Basic Information

Gene Symbol
lolal
Assembly
GCA_944567605.1
Location
CALYMX010000431.1:504296-509890[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.012 23 8.1 0.0 64 100 2 38 1 41 0.85
2 18 1.3e-19 2.5e-16 62.7 0.0 5 100 53 144 49 147 0.89
3 18 1.3e-19 2.5e-16 62.7 0.0 5 100 159 250 155 253 0.89
4 18 1.3e-19 2.5e-16 62.7 0.0 5 100 265 356 261 359 0.89
5 18 1.3e-19 2.5e-16 62.7 0.0 5 100 371 462 367 465 0.89
6 18 1.1e-18 2e-15 59.8 0.0 5 100 477 568 473 571 0.89
7 18 1.6e-18 3e-15 59.2 0.0 5 100 583 674 579 677 0.89
8 18 1.3e-19 2.5e-16 62.7 0.0 5 100 689 780 685 783 0.89
9 18 1.3e-19 2.5e-16 62.7 0.0 5 100 795 886 791 889 0.89
10 18 1.3e-19 2.5e-16 62.7 0.0 5 100 901 992 897 995 0.89
11 18 1.1e-18 2e-15 59.8 0.0 5 100 1007 1098 1003 1101 0.89
12 18 1.1e-18 2e-15 59.8 0.0 5 100 1113 1204 1109 1207 0.89
13 18 1.1e-18 2e-15 59.8 0.0 5 100 1219 1310 1215 1313 0.89
14 18 1.6e-18 3e-15 59.2 0.0 5 100 1325 1416 1321 1419 0.89
15 18 1.1e-19 2e-16 63.0 0.0 5 100 1431 1522 1427 1525 0.89
16 18 1.6e-18 3e-15 59.2 0.0 5 100 1537 1628 1533 1631 0.89
17 18 1.6e-18 3e-15 59.2 0.0 5 100 1643 1734 1639 1737 0.89
18 18 1.1e-19 2e-16 63.0 0.0 5 100 1749 1840 1745 1843 0.89

Sequence Information

Coding Sequence
ATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGATTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATACATTAATTTTATGTGCATTTAGTGAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGATTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGATTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTAAATACTTCACAGGGCTTCTGACATTGATTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATACATTAATTTTATGTGCATTTAGTGAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTGAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATACATTAATTTTATGTGCATTTAGTGAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAAATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATACATTAATTTTATGTGCATTTAGTGAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAGATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCTATTGGCAGGTTTTCTCCACCGTCAGGAGTTATGTGACGTGGCATTGTCCTGCGGTGGAGTATTGATACAAGCGCATAAATTAATTTTATGTGCATTTAGTGAATACTTCACAGGGCTTCTGACATTGACTAATAGTCCACACCATACCATTCATTTGGAAGGTGTGGATCTTAGTATGTTGGAAGCTTTGCTGACGTATATGTATAAAGGGGATGTCGACATCGACACAGACAAAGAGGAACTGTTCAAGATAACAGGGAGGAAACTAAAGATAAAGGGCATCGAAAAATTGTTTCCGTTAGCGGTGGAAATACCTCCGCGGGAAGAAGACCGCCCCGAACAAGAGAAAAGAAAGAGACAATGA
Protein Sequence
MLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLINSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHTLILCAFSEYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLINSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLINSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSKYFTGLLTLINSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHTLILCAFSEYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSEYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHTLILCAFSEYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHTLILCAFSEYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPLLAGFLHRQELCDVALSCGGVLIQAHKLILCAFSEYFTGLLTLTNSPHHTIHLEGVDLSMLEALLTYMYKGDVDIDTDKEELFKITGRKLKIKGIEKLFPLAVEIPPREEDRPEQEKRKRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01196841;
90% Identity
iTF_01196841;
80% Identity
-