Patr052743.1
Basic Information
- Insect
- Phosphuga atrata
- Gene Symbol
- dl
- Assembly
- GCA_944567605.1
- Location
- CALYMX010000929.1:529853-535528[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.081 2.8e+03 1.0 0.4 68 121 32 99 9 114 0.73 2 2 9.4e-31 3.3e-26 95.2 0.1 1 64 416 479 416 479 0.98
Sequence Information
- Coding Sequence
- ATGCGGGAAAAAATGGTACAAGACAACCACTGGACGCCAGTACACAAACACATAAAATTGAAAAAGTCTCGATTACAAAGAATTGCAGATATACACGAGATACTCAACAAAGAAAATAATCAAGAAAACCTAATACAGGTGTTATTCAATAACTGGCCCGGAGAAACGTATGTTAAAACCGAAACCAAGAAAGAAGATATTTTCGTCCGGGCACAAAAGATCGGCGTTCAAGTGCACAGGGTACATACATCTCCCGATAATAGGAAGACACAAATACAATTTACCTGCAAGGAAGATGATAACATACAATCTTTCGAACCGCAAGTGGCAAGTAAGATAGGAGAATTTGGCAAAGCTCAGGTAATAGAAAAGACAGGAACCATCGTAATTAGAGACCTAAATCCAGATATAGAACAAGATGAACTAGAAGAAGCAGTTAAAATAATAACTGGTGAAAACGCTACCATAGAGACAAGAATAATGGGAAGCATGAACAAGAGGGGCCCTAAGCACGCTTTTATTACTTTGCCAGAAACTGCTATGTGCCGAATAGAAGAAAATTATTCACCAAGCAGATGCTTTAAGTGCCTTAGGCTTGGCCATGTGGCAGCGAAATGTCCTAACAAGGAAGATAGGGCTAAAGCATGCTTTAAATGTGGACAAAGCGATCACACAGCGAAAGGCTGCAATAACTCGCCTAGGAGTTGCGAATGTAACACACACAAGAAGTACCGCCGCGATGGATTTGGCATGCAACTACGCAACGACACACGATGTCGGTATACTATCTCCGAACCGAATAATAACACAGTACGCAAGGCAGGTTGGTTTACAGACAAATCTAGAGATGTCGCTATCAAAATAACAAGCGAAACAGTAGATATCGACGACTTAGGACTGGATAATGAAGGATTTATCTGGGTTAAGGTGTGTGGACTAGCTTACTATTCATGCTACATCTCTCCCAACTGTGAAATTAACGTGTTTGAAGATTTCCTAGGTAGACTCCAAGGTAGTATAAAGCAAGTGGGAACCAAATGTATATTAGGTGGGGACTTTAATGCTAAATCTACTATATGGGGCAATGAAGCTGGCGACAAGAGAGGTACTATTCTTCTGGACTGGATCGCAGTTGAGGTAATAGAGACAGATCCGGACTTCAAGCCACAACAGCCCCCACGTCAGCCAACGATGTACAGCCAAAACGCATCTGTAGATCCTGTGCAGGTTCGCAGGCAGGCACAGGTACGCATTGTTGAACAGCCAGCCTCAAAAGCTCTAAGATTTCGCTACGAATGCGAGGGCCGATCAGCAGGCTCCATCCCCGGAGCCAGCAGCACCGCCGAAAACAAAACCTTCCCATCAATACAAATCACTGGGTACAAAGGAAAAGCTGTCGTCGTTGTCAGCTGCGTCACAAAAGATCCCCCATACAGGTAA
- Protein Sequence
- MREKMVQDNHWTPVHKHIKLKKSRLQRIADIHEILNKENNQENLIQVLFNNWPGETYVKTETKKEDIFVRAQKIGVQVHRVHTSPDNRKTQIQFTCKEDDNIQSFEPQVASKIGEFGKAQVIEKTGTIVIRDLNPDIEQDELEEAVKIITGENATIETRIMGSMNKRGPKHAFITLPETAMCRIEENYSPSRCFKCLRLGHVAAKCPNKEDRAKACFKCGQSDHTAKGCNNSPRSCECNTHKKYRRDGFGMQLRNDTRCRYTISEPNNNTVRKAGWFTDKSRDVAIKITSETVDIDDLGLDNEGFIWVKVCGLAYYSCYISPNCEINVFEDFLGRLQGSIKQVGTKCILGGDFNAKSTIWGNEAGDKRGTILLDWIAVEVIETDPDFKPQQPPRQPTMYSQNASVDPVQVRRQAQVRIVEQPASKALRFRYECEGRSAGSIPGASSTAENKTFPSIQITGYKGKAVVVVSCVTKDPPYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -