTCTAATCAGAATaagactgaaaataaaaatgaaatgaaagtaTCTAAAAGTCAGACAAGTTGCAAGAAGAAAACTGACGATAGAGCAACTGCAGTcaccaaaataaataatagggcgaagggaaataaaaagaacctAAAGCCATTGAACGCACTGAGTCTATTAAAGCATAAAGACAATAAGGTTATAACAAAGAGCATTACAAGAACTCCAAAGAGCCCTGGAAAGTGTCTTAAAAGTAGTCCTCCCAAGAGTCCTGCAAAAAGTCCAAAAGCAAATCAGGGAACATGGTCAGTGTCTAATAGTCCTGCAagaaatctattaaaaaattttatgatttctagTCCTGAACAGACTCTTATGAGAAGGTGGCTCATGAGTGATCAAACTTCTAGCATATCAACATCAGAACCACTAATCAAACgaatcaaaattgaaaaagatgatACAGAAATTCCTCTCAAAGTACAAGATGAAACCGAATCTGGAAGATGTACTCCTATAATGAATAACAAGATCAGTGAACGAATCAATAATTCTGAAACTTCATCGAACCATGAGGTTACAAGTACTGTAACCGATACCCCTGATAACAGTATCTCTAATAATTTGCCATTATCTGAACGTAATAAAACAGTTTTACGCCATAATGGTATGACAATGCTACCACCGCCGGCATACGTTATATGCACGTTGTGTGGCAACACGAgcgacaatataaaaaaacacatCGTAGAATATCATAAGGTCACAGAACCATCTCTTTTAGTTCAAGAGTCTATTGCACAGTCGTATTTTGAAGACCTTATGGGATCCgctgacaaagagaaagatcaAACGTATAAATCAGACATTGAATCCAAGTCACAAGATAAAAGACGATcccaaaaaagaaagagacctAACACTTCCGAAACTGATGAGATTACAAAGGAAGAGAGTCAACCAAGTGCCAAGAAATCAAAACCAAATAAACCAAGTCCAGCATCTACGAAAATAAGTAACAAAACTACAAAAGACAACAATGATACACGATTGGAGAGGAAATCTTCAACGGAGAGCaattcaaagaagaagaaaagaagtgaGAAGAAAGCTAAtgcatatacagtatataactGTAATATATGTCAAAGGATAATTCATGGCAAATATCGTTTGGAGGTTCACGAAGAAGCACATACAAGACGTGGTGAGAcattggaaaatttaaaagattctACTGAGAAATCATCTCACAAATCAAATCGAAAGTCCAAGAAGCAGAACGGAGCTAAATCCTTAGAGCCCATGACTCACAATACAACTGAGTTGAATGGAGTCGATGAATCTGTTAAACAAGCAAGTACAAAGAAGGGAAAGAGCTCGAAACAGTCAAAGGTCAAACAAAAGATACAAGAGGAACCTCGTCATAGTGAATATTTCCTTAGTAAATGTACATgtggaaaatcattttcaagtGTGACAGCATTGGAGGAGCATAAGATATATTGTGACTCCAATAACAGAGAATCTGATGCAAATCAGTCCATTGAATCTCCTACTGGAAGAGTATCAAGCCATGGCTTAAGTCtcacgataaaaaagaaaaataattcgtatGAAATAGTTCATAAGGATATTGTTGACGAGGAGATGTCCAATGTTTCCAGTTATACTAAGACAGATGAATTATCATCTACGATCTCCGTAACGAGTTCAGAAAATGCAGCCATAGAAAATTCGCCGACTATTAAGAAAGAAGTAATGGATTTCGAAGAAGATcagaataatttgaataattttccaaattttttgttgaatATGGAAATGCCAAAAGAAGACAACAATAATATTCCAATAGGCGCGATTGAAAAGAACCAAGAGGACACTGAGAAAAGGCCAGCAGATCTTAAAACCCTTCGGCTAGTTGGCGAAGACACTCTGAGCAGTGAAAATATAACCTCACAAATTGTGAATGATCATAGGTGCATCTTGTGTGAGAAATTCTTCTCTAGTAAATCTAAAATCATGAAACACTGGTCAGAACACGTTCTAGAGATGTTATGCGATTGCGAAGAGAATATCCTAAACATGCAAGAGTACGAAGATCACATTCACAAAATTCATCCAAAGATTGTGACATGTGGATATTGtgcaaaaaaatttgaaactcTGTTTGACTTTGGTGAACATCGATGTGACGTTACTAAAGGAAAACCCTTAGACAGTTTGCAATCGCTGTACCCTTGCTTAAAGTGCAACAAAAACTTCAGGCAGGGCACCTACTTGGATCGTCATATTCAGAGTATTCACCCAAATGTTGTAAACCTTTTTCAATGCTATAATTGTTCACAGCGGTTTTCTACCAaagacgagagaaaaaaacacaTGACAGAATTTCACGTGAAGAATAAATGTAGTATCTGTTACAAACTGTGTACTCATAAATTGAAGAACAAGCACGAGTCTTATCATCATGGATTGGGCTTCCCTTGTCACGTGTGTAAGAAGGCTTACTCGAACAAAGAGTCCTTTACGCATCATGTAATGGTTACGCATATAAGTAAGATAGAATGTGTTATAtgtaaaaagattttaaaggCGTCTTCCTTCAAGAAACATTTCAAACGTCACCAGAATGAGGATGGTTTGTTGCAATGTATATTGTGCAAAAGGACCTTCTCTACTAAcgaggaattaattaatcatcacatgaaaaaacataattttgaGAAGTCCTGTGAAATCTGtggaatgaattttcttacaaAGTCCAGCGTGCAACAGCATATTGCCAATGTGCATTCGAACgtatatgaaaatagaaacatCGTTAAAGAAGAGGTGACGCTTGAAAGTTAA
Protein Sequence: MDNFQQYKTKYNLKEPLILLERCDKIFNTPELIRRLDNTAVNRKDNAEIEDKYSSDKSISPYIKYQPLLCNGNGQLPYFNLSIKQSKSLIPCEICGKQFLTTRSKNVHAIRLHGVSLVAKTQRKRNTSSNQSSKHLEDSQNAKIFDKTKSTTTLTKKTDKIENNDDSLHGVKATSEITEQTSTAGDTGIHSNQNKTENKNEMKVSKSQTSCKKKTDDRATAVTKINNRAKGNKKNLKPLNALSLLKHKDNKVITKSITRTPKSPGKCLKSSPPKSPAKSPKANQGTWSVSNSPARNLLKNFMISSPEQTLMRRWLMSDQTSSISTSEPLIKRIKIEKDDTEIPLKVQDETESGRCTPIMNNKISERINNSETSSNHEVTSTVTDTPDNSISNNLPLSERNKTVLRHNGMTMLPPPAYVICTLCGNTSDNIKKHIVEYHKVTEPSLLVQESIAQSYFEDLMGSADKEKDQTYKSDIESKSQDKRRSQKRKRPNTSETDEITKEESQPSAKKSKPNKPSPASTKISNKTTKDNNDTRLERKSSTESNSKKKKRSEKKANAYTVYNCNICQRIIHGKYRLEVHEEAHTRRGETLENLKDSTEKSSHKSNRKSKKQNGAKSLEPMTHNTTELNGVDESVKQASTKKGKSSKQSKVKQKIQEEPRHSEYFLSKCTCGKSFSSVTALEEHKIYCDSNNRESDANQSIESPTGRVSSHGLSLTIKKKNNSYEIVHKDIVDEEMSNVSSYTKTDELSSTISVTSSENAAIENSPTIKKEVMDFEEDQNNLNNFPNFLLNMEMPKEDNNNIPIGAIEKNQEDTEKRPADLKTLRLVGEDTLSSENITSQIVNDHRCILCEKFFSSKSKIMKHWSEHVLEMLCDCEENILNMQEYEDHIHKIHPKIVTCGYCAKKFETLFDFGEHRCDVTKGKPLDSLQSLYPCLKCNKNFRQGTYLDRHIQSIHPNVVNLFQCYNCSQRFSTKDERKKHMTEFHVKNKCSICYKLCTHKLKNKHESYHHGLGFPCHVCKKAYSNKESFTHHVMVTHISKIECVICKKILKASSFKKHFKRHQNEDGLLQCILCKRTFSTNEELINHHMKKHNFEKSCEICGMNFLTKSSVQQHIANVHSNVYENRNIVKEEVTLES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00770699; iTF_01199003;
90% Identity: iTF_00770699;
80% Identity: -