Patr115466.1
Basic Information
- Insect
- Phosphuga atrata
- Gene Symbol
- LZTR1
- Assembly
- GCA_944567605.1
- Location
- CALYMX010004085.1:35938-54734[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-08 3.7e-05 26.7 0.6 3 107 360 496 358 499 0.82 2 4 0.79 1.5e+03 2.3 0.1 77 108 498 529 494 531 0.88 3 4 4.1e-18 7.6e-15 57.9 0.0 5 97 586 679 584 693 0.85 4 4 1.1 2e+03 1.8 0.0 76 100 692 716 687 722 0.84
Sequence Information
- Coding Sequence
- ATGAGTGCCATCACGGTTTCGGAGGCAGCTTGTTCTTCATTCGATAATGCTTTGTCCCTGGAGCTGGGGCCCTTCGAGACTGTCCACCGGTGGAAGCGAATGCCCGAATGCGATGAATTTGTCGGGGCCAGGCGGAGCAAACATACAGTTGTAGCTTATAAGGAAGCTATCTACGTTTTTGGGGGAGACAACGGGAAGAGCATGTTGGACGATTTGCTGCGCTTCGACGTGAAGGAAATGTCTTGGGGAAGGGCTTTCGCGACGGGTAGTCCTCCGGCGCCCAGGTACCACCACTCCGCCGTGGTCCACAACCAGTCCATGTACGTCTTCGGCGGCTACACCGGCGACATCCACTCGAATTCGAATCTGACCAATAAGAACGACCTGTTCGAGTACCGGTTCAACTCTGGCCAATGGTCGGAGTGGAAGTTCGTGGGCAAAACGCCGGTGGCAAGGAGTGCCCACGGTGCTGCCATCTACGACAACAAGCTTTGGATCTTCGCCGGATATGACGGCAACGCGAGGTTGAACGACATGTGGACAATTTCCCTCTTGGAAAGGGAGGGAAGAAACTGGGAGGAGGTAGATCAAATTGGCGAATGTCCGCCGACTTGTTGCAATTTTCCGGTCGCTGTGGCCAGGGAGTGCATGTTCGTCTTCAGTGGACAAAGCGGTGCGAAGATCACTAACACGCTCTTCCAGTTCAGCTTTCGGGACAAGACGTGGATAAGGATCTCAACGGAGCACATTTTGCGCGGTGCTCCTCCACCTCCAGCGCGGAGGTATGGACATACTATGGTGGCCTTCGACCGGCACTTGTATGTGTTTGGCGGGGCGGCTGATAGCACGTTATCGAACGATTTGCACTGCTTCGATTTGGACTCGCAGACCTGGTCGGTGATCCTACCAGCTGCTGAGTCGTTTGTGCCCTCGGGACGGCTGTTCCATGCAGCGGCCGTTATCAATGACGCGATGTTCATCTTCGGAGGAACGGTGGACAATAACGTTAGGAGCGGCGAGATGTATCGCTTCCAGTTCAGTAGCTACCCCAAGTGCACGCTGCATGATGACTTTGGAAAGATCTTGGAGAGTCGGCAGTTCAGTGATGTGGAGTTTCTGGTGGGGGAGGAGGAAGAGAAGGTGTTGGGACATTTGGCTTTGGTGGCGGCAAGGAGTTGTTACTTGAGGAGCAAGATTAAACAAGCCAAGGAAACCAGGGACTTGCACCTGGAGGAGCTGTTTGGGACGACGAAGGTGCCCTTCACCGACATTCCTCTTCTGCAAGTGAAGCTCAAAGACGCGAACCCAGAGGCGTTCGAGATGGTCTTGAACTACATCTATATGGATTGCATAGATCCCACCAAGAAGGCCAAGAAAGGTGAGGACCCTTTCTCCAACAGGATCGTTTTGTTGATGATGGATGTATACCGTCTCTCCCTCAAGTTCGCAATGGCTCGGCTGGAACACCTCTGTGTCCAATACTTGAACGCCACAATATGTTTGAAGAACGTCTTGGTGGCCCTCCACAACGCCAACTCCCTCAAGCTGGACTTCATCAAAGAGTTCTGCCTCAAGTTCATCGTCAAAGACACAAACTACAACCAAATCGTGATGTCCACCGAGTTTGAGAACCTCGACCGCCAGCTGATGATAGAAATCATCAGAAGGAAACAGCAACCGCAGACCAAGACCCAAATCGACTTTGTCTTCGGAGGAGTCGGTTCCTCGTTAGAACAAGACATGGCTATGTTCCTGAGGACTTCTGGACTTGAGTTCTGTGATATCAATCTTCTGCTGGACGGCTCTGTTATTCCGGCTCACAAGTCCGTTCTTGCGGCCAGGTGTGGGTACTTCGAGGCCATGTTTAGGTCTTTCATGCCTGCTGATGGTACCGTTAGGATCCAAATTGGTGAGATGACTCCATCGAAGGAGTCTTTCGATTCCTTGCTGCGGTATATCTATTATGGGGATGTGAACATGCCGCCGGAGGATTCTTTGTATTTGTTCTCGGCTCCTTACTTCTACGGGTTCACGAATAACCGGCTGCAGGCGTTCTGCAAGCAGAACCTCGAGATGAACGTGTCGTTCGAGAACGTGATCCAGATCCTGGAAGCGGCGGACCGGATGCAGGCGACGGACATGAAGAAGTACGCGCTGGGCATCATCGTGCACTACTTCACCAAGGTGGCCAAGCTGCCCAAGCTGAAGCTGCTCAGCAAGGAGCTGATCCTGGACATCCTGATGGCGCTGGCCAACGACATGTCCGAGAGCAAACTGTGCCAGGACGTCTCCTCCGTCAGTTTGAGCAGTGACAATTAA
- Protein Sequence
- MSAITVSEAACSSFDNALSLELGPFETVHRWKRMPECDEFVGARRSKHTVVAYKEAIYVFGGDNGKSMLDDLLRFDVKEMSWGRAFATGSPPAPRYHHSAVVHNQSMYVFGGYTGDIHSNSNLTNKNDLFEYRFNSGQWSEWKFVGKTPVARSAHGAAIYDNKLWIFAGYDGNARLNDMWTISLLEREGRNWEEVDQIGECPPTCCNFPVAVARECMFVFSGQSGAKITNTLFQFSFRDKTWIRISTEHILRGAPPPPARRYGHTMVAFDRHLYVFGGAADSTLSNDLHCFDLDSQTWSVILPAAESFVPSGRLFHAAAVINDAMFIFGGTVDNNVRSGEMYRFQFSSYPKCTLHDDFGKILESRQFSDVEFLVGEEEEKVLGHLALVAARSCYLRSKIKQAKETRDLHLEELFGTTKVPFTDIPLLQVKLKDANPEAFEMVLNYIYMDCIDPTKKAKKGEDPFSNRIVLLMMDVYRLSLKFAMARLEHLCVQYLNATICLKNVLVALHNANSLKLDFIKEFCLKFIVKDTNYNQIVMSTEFENLDRQLMIEIIRRKQQPQTKTQIDFVFGGVGSSLEQDMAMFLRTSGLEFCDINLLLDGSVIPAHKSVLAARCGYFEAMFRSFMPADGTVRIQIGEMTPSKESFDSLLRYIYYGDVNMPPEDSLYLFSAPYFYGFTNNRLQAFCKQNLEMNVSFENVIQILEAADRMQATDMKKYALGIIVHYFTKVAKLPKLKLLSKELILDILMALANDMSESKLCQDVSSVSLSSDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01186316;
- 90% Identity
- -
- 80% Identity
- -