Basic Information

Insect: Arctia plantaginis
Gene Symbol: -
Assembly: None
Location: CADEBC010000561.1:11629753-11642837[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.058 3.6 8.3 0.2 6 20 12 26 7 27 0.89

2 14 5.9 3.6e+02 2.0 0.0 3 20 35 52 33 54 0.87

3 14 0.75 46 4.8 0.3 1 12 208 219 208 222 0.92

4 14 3.8 2.3e+02 2.6 0.2 1 19 344 362 344 362 0.95

5 14 4.9e-05 0.003 18.0 0.1 1 23 369 391 369 391 0.98

6 14 1.1e-05 0.00066 20.0 1.6 1 23 408 430 408 430 0.98

7 14 1.2 76 4.1 0.3 1 9 455 463 455 476 0.84

8 14 0.00017 0.011 16.2 0.5 3 23 484 504 482 504 0.96

9 14 0.0018 0.11 13.1 2.9 1 23 520 542 520 542 0.98

10 14 2.7e-06 0.00017 21.9 4.2 1 23 548 570 548 570 0.98

11 14 0.0047 0.29 11.7 5.7 1 23 576 598 576 598 0.98

12 14 1.6e-06 0.0001 22.6 0.4 1 23 604 626 604 626 0.98

13 14 0.00043 0.027 15.0 1.1 1 23 630 652 630 652 0.98

14 14 4e-05 0.0025 18.2 0.2 1 23 660 683 660 683 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.058	3.6	8.3	0.2	6	20	12	26	7	27	0.89
2	14	5.9	3.6e+02	2.0	0.0	3	20	35	52	33	54	0.87
3	14	0.75	46	4.8	0.3	1	12	208	219	208	222	0.92
4	14	3.8	2.3e+02	2.6	0.2	1	19	344	362	344	362	0.95
5	14	4.9e-05	0.003	18.0	0.1	1	23	369	391	369	391	0.98
6	14	1.1e-05	0.00066	20.0	1.6	1	23	408	430	408	430	0.98
7	14	1.2	76	4.1	0.3	1	9	455	463	455	476	0.84
8	14	0.00017	0.011	16.2	0.5	3	23	484	504	482	504	0.96
9	14	0.0018	0.11	13.1	2.9	1	23	520	542	520	542	0.98
10	14	2.7e-06	0.00017	21.9	4.2	1	23	548	570	548	570	0.98
11	14	0.0047	0.29	11.7	5.7	1	23	576	598	576	598	0.98
12	14	1.6e-06	0.0001	22.6	0.4	1	23	604	626	604	626	0.98
13	14	0.00043	0.027	15.0	1.1	1	23	630	652	630	652	0.98
14	14	4e-05	0.0025	18.2	0.2	1	23	660	683	660	683	0.96

Sequence Information

Coding Sequence: ATGGGAGGCCTACAGTTAGATTGTCCCCTATGTTGCGATAAATCTTTCGACTCTAAAGATGCATTGCTTGAGCATTTAGTTGATGttaccaataatttattttgtcctATTTGCAATAGCAAATGGTCATCATTGGAAGGTCTTACTGAACACTTGACTGTTAATGATTGTCAGTCTGAACAAAATGATGgtatacaaaatattgttatatatgaGCAAAGTATGGATAATATTGATAATTCAGAAGATATAAAAGATTCTGATGTAAAGACTCTTTCTCCTGAACTAAGTTCACCAGATACTCAATATATAACAGATGAAACATATGAAAGCCAAGATGAAACAGGTGAAGTCAACAAAATGTATGTTGAGCTGCTAGGTAAACAATTATCTAAGCCTGTACTTCAAACTCAAgagcttaaattaataaaagaagatGGGGAAAATCATTACATGATTGTAACTCAAGATGATGACGAGTTGACTGAGGACAGTGCAATTGTTACTAAACAGAACAACGATGGCACCATATCTTTGACTACAGTTAAGGATATAAAGCTGGATCCAGACACACTGATAGTTCCAGAACCTGACCTGACAGAAGATAAACAGAAAGAGATATATAGTTGCAATACATGTAAAGTATCTTTCACATCAGTGCTTGACCATATACAGAATTATCACAATGATCAGGAGGTGGTTCTTGAGGAAGGTGATGAAGACATAACATTAGGTGATAAGCAGACAGCAAGGCGTGTGATTACAGACACTGGGGACATTGTTGAAGAgccaatgatttttaaatctgaTGATACTGAGATACAACAGGACACCAttgatGCTATTATAAAACATCCTAAATTAGTATTGGACAAACAGGGCCGTGCCTACACTAGACGCTTTGTACAAATTGATAAAGTACCTGAAACTGTCTCTGAAGAGGCACCTCCAACTGTACCTGAGAAAACTGATTATCATCAAGTGGTCACAAAACAGCTGCAAATGAAAACGGGTCTTACGGTGAAGATGTACAACTGCATGTCTTGTAACATCACTGTCTCTGATTTAAATGAGTTCAAAGATCATCCttgtaaaataacgaAGTACCCATGTCCTAAATGTCCAGCAGGATATGAAAACGCGAGGTCCTTGTGTGCACATATGAAAGTGCACAAGGAGAATCCAGGTACATCGGATGGCAGTCCTGCAGTGGTCTTACATTTTGTATGTGAAGTGTGCTCTACGGTATTTAAAACgaacaaatctttgaaactaCACAAAAGGATGCATGATCCCATCAaATCGCGTCCCATTCAGCCTCCTGTGAATCATCGCGGTAACAAAGACGTGTCTGGACATGTATACCACTGTAACATTTGCGATAAAGTGATCCCGTATGACTATCGCGCCGTACACGAGAACTCGCACAAGTCGAACAACAAGATGAACTGTGGTGTATGCAATAAGAAATTCACCTCCATGGAGTTTCTGGAGATGCATatgaatatacataatttagataaagTACCAATGAATAAACAAGATAAAACACTTccctataaatgtttattttgcaaTAGAAGATTTGCTAGACCACACGAGAAAGTTAAACACGAAAGAATTCATACCGGCGAGAAGCCGCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGTGTGCTGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGCCCATACGAGTGCGCGCACTGCGGGAAGAGGTTCAAAGCTCACAGCGTGTACAGCCACCACCTGCTGACGCACTCGGACGTGCGCGCGTACAAGTGCCCGTACTGCCCCAAAGCCTTCAAGACCTCCGTGCAGCTCGCCGGACACAAGAACTCCCACACCAAACCCTTCTCTTGTCAACATTGCAACAGGCCGTTTGCATCTCTATATGCTGTTCGCATACACACTGAAACGCACAACCGCCAAAACAACCTTAAATTTTCATGTACAATGTGTGGAGCGAGCTATGCCCGCGCCTTTGCACTCAAAGATCACATGAAACAAGTGCACAAGAAGGACTTGGATAGTGTGGACAACTTAGTCGAGAATAGTACAGAGGAAACGGAAGATTGGATGACGAGAGACACCACAACTGAGCCGGAAGGGATGCAATCGCTCAACAAGGAATTACAAGAAACTATTACCGACTTAGAAATGAGTGCCAACGAACTAATAATTCCATAA
Protein Sequence: MGGLQLDCPLCCDKSFDSKDALLEHLVDVTNNLFCPICNSKWSSLEGLTEHLTVNDCQSEQNDGIQNIVIYEQSMDNIDNSEDIKDSDVKTLSPELSSPDTQYITDETYESQDETGEVNKMYVELLGKQLSKPVLQTQELKLIKEDGENHYMIVTQDDDELTEDSAIVTKQNNDGTISLTTVKDIKLDPDTLIVPEPDLTEDKQKEIYSCNTCKVSFTSVLDHIQNYHNDQEVVLEEGDEDITLGDKQTARRVITDTGDIVEEPMIFKSDDTEIQQDTIDAIIKHPKLVLDKQGRAYTRRFVQIDKVPETVSEEAPPTVPEKTDYHQVVTKQLQMKTGLTVKMYNCMSCNITVSDLNEFKDHPCKITKYPCPKCPAGYENARSLCAHMKVHKENPGTSDGSPAVVLHFVCEVCSTVFKTNKSLKLHKRMHDPIKSRPIQPPVNHRGNKDVSGHVYHCNICDKVIPYDYRAVHENSHKSNNKMNCGVCNKKFTSMEFLEMHMNIHNLDKVPMNKQDKTLPYKCLFCNRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVLYCLTLHMRTHTGARPYECAHCGKRFKAHSVYSHHLLTHSDVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCQHCNRPFASLYAVRIHTETHNRQNNLKFSCTMCGASYARAFALKDHMKQVHKKDLDSVDNLVENSTEETEDWMTRDTTTEPEGMQSLNKELQETITDLEMSANELIIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198040;
90% Identity: iTF_00823296;
80% Identity: -