Pful023145.1
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- -
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000129.1:865501-877952[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-11 1.9e-08 34.5 0.0 4 39 147 183 144 187 0.89 2 4 3.7e-11 3.5e-08 33.7 0.3 2 39 199 236 198 240 0.92 3 4 4.5e-15 4.3e-12 46.2 0.3 2 45 254 298 253 298 0.96 4 4 3.5e-17 3.3e-14 53.0 0.0 1 42 305 347 305 349 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGCCAAGGACTGTGGCTGGTGAAAAACGAGCCACCGTCTGACGAAGAAGATAGTAATTCACAGTTCGCGCGCAATTATCTATCTAGTCAGGGCAGTGGTCTGGAAGAGTTGGCACCGCTGGCGCCAGCGGGACCTGCAGCCACGCCGGTATGTGTCAAACAGGAACGAGCCTCGCCACCGGCCACGATGCTGGAGACTCTCGAGTCAGCACCGCATTATGTTAAGAGCACGTCGTTGTTGGATCACCACCGGATTGCAATGAACTTAGAAGAAGTGCCGGACTCCACAGACTTCGTACCACTCTTAACCGTTAAAGATGAACCCACATCCGAAGGAGAACAACCTCAGCTCAGTGGAGAAGACACAAGCGATTCTTGCAGCAGACAAATGTCGCCAGCTCCACGAACCAGCCCAAAGAGTTGGACGCAACAAGATATGGAACGAGCACTGGACGCACTTCGGAAACACGAAATGAGTCTTACTAAGGCATCAGCAACTTATGGTATCCCTTCGACAACACTGTGGCAACGAGCACACCGTCTCGGTATTGACACTCCAAAGAAAGAGGGAGCCGCCAAATCTTGGAGCGAAGCTGATTTACGCGGGGCCCTTCACGCACTGAGGGCAGGTGCTATATCTGCTAATAAAGCAAGCAAGGCTTATGGTATCCCGAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGTATTCGTCTGTCGGCGCCTTTCAACGCAGCTCCGACGGCATGGCGGCGCGCAGACCTGCAGCGCGCCCTTGCCGCCATCCGCGCCGGCGCCAGCTCCGTGCAGCGCGCCGCCGCCACCTACGGCATACCCACCGGAACGCTGTACGGTAGATGTAAACGAGAAGGTATTGAGTTATCCAGATCCAATCCCACGCCGTGGTCGGAGGATGCCATGGGAGAGGCACTTGAGGCGGTTAGGATAGGGCAGATGTCGATTAACCAGGCGGCGATACATTTTAACCTGCCGTATTCGTCGCTGTACGGCAGATTCAAGAGATGCAAGTACCAGATGCAGGGCGTCCTTCAACAACAACAACAGCAGCAACAAGACGTGCAAAAAATAGAAATGGACTTTCCACAGCACGAGGCTCATCAATACCACCACCAACTGCCTCCCCCACTCGACCAAGACCCACAAACATTTGCCCATGTGACTGAATATCCCCACAACACCTACATTCACGACCAATACGGCCAATATTACCAATCTTTCACTGGTATAGCGACCAGCTGA
- Protein Sequence
- MPGQGLWLVKNEPPSDEEDSNSQFARNYLSSQGSGLEELAPLAPAGPAATPVCVKQERASPPATMLETLESAPHYVKSTSLLDHHRIAMNLEEVPDSTDFVPLLTVKDEPTSEGEQPQLSGEDTSDSCSRQMSPAPRTSPKSWTQQDMERALDALRKHEMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQRALAAIRAGASSVQRAAATYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQMQGVLQQQQQQQQDVQKIEMDFPQHEAHQYHHQLPPPLDQDPQTFAHVTEYPHNTYIHDQYGQYYQSFTGIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00823839;
- 90% Identity
- iTF_00441414;
- 80% Identity
- -