Basic Information

Gene Symbol
lolal
Assembly
GCA_944567605.1
Location
CALYMX010000431.1:510243-513326[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.0063 12 9.0 0.0 64 100 2 38 1 41 0.85
2 10 6.3e-20 1.2e-16 63.7 0.0 5 100 53 144 49 147 0.89
3 10 6.3e-20 1.2e-16 63.7 0.0 5 100 159 250 155 253 0.89
4 10 6.3e-20 1.2e-16 63.7 0.0 5 100 265 356 261 359 0.89
5 10 6.3e-20 1.2e-16 63.7 0.0 5 100 371 462 367 465 0.89
6 10 5.1e-19 9.5e-16 60.8 0.0 5 100 477 568 473 571 0.89
7 10 5.1e-19 9.5e-16 60.8 0.0 5 100 583 674 579 677 0.89
8 10 5.1e-19 9.5e-16 60.8 0.0 5 100 689 780 685 783 0.89
9 10 7.7e-19 1.4e-15 60.2 0.0 5 100 795 886 791 889 0.89
10 10 7.7e-19 1.4e-15 60.2 0.0 5 100 901 992 897 995 0.89

Sequence Information

Coding Sequence
ATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGATTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGATTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGATTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATACATTAATTTTATGTGCATTTAGTGAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATACATTAATTTTATGTGCATTTAGTGAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAGATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCCGCGGGAAGAAGACCGCCCCGAACAAGAGAAAAGAAAGAGGAATAAAGATTCTCCGGTAGTGAAACAAAACATCGCCTAA
Protein Sequence
MLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLINSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLINSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLINSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHTLILCAFSEYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHTLILCAFSEYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPPREEDRPEQEKRKRNKDSPVVKQNIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-