Pful005378.2
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- ZNF212
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000052.1:12069792-12086490[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.5 1.3e+02 4.0 0.1 6 20 12 26 7 27 0.89 2 14 0.13 11 7.4 0.3 3 20 35 52 33 54 0.92 3 14 0.86 76 4.8 0.3 1 12 206 217 206 220 0.92 4 14 4.3 3.8e+02 2.6 0.1 1 19 375 393 375 393 0.95 5 14 2.7e-05 0.0024 18.9 0.1 1 23 400 422 400 422 0.98 6 14 1.3e-05 0.0011 20.0 1.6 1 23 436 458 436 458 0.98 7 14 1.5 1.3e+02 4.0 0.7 1 10 483 492 483 504 0.75 8 14 1.9e-05 0.0017 19.4 0.6 3 23 512 532 510 532 0.96 9 14 0.0021 0.18 13.0 2.9 1 23 548 570 548 570 0.98 10 14 3.2e-06 0.00028 21.9 4.2 1 23 576 598 576 598 0.98 11 14 0.0037 0.32 12.2 3.6 1 23 604 626 604 626 0.98 12 14 2.6e-05 0.0023 19.0 0.9 1 23 632 654 632 654 0.98 13 14 0.00075 0.067 14.4 0.3 1 23 658 680 658 680 0.98 14 14 0.0002 0.018 16.2 0.1 1 23 688 711 688 711 0.96
Sequence Information
- Coding Sequence
- ATGGGAGGCCTACAGTTAGCATGTCCCCTATGTTGCGATAAATTGTTCGACTCCAAAGATGCATTACTAGAACATTTAGTTGATGTGACAAATAATTTATTTTGTCCTATTTGCAATAGCAAATGCTCATCATTGGAAGGTCTCACTGAACACTTGACTATTTATGATTGTCAGTCTGAGCAAGATGATGGCATTCAAAATGTTGTTATTTATGAACAAAGTGTGGACAACACTGATAGTTTAGAAGATTTAAAAAATTCGAATTCAAAGACTCTTTGTCCTGAACTAAGTACGTCAGATACTCAATATGTAACGGATGAAACATATGAAAGTCAAGATGAAACTGGGGAAGTCAATAAAATGTATGTTGAGCTGATAAGTAAGGAATTGTCAAAGCCTGTACTTCAAACTCAGGAGATTAAAATAATAAAGGAAGATGGGGAAAATCATTACATGATTTTGACTCAAGATGATGCCGAGTTGAACGAAGAAGATACAATAGTTACGAAACAAAACAATGATGGCACTATATCTTTGACTACAGTTAAAGATATGAAGATGGATCCGGATACACTTATAGTTTCAGAGCCTGACTTGACAGAAGAGAAAAAGATATACAGTTGCAATACATGTAAAGTATCTTTCACATCAGTGCTTGAACATATACAAAATTATCACAATGATCAGGAGGTGCTTCTTGAGAGTCCCAATAAAGAACAAATTCATTCCAATTTTCAGGAAGGTGATGAAGAATTAACGTTAAGTGATATACAAACAGCAAGGCGTGTGATTACTGATACTGGTGATATTGTTGAAGAGCCTATGATTTTTAAATCTGAAGACACTGAGATACAACAGGACACCATTGATGCTATAGTAAAACATCCTAAACTAGTTCTGGACAAACAAGGTCGGGCCTACACCAGACGTTTTGTACAAATTGATAAAGTATCAGAAACTATTACTGAAGTAGCTGAAGTTTCTGAAGTTTCTGAAGTTTCTGAAGTATCTGAAGTTTCTGAAGTATCTGAAGAGTCTCCACTAGCTATTCCTGAGAAAACTGATTACCATCAAGTAGTCGCGAAAGAGCTGCAGATGAAAACGGGCCTTACAATGAAGATGTACAACTGCATGTCGTGTAACATAACTGTGTCTGATTTGAATGAGTTCAAAGAACATCCTTGTAAAACTACAAAATATCCATGCCCAAAGTGTCCAGCAGGATATGAAAACCCGAAGTCTTTGTGTGCACATATGAAAGTACACAAGGAGAATCCAGATGGCAGCCCTGCAGTAGTCTTAAATTTTGTGTGTGAAGTGTGCTCTACTGTATTTAAGACAAACAAATCATTGAAACTACACAAACGGATGCACGATCCCATTAAATCGCGTCCAATTCAACCTCCAGTAAACGAAAACGGCAACAAAGAAGTATCCGGAAACTTATACCACTGTAACATTTGCGATAAAGTGATTCCGTACGACTATCGGACCGTGCACGAGAACTCGCACAAGTCGAACAACACGATGAACTGTGGCATTTGCAACAAGAAATTTACCTCCAACGAATTTCTGGAGATGCACATGAATATACACAATTTAGATAAAGCACCAATGAGTAAGCAAGACAAAACACTTCAATACAAATGTTTATTTTGCAATAGAAGATTTGCGAGACCACACGAGAAAGTTAAACATGAAAGAATTCATACTGGCGAAAAGCCGCACTCTTGCGAGATCTGCGGCAAGTCGTTCCGCGTGCTGTACTGCCTCACGCTACATATGCGCACGCACACCGGCGCAAGACCCTACGAGTGCGCACAGTGCGGAAAGAGGTTCAAAGCACACAGCGTGTACAGCCATCACCTGCTGACACACTCGGAAGTTCGCGCGTACAAGTGCACGTTCTGCCCCAAAGCGTTCAAGACCTCCGTGCAACTCGCCGGACATAAGAATTCGCACACCAAACCATTCTCTTGTTCACAATGCAACAGGCCGTTTGCATCTCTATATGCTGTTCGCATACACACTGAAACACACAACCGACAAAACAATCTTAAATTCTCTTGTGTAATGTGCGGAGCGAGCTACGCCCGAGCCTTCGCACTCAAAGATCACATGAAACAGGTGCACAAGAGGGATGCGGATAGTGTGGATAACTTGGTTGAGAATGGTACCGAGGAACCGGAAGAGTGGATGACTCAAGACCCTACAGTTGAGCCGGAAGGAATGCAATCTCTAAACAAGGAACTACAAGAAACTATTACCGACTTAGAGATGAGTGCCAACGAATTAATAATTTCATGA
- Protein Sequence
- MGGLQLACPLCCDKLFDSKDALLEHLVDVTNNLFCPICNSKCSSLEGLTEHLTIYDCQSEQDDGIQNVVIYEQSVDNTDSLEDLKNSNSKTLCPELSTSDTQYVTDETYESQDETGEVNKMYVELISKELSKPVLQTQEIKIIKEDGENHYMILTQDDAELNEEDTIVTKQNNDGTISLTTVKDMKMDPDTLIVSEPDLTEEKKIYSCNTCKVSFTSVLEHIQNYHNDQEVLLESPNKEQIHSNFQEGDEELTLSDIQTARRVITDTGDIVEEPMIFKSEDTEIQQDTIDAIVKHPKLVLDKQGRAYTRRFVQIDKVSETITEVAEVSEVSEVSEVSEVSEVSEESPLAIPEKTDYHQVVAKELQMKTGLTMKMYNCMSCNITVSDLNEFKEHPCKTTKYPCPKCPAGYENPKSLCAHMKVHKENPDGSPAVVLNFVCEVCSTVFKTNKSLKLHKRMHDPIKSRPIQPPVNENGNKEVSGNLYHCNICDKVIPYDYRTVHENSHKSNNTMNCGICNKKFTSNEFLEMHMNIHNLDKAPMSKQDKTLQYKCLFCNRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVLYCLTLHMRTHTGARPYECAQCGKRFKAHSVYSHHLLTHSEVRAYKCTFCPKAFKTSVQLAGHKNSHTKPFSCSQCNRPFASLYAVRIHTETHNRQNNLKFSCVMCGASYARAFALKDHMKQVHKRDADSVDNLVENGTEEPEEWMTQDPTVEPEGMQSLNKELQETITDLEMSANELIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01360932; iTF_00707216; iTF_00824088; iTF_00157442; iTF_01502342; iTF_00823296;
- 90% Identity
- -
- 80% Identity
- -