Plin006758.1
Basic Information
- Insect
- Phylloecus linearis
- Gene Symbol
- pnr
- Assembly
- GCA_030142575.1
- Location
- JARQTE010000306.1:680278-686219[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 2.7e+03 -1.9 0.1 3 12 231 245 230 252 0.67 2 2 9.6e-17 2.5e-13 49.4 5.1 1 35 418 451 418 452 0.98
Sequence Information
- Coding Sequence
- ATGTTCAATGTACCGCCCAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCATCGGACGGTGTCAAGTTGTCCATTTTCGAGGAGGAAGGTGCCCAGCGGAACTTTGCCGACAAGATACTTACGTGCCTCGCTATTACGGTAAAGGATGGAGACTCTTTGCCACCAATTATCTGCCACCGATGCGTGTACAAATTGGATATACTGCACAATTTTCGTGAAGTCTCACGCAAATCCGATGTCATACTCAAACAGTACCTGGACTATGCTAAGCAGTTGTCGTCCCAGGACGATCagGAAAAGTCTTTCTCCACTGCCAAAGTAGCAGACTTAAGCCCACTCCAGTCGTTTCTCCAGTTGAACAAAACCCTGTTTAACGAGGAGCCCAATTCTCCGGCCAGCATTAATCAAAACTTAATACCTCAAACTCAGACTCATCATCTGGAACTACGGGCCAACGAGATGCCCGAACAGGAGAACATAAAATGCGAACCAGAGGACGACACGTGCTCGAACAGCTCGGATCCAGACAGATTGGAGATTGAGGACCGCGACGAGCAGGAGAGCGACGGTGAGGAGAATGGCTACGATATGACTGTTAACAAAAGGATCAAGATGGAGACCGGTTACGAGAGCTCAAAACAGAGTACACCAAATCGTAGTCCGGTCAATAGAATGGATACTCCCGAGAGCAATTGTTCGGATACTCACATCGACCAGGAAACCACAAAGCTCTGGCAAGCACTGGCAAAtaaCAGGAGTCTTGAAATAACAAGGACAAATGGCGACAAGCTGAACAACGGGTTTACCGGCGAGGCGACCAATCTATTGCGCTCTCTAATTAACAACAGGCACATTGGTATTACTCCAGTGGACACCGACAGGATTTCACCTCAAATAAGATTCTACAGGGACACCCAGGGAACGACGATCGAACGTACGGTTCCCGATTGTTCTGTCCTGGGTAATCGTACAAATATGCCCTGCGTTGAGAATAAGAGTGCCTCCATGGATAGTAATCCATCCAGTCCTGCCAGTGTTGGCCGGAAGGAAACAAAGGGTCGACGGAAACAGAGTTATCCCAGCAAAGCTCCTACCAGTCCTGATGTCATTCACTATCAGCAGGAATCTAACGAGGAACAGGCCCAGGACTTCACTGCGTGGTCGAGCAAGATGAAAGGAAAgCAAGTCGAGGATCAGAAGCAGCAGTTCGATCAGCAGGGTGGTAACGCCACGAAGAAGATGGACATGTCCTGCACGAACTGCGGGACCATGACCACTACGATTTGGCGGCGAAATATGAAGGGTGAGATGGTTTGCAACGCGTGCGGTCTTTACTACAAGCTACACGGGGTGAATCGTCCTGTAACAATGAGAAGGGACACTATTCATACGCGTAGACGTCGACCCAAGGGCGAGAAACCTACCAGGCACAGAAaaaaaggCGAGACGATATTGCCTACTCAGTCTGAGCAGATGGATGCTGAAAGTGCGGACATGTTGGCAGCACTTCGTAGACAGATACAACCTCATCTCATGATGGCGGCACTTACTCCTCCGCGTATACCTGGTGCACACGCGCATCCACCGCCACCTACTGCACAGCTCAATTATTCACTTCCCATACCCAGTTACATGATGCACCACGTCAAAACTGAGGGAAGAGAGCAGCAACGTCATTCGCCCGACGACGTAGAGGAACCCGACGACGGGGACGAGGAAAACGTCTCCGATGTCCCGTTGAACCTGGTCGCCACCACCCTATCCGAGGAGACACACTGA
- Protein Sequence
- MFNVPPKFYELCRLCLSSDGVKLSIFEEEGAQRNFADKILTCLAITVKDGDSLPPIICHRCVYKLDILHNFREVSRKSDVILKQYLDYAKQLSSQDDQEKSFSTAKVADLSPLQSFLQLNKTLFNEEPNSPASINQNLIPQTQTHHLELRANEMPEQENIKCEPEDDTCSNSSDPDRLEIEDRDEQESDGEENGYDMTVNKRIKMETGYESSKQSTPNRSPVNRMDTPESNCSDTHIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRHIGITPVDTDRISPQIRFYRDTQGTTIERTVPDCSVLGNRTNMPCVENKSASMDSNPSSPASVGRKETKGRRKQSYPSKAPTSPDVIHYQQESNEEQAQDFTAWSSKMKGKQVEDQKQQFDQQGGNATKKMDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGETILPTQSEQMDAESADMLAALRRQIQPHLMMAALTPPRIPGAHAHPPPPTAQLNYSLPIPSYMMHHVKTEGREQQRHSPDDVEEPDDGDEENVSDVPLNLVATTLSEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00255490;
- 90% Identity
- iTF_00254750;
- 80% Identity
- iTF_01199812;