Cpal009539.1
Basic Information
- Insect
- Calameuta pallipes
- Gene Symbol
- pnr
- Assembly
- GCA_030142375.1
- Location
- JARQSW010000561.1:171734-177751[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 3.1e+03 -1.9 0.1 3 12 231 245 230 252 0.67 2 2 9.6e-17 2.8e-13 49.4 5.1 1 35 417 450 417 451 0.98
Sequence Information
- Coding Sequence
- ATGTTCAATGTACCGCCCAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCGTCGGACGGTGTCAAGTTGTCCATTTTCGAGGAGGAAGGCGCCCAGCGGAACTTTGCCGACAAGATACTTACGTGCCTCGCGATTACGGTGAAGGATGGAGACTCTTTGCCACCAATCATCTGCCATCGATGTGTGTACAAATTGGATATACTACACAATTTCCGTGAAGTCTCACGCAAATCGGATGTCATACTCAAACAGTACCTGGACTATGCTAAGCAGTTGTCGTCCCAAGACGATCAGGAAAAGTCTTTCTCCACTGCCAAAGTAGCAGACTTAAGCCCACTCCAGTCGTTTCTCCAATTGAACAAAACCCTGTTCAACGAGGAGCCCAATTCTCCGGCCAGCATTAATCAAAACGTAATACCTCAAACTCAGACTCATCATCTGGAACTACGGGCCAACGAGATGCCCGAGCAGGAGAACATAAAGTGCGAACCGGAGGACGACACGTGCTCGAACAGCTCGGATCCCGATAGATTGGAGATTGAGGATCGCGACGATCAGGAGAGCGACGGCGAGGAGAATGGCTACGATATGACTGTTAACAAAAGGATCAAGTTGGAGGCCGGTTACGAGAGCTCGAAACAGAGCACGCCAAATCGTAGTCCGGTCAATAGAATGGACACCCCCGAGAGCAATTGCTCGGATACTCACATAGACCAGGAGACCACAAAGCTCTGGCAAGCACTGGCAAAtaaCAGGAGCCTCGAAATAACAAGGACAAATGGCGACAAGTTGAACAACGGTTTTACCGGCGAGGCAACCAATCTGCTGCGCTCTCTAATTAACAACAGGCACATTGGCATTACTCCGGTGGACGCCGACAGGATTTCACCTCAAATAAGATTCTACAGGGATACCCAAGGAACGACGATCGAACGTACGGTTCCCGATTGTTCTGTCCTGGGTAATCGTACGAATATGCCCTGCGTTGAGAATAAGAGTGCCTCCATGGATAGCAATCCATCCAGTCCTGCCAGTGTTGGCCGGAAGGAAACAAAGGGTCGACGGAAACAGAGTTATCCCAGCAAAGCTCCTACCAGTCCTGATGTCATTCACTATCAGCAGGAATCTAACGAGGAACAGGCGCAGGATTTCACAGCGTGGTCGAACAAGATGAAGGGAAAGGTCGAGGATCAGAAGCAGCAGTTCGATCAGCAGGGTGGCAACGCCACGAAGAAGATGGACATGTCCTGCACGAACTGCGGGACCATGACCACTACGATTTGGCGACGAAATATGAAGGGTGAGATGGTATGCAACGCGTGCGGTCTTTACTACAAGCTACACGGGGTGAATCGTCCTGTTACGATGAGAAGGGACACTATTCATACGCGTAGACGTCGACCCAAGGGCGAGAAACCTACCAGGCACAGAAaaaaaggCGAGACGATATTGCCTACTCAGTCCGAGCAGATGGATGCTGAGAGTGCTGACATGTTGGCAGCTCTGCGTAGACAAATACAACCTCATCTCATGATGGCGGCACTTACTCCTCCGCGTATACctggtgcgcatgcgcatccACCGCCACCTACTGCACAGCTCAATTATTCGCTTCCCATACCCAGTTACATGATGCACCACGTCAAAACTGAGGGAAGAGAGCAGCAACGTCACTCGTCCGACGACGTGGAGGAACCCGACGACGGGGACGAGGAAAACGTTTCCGACGTTCCGTTGAACCTGGTCGCCACCACCCTGTCCGAGGAGGCACACTGA
- Protein Sequence
- MFNVPPKFYELCRLCLSSDGVKLSIFEEEGAQRNFADKILTCLAITVKDGDSLPPIICHRCVYKLDILHNFREVSRKSDVILKQYLDYAKQLSSQDDQEKSFSTAKVADLSPLQSFLQLNKTLFNEEPNSPASINQNVIPQTQTHHLELRANEMPEQENIKCEPEDDTCSNSSDPDRLEIEDRDDQESDGEENGYDMTVNKRIKLEAGYESSKQSTPNRSPVNRMDTPESNCSDTHIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRHIGITPVDADRISPQIRFYRDTQGTTIERTVPDCSVLGNRTNMPCVENKSASMDSNPSSPASVGRKETKGRRKQSYPSKAPTSPDVIHYQQESNEEQAQDFTAWSNKMKGKVEDQKQQFDQQGGNATKKMDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGETILPTQSEQMDAESADMLAALRRQIQPHLMMAALTPPRIPGAHAHPPPPTAQLNYSLPIPSYMMHHVKTEGREQQRHSSDDVEEPDDGDEENVSDVPLNLVATTLSEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00255490;
- 90% Identity
- iTF_01199812; iTF_00292610; iTF_00770775; iTF_01199072; iTF_01395522; iTF_01131237; iTF_00293385; iTF_00298740; iTF_00296442; iTF_00294910; iTF_00295678; iTF_00297215; iTF_01474347; iTF_01475119; iTF_01473586; iTF_00297974; iTF_00294138; iTF_00291961; iTF_01475868;
- 80% Identity
- -