Pful015152.1
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- -
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000086.1:6110005-6123421[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2.5 2e+03 -0.4 0.8 16 27 45 56 37 66 0.84 2 20 0.018 14 6.5 2.0 18 38 232 253 228 257 0.77 3 20 0.099 80 4.1 6.1 15 40 257 279 249 282 0.75 4 20 0.00055 0.45 11.3 0.8 18 41 288 308 281 310 0.89 5 20 0.028 22 5.8 3.8 18 40 316 335 309 344 0.83 6 20 0.11 89 3.9 7.1 18 38 344 365 335 372 0.87 7 20 0.0026 2.1 9.2 1.2 18 41 372 392 366 394 0.82 8 20 0.0084 6.8 7.5 3.1 18 41 400 420 393 423 0.81 9 20 0.0018 1.4 9.7 1.0 18 41 428 448 422 450 0.85 10 20 0.41 3.3e+02 2.1 3.0 18 38 456 477 449 479 0.79 11 20 0.0007 0.57 11.0 0.8 18 41 484 504 478 506 0.84 12 20 0.011 8.9 7.1 2.0 18 38 512 533 504 537 0.89 13 20 0.0076 6.1 7.7 1.3 18 38 540 561 534 565 0.89 14 20 0.35 2.8e+02 2.3 1.9 18 41 568 588 562 590 0.76 15 20 0.23 1.8e+02 2.9 1.6 18 38 596 617 588 619 0.87 16 20 0.14 1.1e+02 3.6 7.5 17 38 623 645 613 649 0.85 17 20 0.13 1.1e+02 3.7 1.0 18 38 652 673 646 676 0.89 18 20 0.0015 1.2 10.0 4.7 15 38 677 701 669 705 0.83 19 20 0.0081 6.5 7.6 1.3 18 38 708 729 702 730 0.89 20 20 0.044 35 5.2 2.7 18 38 736 757 733 757 0.84
Sequence Information
- Coding Sequence
- ATGTATAACCTTTCGATGTGCCGTGTCTGTTTAGAAGAAGACTTTCGACTGATTTCGATTGTCGGAACTCATCTACAAGAAATGTATGAGTCTCTTGTTTTGAGGCCATTGGAAACTACAGATGGCAAGCCTATGGTAATATGCTATATATGTCGCGCAAGGCTCGAGAACTGCTATGAGTTGAGGAAGAGCTGTCTCCAGAGCGAGGAGCTGTTCACACAGATGCTGAACTCTGCTGAGTCCGAACAAGTGCAGCTACACGCAACACACAGTAAGAAGAAACTCACCATGCACAATGTCATACACTTGAGCGTGGGACATGAACTGGGGATGGATGCAGACAATTCTGGTGTGGAGGCTCTCAAGTGTGAAGTGAAAGATGAACCATATGATGGGGAAGGTGACTCTACACCGAAGGAACCTACACAAGACGCGCAGAAGAGTTCTGAAGAGTTAACCACTCGCAACATGAATGAACATGAACTCATCCAGGACACTTCTAAAGAACTTCACGAAGTTACTGCTGCATACGTAACAGATGACAATAAAGAGATACCTACAAGTATACCGCACATCAATCGTGTACAATATACGTGCGACACGTGtctgcaatgttacagttctaagtgtgagttagagagacacgttcgtttatgctctggtgtgtggaagaaagatctcttacgtgagtgcacttgtgatatatgtaagaaacaattctcactcaagagttatttatcaacacacatgcgtaaacacactggtgagaaaccatataattgtgatatatgtaagaaacaattctcacacaagagtactttatcaacacacatgcatacacacactggtgagaaaccatataattgtgatatatgtaagaaacaattctcacagaagagtaattttacaacacacatacgtacacacactggtgagaaaccatttaattgtgatatatgtaagaaacaattctcacacaagagtactttatcaacacacatgcatacacacactggtgagaaaccatttcattgtgatatatgtaagaaacaattctcacacaagagtcattttacaacacacatgcgtacacacgctagtgggaaacaatttcattgtgatatatgtaagaaacaattctcactcaagagtactttatcaacacacatgcgtacacacactggtgagaaaccatttcattgtgatatatgtaagaaacaattctcacacaagagtcgttttacaacacacatgcggacacacactggtgagaaaccatttcattgtgatatatgtaagaaacaattctcactcaagagtactttatcaacacacttgcgtacacacactggtgagaaaccatttcattgtgatatatgtaagaaacaattcttactaaagaaacaccttataacacacatgcgtacacacactggtgagaaaccatataattgtgatatatgtaagaaacaattctcacagaagagtactttatcaacacacatgcgtacacacactggtgagaaaccatataattgtgatatatgtaagaaacaattctcactaaaggcacaccttataacacacatgcgtacacacactggtgagaaaccatataattgtgatatatgtaagaaacaattctcactaaaggcacaccttataacacacatgcgtacacacactggtgagaaaccatttcattgtgatatatgtaagaaacaattcttacacaagagtattttatcaacacacatgcgtacacacactggtgagaaaccatataattgtgatatatgtaagaaacaattcttagaaaaggcacacctaactggacatatgcgtacacacactggtgagaaaccatttcattgtgatatatgtaagaaacaattctcacacaagagtcattttacaacacacatgcgtacacacactggtgagaaaccatttcattgtgatatatgtaagaaacaattcttacaaaaggcacacctaactggacatatgcgtacacacactggtgagaaaccatttcaatgtgatatatgtaagaaacaattctcacgaaaggcacacctaacaagacatatgcgtacacacactggtgagaaaccatataattgtgatatatgtaagaaacaattctcactaaaagcacaccttataacacacatgcgtacacacactggtgggaaaccatttcattgtgatatatgtaagaaacaattctcacacaagagccatttaacattgcatatgcgaacacacagcggtgagaagccgtataatgtgtaa
- Protein Sequence
- MYNLSMCRVCLEEDFRLISIVGTHLQEMYESLVLRPLETTDGKPMVICYICRARLENCYELRKSCLQSEELFTQMLNSAESEQVQLHATHSKKKLTMHNVIHLSVGHELGMDADNSGVEALKCEVKDEPYDGEGDSTPKEPTQDAQKSSEELTTRNMNEHELIQDTSKELHEVTAAYVTDDNKEIPTSIPHINRVQYTCDTCLQCYSSKCELERHVRLCSGVWKKDLLRECTCDICKKQFSLKSYLSTHMRKHTGEKPYNCDICKKQFSHKSTLSTHMHTHTGEKPYNCDICKKQFSQKSNFTTHIRTHTGEKPFNCDICKKQFSHKSTLSTHMHTHTGEKPFHCDICKKQFSHKSHFTTHMRTHASGKQFHCDICKKQFSLKSTLSTHMRTHTGEKPFHCDICKKQFSHKSRFTTHMRTHTGEKPFHCDICKKQFSLKSTLSTHLRTHTGEKPFHCDICKKQFLLKKHLITHMRTHTGEKPYNCDICKKQFSQKSTLSTHMRTHTGEKPYNCDICKKQFSLKAHLITHMRTHTGEKPYNCDICKKQFSLKAHLITHMRTHTGEKPFHCDICKKQFLHKSILSTHMRTHTGEKPYNCDICKKQFLEKAHLTGHMRTHTGEKPFHCDICKKQFSHKSHFTTHMRTHTGEKPFHCDICKKQFLQKAHLTGHMRTHTGEKPFQCDICKKQFSRKAHLTRHMRTHTGEKPYNCDICKKQFSLKAHLITHMRTHTGGKPFHCDICKKQFSHKSHLTLHMRTHSGEKPYNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01197997;
- 90% Identity
- iTF_01197997;
- 80% Identity
- iTF_01197997;