Basic Information

Insect: Phylloecus xanthostoma
Gene Symbol: -
Assembly: GCA_030142555.1
Location: JARQTF010000119.1:322743-332150[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 9.5e-05 0.0064 16.9 1.4 1 23 437 459 437 459 0.96

2 16 2e-05 0.0014 19.0 1.9 1 20 465 484 465 487 0.94

3 16 1.5e-05 0.00099 19.4 1.2 1 23 493 515 493 515 0.98

4 16 7.7e-05 0.0052 17.2 4.4 1 21 521 541 521 543 0.95

5 16 2.4e-05 0.0016 18.8 4.6 1 23 549 571 549 571 0.99

6 16 2.4e-05 0.0016 18.8 5.3 1 23 577 599 577 599 0.97

7 16 9.1e-06 0.00061 20.1 7.1 1 23 605 627 605 627 0.97

8 16 3.2 2.2e+02 2.6 0.3 1 9 633 641 633 641 0.89

9 16 5.4e-07 3.6e-05 24.0 2.9 1 23 643 665 643 665 0.98

10 16 8e-06 0.00054 20.3 7.8 1 23 671 693 671 693 0.98

11 16 2.5e-05 0.0017 18.7 9.1 1 23 699 721 699 721 0.98

12 16 3.3e-05 0.0022 18.3 7.5 1 23 727 749 727 749 0.98

13 16 0.0016 0.11 13.0 8.8 1 21 755 775 755 777 0.94

14 16 1.2e-05 0.00082 19.7 0.4 1 23 783 805 783 805 0.98

15 16 0.029 2 9.1 4.5 1 23 815 837 815 837 0.98

16 16 4.7e-07 3.2e-05 24.1 1.3 1 23 843 865 843 865 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	9.5e-05	0.0064	16.9	1.4	1	23	437	459	437	459	0.96
2	16	2e-05	0.0014	19.0	1.9	1	20	465	484	465	487	0.94
3	16	1.5e-05	0.00099	19.4	1.2	1	23	493	515	493	515	0.98
4	16	7.7e-05	0.0052	17.2	4.4	1	21	521	541	521	543	0.95
5	16	2.4e-05	0.0016	18.8	4.6	1	23	549	571	549	571	0.99
6	16	2.4e-05	0.0016	18.8	5.3	1	23	577	599	577	599	0.97
7	16	9.1e-06	0.00061	20.1	7.1	1	23	605	627	605	627	0.97
8	16	3.2	2.2e+02	2.6	0.3	1	9	633	641	633	641	0.89
9	16	5.4e-07	3.6e-05	24.0	2.9	1	23	643	665	643	665	0.98
10	16	8e-06	0.00054	20.3	7.8	1	23	671	693	671	693	0.98
11	16	2.5e-05	0.0017	18.7	9.1	1	23	699	721	699	721	0.98
12	16	3.3e-05	0.0022	18.3	7.5	1	23	727	749	727	749	0.98
13	16	0.0016	0.11	13.0	8.8	1	21	755	775	755	777	0.94
14	16	1.2e-05	0.00082	19.7	0.4	1	23	783	805	783	805	0.98
15	16	0.029	2	9.1	4.5	1	23	815	837	815	837	0.98
16	16	4.7e-07	3.2e-05	24.1	1.3	1	23	843	865	843	865	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCATTGCCAGCGACTACGCAGGCTCAGCAAGAGGAAGTAAACTCGGGTCAAAGTGGTCGTCCTTCGTACCCAGGTGGTTCGACTAGTTCAAGCAGTCACGGCAATGTAGGAAGTACACGGAATTCCTCGGAGGAGCAACGTGTAGGTACAGCAGTAGCGTTAGCTTCCTCGGTAGCTAAATATTGGCTCTTCACCAATCTGTTTCCCGGGCCGCTACCCCAGGTCTCGGTCTACCACCATAACCACCAGATCTCCTCGGGTAGGAGTGGTGATGGTGTTGAGGCATCTTCAAAAGAGTCTTCGTTTAACCAGGAAATGGCGTTGACCTCGAATTCGCATCATCAGTCGACGACTtcccatcatcatcatcaagcTTCGATTAGCGGCGCTGGTCATCACGGCTCTCTGCAGTCCAATCAGCAGATTCCAGTCTCTCTTCCTGGCCTTAGTCTAGACGGGACTCACATTCCCGCAAGTGTCAGTCACTTGCAGGCGGCGCATGCTCAAATGCAGCAGCAGATGCAGtcgcaacagcagcagcagctgcaCCAGCAGccacagcagcaacagcaacaggcTCATCACCAGATGCAACAGAGTCATCAGAATGCACAGAACAGTGGACCAAGCTCGCAGAGTCAGAACTCACAACGGGATGATAATAAAGTAAAGGACGAGGGTGGTAGTTGCACTACGGAACGGTGCAGCGATAATCAAGTCCATTGTCAGGTCCAGTGTGATCTGCAGCTACAGCCGCCACAGGATCTTCAGCAGAGCCTcatgcagcagcagcaacagcaacaacaaattGGGGTCAACATTAGTGGCAGTTCCACTGCAGAAAGCGGAACTCAGAACAATTCAGACAAGCccgagaaggagaaagaattGCGACAGCTTAACATGGCACAATTTCAACTTCCTGATCTTAAACCTGGGGGTCATATGATGGACGTTAGAACAGCCGACGGCTCGGTCGTTAAAATAAGTGCTGGAAACGAACAAGATCTTGCAAAGACTCTTGGTGTAGAGATGGTACAAAATATGTACAAGGTCAACGTCGAGGATATCAATCAACTGTTGGCCTATCACGAGGTCTTCGGGAAGCTGCAAAGTGAGATAGCAGCTGGCACCACTCTCGTAGGTGGTACCGTACCCACGCAAACGGTCACCACCATCCAAAATGGAACACCGATAGTACAGCAAGTTCAGCTGAACAAGTTTGACATAAAGACAAGCGACGGAGAGGCCACGCCCGGACCAAGTGCCTCGCCCGTATCCGTTGGCAGTCATGCCTGCGAGGTCTGCGGCAAGATCTTCCAGTTTCGCTATCAGCTTATCGTGCACCGAAGATATCATACTGAAAGGAAGCCATTCACGTGCCAGgtCTGCGGAAAAGCTTTCACCAATGCCAATGATCTAACTCGCCATGGTAAATGTCATCTGGGTGGATCCATGTTTACCTGTTCAGTTTGCTTCCACGTGTTCGCTAACGCGCCATCTTTGGAGCGTCATATGAAGCGTCACGCTACCGACAAGCCCTACAATTGTACAGTGTGCGGAAAGAGTTTCGCTAGGAAGGAACACCTGGACAACCATACTCGCTGTCACACCGGCGAAACACCTTACAGGTGTCAGTATTGCGCGAAAACTTTCACTCGCAAGGAGCACATGGTGAATCATGTTCGCAAGCATACTGGCGAGACTCCACATCGCTGCGACATATGCAAGAAGAGCTTCACTCGCAAGGAACACTTCATGAATCATGTCATGTGGCATACTGGTGAGACTCCGCATCATTGCCAGGTCTGCGGAAAAAAATACACGCGCAAGGAGCACCTTGCTAATCATATGCGTTCCCATACCAACGACACGCCATTCCGATGCGAGATTTGTGGGGAGACGCCCTTCCGCTGTCAATACTGTCCGAAAGCGTTTACGCGAAAGGACCATCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACCAATCACGTGCGTCAACATACAGGCGAGTCGCCACATCGATGCCACTTCTGCTCCAAGTCATTTACACGTAAGGAGCACTTGACGAATCACGTCAGAATCCACACCGGTGAATCGCCACATAGGTGTGAATTCTGTCAGAGGACGTTCACTCGGAAAGAACACCTCAATAATCATCTCCGTCAACATACCGGAGATTCGTCACATTGTTGCAATGTGTGCTCCAAACCGTTCACGAGAAAGGAACATCTCGTGAACCACATGCGATGTCACACTGGCGAACGTCCGTTTGTCTGCACCGAGTGTGGCAAGAGTTTTCCGCTCAAGGGAAATCTGCTATTCCATATGCGATCCCACAATAAGGGAAGCAACGCTGAGAGACCGTTCCGCTGTGACCTTTGTCCCAAAGACTTCATGTGCAAGGGTCATCTGGTCTCGCACAGAAGATCCCACTCGGACGAGCGACCGCACAGCTGTCCGGACTGTGGCAAGACCTTCGTCGAGAAGGGCAACATGCTGAGACATCTACGAAAGCACGCTGCGGAAGGTCCACCTACGCAGGTCAGCACACCCTCGGCAATTCCTCAACCGGTTCTGCCGATACCCGCTGCCGCGGTACTGGTTGGACATCCTCTGGCTGCTCCGCAACCGCCTCCGGTCGTTCCTCAGCATACCGTCGTGGTTCCAACACCTCCTGGTGTACTGACGTCGTACTAA
Protein Sequence: MNSEQHALPATTQAQQEEVNSGQSGRPSYPGGSTSSSSHGNVGSTRNSSEEQRVGTAVALASSVAKYWLFTNLFPGPLPQVSVYHHNHQISSGRSGDGVEASSKESSFNQEMALTSNSHHQSTTSHHHHQASISGAGHHGSLQSNQQIPVSLPGLSLDGTHIPASVSHLQAAHAQMQQQMQSQQQQQLHQQPQQQQQQAHHQMQQSHQNAQNSGPSSQSQNSQRDDNKVKDEGGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQQQIGVNISGSSTAESGTQNNSDKPEKEKELRQLNMAQFQLPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNANDLTRHGKCHLGGSMFTCSVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQPVLPIPAAAVLVGHPLAAPQPPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00773969;
80% Identity: -