Basic Information

Insect: Phylloecus linearis
Gene Symbol: salm
Assembly: GCA_030142575.1
Location: JARQTE010000522.1:381387-391266[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 6.5e-06 0.00046 20.5 0.9 1 23 497 519 497 519 0.98

2 9 1.3e-05 0.0009 19.6 2.1 1 23 525 547 525 547 0.98

3 9 0.081 5.7 7.6 3.8 2 23 1009 1030 1008 1030 0.98

4 9 5.6e-08 3.9e-06 27.0 0.6 1 23 1036 1058 1036 1058 0.97

5 9 7.8e-05 0.0055 17.1 2.6 1 23 1068 1090 1068 1090 0.98

6 9 0.0027 0.19 12.3 1.9 2 23 1478 1499 1477 1499 0.97

7 9 0.041 2.8 8.6 0.8 1 14 1505 1518 1505 1520 0.92

8 9 1.3e-06 9.3e-05 22.7 2.1 3 23 1721 1741 1719 1741 0.96

9 9 2.6e-07 1.8e-05 24.9 0.9 1 23 1747 1769 1747 1769 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	6.5e-06	0.00046	20.5	0.9	1	23	497	519	497	519	0.98
2	9	1.3e-05	0.0009	19.6	2.1	1	23	525	547	525	547	0.98
3	9	0.081	5.7	7.6	3.8	2	23	1009	1030	1008	1030	0.98
4	9	5.6e-08	3.9e-06	27.0	0.6	1	23	1036	1058	1036	1058	0.97
5	9	7.8e-05	0.0055	17.1	2.6	1	23	1068	1090	1068	1090	0.98
6	9	0.0027	0.19	12.3	1.9	2	23	1478	1499	1477	1499	0.97
7	9	0.041	2.8	8.6	0.8	1	14	1505	1518	1505	1520	0.92
8	9	1.3e-06	9.3e-05	22.7	2.1	3	23	1721	1741	1719	1741	0.96
9	9	2.6e-07	1.8e-05	24.9	0.9	1	23	1747	1769	1747	1769	0.98

Sequence Information

Coding Sequence: ATGCAGCTGATGCGATGGAGCATCACACGGCGACTCGAGAGCCGCAGTAACAAGCAGCGTCGAGACGTCAAGATCTGTCAGGCTGACTGTACTACTTCGCCTGGGTCCTGTGATATCGCCTACTCTCAGTATTCCGGGGAAGGAATCGAGTCCGGGTCAGACGGAGAAGAAAGTGCTGGAGGAGGCGTCGTAGGAGGGGTAAAAGGaagtggcggtggtggtggtgttgGTGACGGTGAAGTAACAAGGGGTCCAGTCGACGAGGCCGTAGACCTTAGACGATCTCATCATGGAGAGGAGGATGAGAGGGATCGAGAGGATTTGCCAATGgacgaggacgaagaggacgaggaaggTGTCGAAGATCCAGGGGATCAagatgaggaggaggaaggaaCGCGAAAACAGGTGATGCGACATCGTCAGGATGCGGAGAACAACAACAGCTTTGTCGAAGGTGGACCACCAAGTGGGATCTTCGGCCCAGCTGGAGCCAGTCACGTGACCCTTGAGGCCCTTCAGAATACGAAAGTCGCTGTGGCACAATTCGCAGCCACAGCACTAGCTGGGGGTGCTGATAGCGAGGCGGCCCTTCAGGATTTAGCGCTGCTTCAGAGTACCCTCTACACCCTCCAGCATCAGCAGGTCTTCCAGTTGCAATTGATAAGTCAACTGCAGCAACAGCTCTCGATAACGCATGGTCAGCCGACGGTTCCCGGAGCTCCAACTGGAACAGGGCTACCGGGTACGGGGGTGACTTCGACGACAACGGCAAGTACGACAACAAGCACTAGTCATCCAAGTACTCCGTTCGGGTGTGTCGGAGGTGCTGGTAGTGCTGTCAACAGTAGTACCAATGCTGGTATTGGAGGTGGTATTGCACATGTCGGTAGCGGTATGGGAGGTGCTGCTTCTGTCGATACTCGTGACATGTCATCGTCAACAGACAACAAGGAAGCATCATCCTCGCCAACGATTCACCCGAAGCCTCTCTCGGCCCTGACCTCGCCGCCGTCCTCCCGGCCACCGAGCCATCATCGACAATCGTCGCCGGGACTACTCCAGTCACAGAGTCAAGAACGAAGCACTCCCTCAGCAGGTGGTGCTGGTAGCGGTGGCAGCACATCTCCGTTGAGTCTACCGCTGCCGTTGTCGCTCTCGCTCCCGTCATCGGCGGCAgcagcggcggcggcggctgCCGCAGCCGCAGCAAGTCAAATATCCCTCTCCCACCAAATGCCGCCTCTCTGCTCGATAAGCTCCTCACTGGCCTCGTCGATCATCACGAACACGGACCCGCCGCCCCTCCACGAGCCAAACACCCTCGAGATGCTACAGAAACGAGCGCAGGAGGTGCTCGACAATGCGAGTCAGGGCCTCCTGGCAAACAATCTAGCCGATGAACTTGCGTTCAGGGGCGGCAAGGGCTCACGACTATCACCCTACGATTCGAAGTCCTCTGGTGGCCGCGGCGAGCCCTTCTTCAAGCACCGCTGTCGCTACTGTGGCAAGGTCTTTGGCAGCGACTCGGCTCTCCAGATTCACATCCGGTCCCATACAGGTGAGCGACCCTTTAAATGCAACGTCTGCGGAAGCCGATTCACCACCAAAGGAAACCTCAAGGTCCACTTCCAGAGGCACACGGCCAAGTTTCCACACGTTAAGATGAATCCGAATCCCGTGCCCGAGCACCTTGACAAGTACCATCCCCCCCTTCTCCAGCAGCTCGCGGCTTCCGGGCAAAGGCCCTTACCGTCcccgccaccgccaccgccgccaccaccgcccCCGCCACCGCCAGcgtcgtcctcctcctcctcgtcgtcgtcgccatCATCGTCGTCGCATCATCCGTCGTTGTGTCACCCTGGCtccgcagcagcagcagcagccgcagCCGCCGCCGCAGCGGCTCATGGTTTCCTTCCCCCTCAGCCACCGTTACCTCTTGGTCTAACCATTCCTGGAATGCCGCCCCTTTACCGATCGCCCCTCCTTAATCACAGGGAGGAACAAGAGGTTCCAGAGAATCTCAGTAAGACCACCGTCCCATCTCCTCACGCATCACCTCCTGTTTCAACGGGACTTCATCATCTCCCTTTACCTAGTTCCCTTCATCCCCACCTCCACCATCAAACAAACTCGCATCATTCCTCCTTTCACGAGCATCATCAGCTGAAACAACAGCAGCATctccatcatcatcatcacgcTCAACAACATCATCTCCATCATCACGAGCAGACTGCCACCTCGATAGCATCCTCGGCCGCGCAAAGGGACGAGATCAAACTAGAACACCAATCACCTATTCAAGACTCCTACCAACAACAATCACGACCAACGAGTCGAGAAGATTCCGAGAGGATAACACCGAAGCGAGAACCAGAGGATGCTGAGGAGCAACCCGAAGATGAAGCAGAGGAATACGAGGATAATACTCGGAGGTATCTAAACAACTCGTCACCATCCTCGACGGCTAATCCTCCGTCGCAGCCACAACCTTACGAAGATTGCAGTATGGACAGTAGTAAGATGAGTGTCCGGCTCGAGGCCGAAAATGAAATAGACGGGGACGGGGACGAGGAGATGGAAGAACAGCCAGAGAACCTCTCAGGTCGTGGTACTTCGAGTAGACTTGGCCACCAGAGTCTCGGATATCCTGGTGCCTCTCCCGCGAGCAGTAGTGCCAGTAGCAGTAGCCTCCAAACGACCTTCGCAGGAATTTTGTTTCCCACGGGGCCACCACTACCACCAGTGACTTCGTCCTCGGCCTCGACGATCCATCATCCTCAGCTGGTTCACCATGTCTCGTCCAGCGCTGGCGGCACTACTCCCACCGCACCTGGATGTGAAATGATCGTTGATCCTGCCCGTGATCCTGCCATATACTCGAGCCTACTACCACGACCAGGGAGCAACGACAATTCCTGGGAGAGTCTTATCGAAATCACGAAAACCTCAGAGACGTCAAAGCTCCAGCAGCTCGTTGACAACATCGAGCACAAGTTGACGGATCCTAACCAGTGCGTCATCTGTCATAGGGTACTCTCCTGCAAGAGTGCACTCCAGATGCACTATCGTACTCATACAGGCGAACGGCCATTCAAGTGCAAAATATGCGGCAGAGCCTTCACCACCAAAGGCAACCTAAAGACTCACATGGGAGTGCATCGAGCGAAACCACCACTGAGGGTGCTTCATCAGTGTCCGGTATGTcacaaaaaattcacaaatgcCCTGGTACTTCAGCAGCACATACGACTTCATACGGGTGAACCTACGGATCTCAGTCCGGAACAAATTCAAGCGGCTGAAGTTAACGAGTTTCCACCTGGTTATCCACATCATCCTCTGGCGTCATTTCTACCTCAGGGATTCCCGGCGCTTCATCCTGCAGGAGCTGGGTTCGCTTTGGGGTTCCCAGGTTCTCGCCAGCACATAGCTGAAAGAACTCCTCACGAGAACGACCTAGACTCAAAGGACACTCGAGAACATCTTCATCATCCGCTTCTGCCCTCCCATCATCATCTCTCGCATCAACAGAATGCTCAACATCATCTGCAACAgcatcaacaacaacaaaagtACTCAGAGGAGCGAAACTCGACCGCAGGTGATGACGAAATGGCTGAGGATCAAGACGAAGAGGATGACATTACTCGAGAGGATGATGACAAATGCGATGAACGGGAGAGGCGAAGTATGGAAGAGGCTGAAAACGATCAGGAGAGAGATGAGAACGAGGAGGAACATCAACATCATcatcaacaacaaaaacaacGGATGTCACTACCAAGTTTCTCGACGTCTTTGGCGGCCCTCGAGAATCAGGTGCGAACGATCACGACAACAGTCGCTGGTGGTAGCTCCAGGTCACCTGGACCTCACCGATATAATGGAAGTGAAAAGAGCACCAGTCCCCCGGCGATAGGAAATGGAAGCGCCGGTCTTCCGCTTGACCTGACCCCACGTTCTTCCTCGACCCCGGTGGGTGGCTCGACGCCTACCCCGACGCCGCCGTCCCCACCGACAGCAGGAGTATCCTTGACATCGCCATCCGCCTCGTCACAGAGCACAGCGCATCACGCGCATGCTTTCGGAATGTTCGCAGGCCTTCTTAGGGCGGTCTCATCGCCACCGTCGAGTCTCGGTGGTGGCGGCGCCAGCGGCATTGGCGGTAGCAGCATCAGCACTCCCAGCGTATCCGGTACAACATTAAACAGCATAGTCTCGATGAACGCTGGCAATCCAGTCGTCGGCGAAGGCGTCGATAGCGTCGTTGGTGTCAGTGGCGTCGGCGGTGTCGGTGGCAGTAGCGGCGGCGGGGGCGCACTTGCCTCTCTAACGACGTCGGCCGTTCTCGCTGCCACTTCTACCTACAATCCCCTCGGCCTGGCTGTCGGAGGGCCAGCAGTCCGCGGTAACACAACATGCAATATCTGTTACAAGACGTTCGCTTGTAACTCTGCCTTGGAGATTCACTACCGGAGCCACACGAAGGAGCGACCGTTCAAGTGCAGCATTTGTGACCGGGGCTTTTCCACGAAGAATGAACGCGAACCCTGGTTGACGAATACGTGTACCTGTGTCGATCGGAGGAACTCCCTATCCAAGACTGGCACCGAGTCCACTAGCACCACTAGCACGACTAGCACCACTATCACCAACATCCCTTCGTCCGAGTCGCATGGCGGCAATCGGACGAGGCCGAAACGCAGGCGGCGACGTCCTGAGGAGAGGAAGCCCCGGGGGCGGACTGGTGGCAACGAATGGGGGCGGGGAGTGATCTCTGGCTACGCTGCTCTCCACCTGCCCCCGATGCTGCCTCCCGCCCTCGGACTTCTCGCCTCGGACCACGTCTTCCTGGGAAACATGAAGCAGCACATGCTTACACACAAGATCCGGGACATGCCACCTCACCTCTTTGCCGACGCGAAACAGACGGgtcagcaacagcaacaggaTCATGAAAACTCGAGAAGTCCTATGTGTGCGGATGAGTCGAGTCTACCGCCTCCagcacctccaccaccaccaatgCCACCCTCGTCCGTAGAAGCTGTAGTAGCAGCCGCGGCGATGCCTGTCAAGAGATCACCACCGGAGGGTGATTTACCTGCGCCGAAGAGGCCGCCCAGCATGCCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCATCTTCGGCGCTCCAGATCCATATGAGAACACATACGGGTGACAAACCGTTCCGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAATCTCAAGGTACACATGGGAACTCATATGTGGACGAacggagcgtcgcgacgaggTCGCCGAATGTCATTGGATCTACCGCCACTGCCCATCACACCAAAGGACTCGGAGTTTCTTCAACGACGACCGGATCTCTTTTATCCTTATCTACCCGCGCCGTTCCTTAATGGCGTCCAACAAAAACTGAACGAGATCTCGGTCATACAAAGTAACAATGGGCTAACATCACCACATAGCGCAAGTGCAGCCAAGTACGCTGGTCTCTTTGGATCAGTCTATGGAGGTGGCGGTATCGCTGCGGGATTCCCTGTCGATAAGCAGCCGATGGCACCGAGTAATGGCTCCCTAGGAGAATCAAAATCCTTGTCAGCAGGGTCCATGCTCTTCCGCACCCCATCTCCATCTCATTCACCCGGCACTCCGTCGTCTAACACCGGTAATCAGAATTCCGCCAGTGTACCATCTTGGGGAGGCAGCGATCCGCTGCAACACAGATTCGAGCGTGAAACTTCGTCCAGGACGGAGGAGAACGCGACGCCGCCAACGGCAAGACTGCCACCTACACCGGCACCCAGAGGAGAAGGTCTGGCCGCCTAG
Protein Sequence: MQLMRWSITRRLESRSNKQRRDVKICQADCTTSPGSCDIAYSQYSGEGIESGSDGEESAGGGVVGGVKGSGGGGGVGDGEVTRGPVDEAVDLRRSHHGEEDERDREDLPMDEDEEDEEGVEDPGDQDEEEEGTRKQVMRHRQDAENNNSFVEGGPPSGIFGPAGASHVTLEALQNTKVAVAQFAATALAGGADSEAALQDLALLQSTLYTLQHQQVFQLQLISQLQQQLSITHGQPTVPGAPTGTGLPGTGVTSTTTASTTTSTSHPSTPFGCVGGAGSAVNSSTNAGIGGGIAHVGSGMGGAASVDTRDMSSSTDNKEASSSPTIHPKPLSALTSPPSSRPPSHHRQSSPGLLQSQSQERSTPSAGGAGSGGSTSPLSLPLPLSLSLPSSAAAAAAAAAAAAASQISLSHQMPPLCSISSSLASSIITNTDPPPLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGGKGSRLSPYDSKSSGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHVKMNPNPVPEHLDKYHPPLLQQLAASGQRPLPSPPPPPPPPPPPPPPASSSSSSSSSPSSSSHHPSLCHPGSAAAAAAAAAAAAAHGFLPPQPPLPLGLTIPGMPPLYRSPLLNHREEQEVPENLSKTTVPSPHASPPVSTGLHHLPLPSSLHPHLHHQTNSHHSSFHEHHQLKQQQHLHHHHHAQQHHLHHHEQTATSIASSAAQRDEIKLEHQSPIQDSYQQQSRPTSREDSERITPKREPEDAEEQPEDEAEEYEDNTRRYLNNSSPSSTANPPSQPQPYEDCSMDSSKMSVRLEAENEIDGDGDEEMEEQPENLSGRGTSSRLGHQSLGYPGASPASSSASSSSLQTTFAGILFPTGPPLPPVTSSSASTIHHPQLVHHVSSSAGGTTPTAPGCEMIVDPARDPAIYSSLLPRPGSNDNSWESLIEITKTSETSKLQQLVDNIEHKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLSPEQIQAAEVNEFPPGYPHHPLASFLPQGFPALHPAGAGFALGFPGSRQHIAERTPHENDLDSKDTREHLHHPLLPSHHHLSHQQNAQHHLQQHQQQQKYSEERNSTAGDDEMAEDQDEEDDITREDDDKCDERERRSMEEAENDQERDENEEEHQHHHQQQKQRMSLPSFSTSLAALENQVRTITTTVAGGSSRSPGPHRYNGSEKSTSPPAIGNGSAGLPLDLTPRSSSTPVGGSTPTPTPPSPPTAGVSLTSPSASSQSTAHHAHAFGMFAGLLRAVSSPPSSLGGGGASGIGGSSISTPSVSGTTLNSIVSMNAGNPVVGEGVDSVVGVSGVGGVGGSSGGGGALASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCSICDRGFSTKNEREPWLTNTCTCVDRRNSLSKTGTESTSTTSTTSTTITNIPSSESHGGNRTRPKRRRRRPEERKPRGRTGGNEWGRGVISGYAALHLPPMLPPALGLLASDHVFLGNMKQHMLTHKIRDMPPHLFADAKQTGQQQQQDHENSRSPMCADESSLPPPAPPPPPMPPSSVEAVVAAAAMPVKRSPPEGDLPAPKRPPSMPSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPAPFLNGVQQKLNEISVIQSNNGLTSPHSASAAKYAGLFGSVYGGGGIAAGFPVDKQPMAPSNGSLGESKSLSAGSMLFRTPSPSHSPGTPSSNTGNQNSASVPSWGGSDPLQHRFERETSSRTEENATPPTARLPPTPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00298578;
90% Identity: iTF_00253834;
80% Identity: -