Pvar000368.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phortica variegata
Gene Symbol
dl
Assembly
GCA_001014415.1
Location
JXPM01017921.1:26-3833[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.4e-10 1.9e-06 27.9 0.0 130 168 3 39 1 40 0.91

Sequence Information

Coding Sequence
ATGGATCAGCCATCTAGCATAGACTTAAATGTGGTACGTCTGTGTTTTCAGGCATTTATAAAGGTCGAGGGCAGATATCAGCCTCTAGATCCCGTCGTCTCGGATGCGATCTTTGAGCGAAAGGCGCACAATGAACTCACAATAACGCGTCTATGTAGTTGTGTCTCTAAAATGAAGGGGAACAGTCTAATAATTATGCTATGTGACAAAGTAACCAAAgaagacataaaaattaagttttacgAGACTAATGAAGACGGCACGATTGTTTGGTCTGACTTAGCCGAGTTCCAGCAGACGGATGTCCACAAGCAGACTGCGATCGCGTTCAAGACGCCACCCTATGCAGGACCAAATAGAAGTGGCAATGTGACGGTCCAAGTCCAGTTGTATCGACCCTCCGATGGCGCAACCAGTGAACCGAGACCCTTCGAATATCATCAGGATCCAGGTATGCGTACTTTTCCTCGTTTGCAACGTAAACTTAGGCGCAGACAGGATATGGACATATTTGAAAAGATTCTATCGCTCGATAGCGAAACGACCGCGACTAAGTACTCCTGTCCACCGATGGACTTGAATGACGATGATATCGATGAGAATACTGTTTCTTCGGATGACAGCGCTAGCAAGCCGCAAAGCTCAGGCACACTCAACGAGTTTGAGGTGCCCATTAAGGTGCCATCGCTCGATTATGTCGAGGATGGCGAATGTGGCGAGAACACGGACTATGCCGAGGGCTTGGACAACACGGATATGGAAATTGAATTGGAAGTGCCGCAACTGGTGCAAGCCGTTGCTGACGATTCCACGCAAACTTCGACGCCAATGGAAGAGATACTGCGTCGTCCGCAGCTGGATGAGCCGCGTCATTTGTCGGCGGTCGATAAGATTAACGATTGGATGCGTTCGAGCGAATTCGAGCGTACGGACAGTATGACAGTAGAGAACGGCGATACAGTCTCACTCGCTCAGACCCACACTCAGACTTCACCCACCGACTATACGCCCCAGACGATCTTCACTAATGTGAGCAGTCTGACGGCAGAGACGACAATTACAAATAACCTGGACGAAGACAAGACATTGACAGATCGGTGCGTCGAGAATACGACACAATCACGCCGGGATACATTAGAAAATGACGCACTAAAGGAGCTGCcagttggtggtgttgttgagGACGAGGGCACATCGGGTTTAGTGTTAGAAGTTGGGGATGTGGGGTCGGCGAGTGCACAGGCCTCTGTTGATATTGACGAAAACTTTGACGAGACTGCAACGTATACAAGTTTGCAAATCGCATTCAAGAACCCAATTGAAATTCCCTCGAACGGCGTTAGGCAGGTACCAGCCATCGTTGAGCACAAGCAATTGAGCTACGATGACACTACTGATGCCGAAATAGTAGTATTGACCAATCCGCCAGCGCCCAAGATTAAAGTCAACGCTGCACAAACACCAGCAACGCCGCCATCTCCtgtgttgccattgccaccgCGCACACCTTCGCCTGTTCCGGACCAAaagctgccgccgctgccccCTAAGCCACGTCACTCTCAAGACCTTAGCATTTACAGCGGCATTGGCAGCGATCACAGTCCCTCCAACTCAATCTCGATCAATCGTTCACGCAATGGCAGCCTCTCCTCATCGCGCTCGCCATCACAGATCATTATCATGCGCACGCCCGATCAGAGCCCAACCAAGCGACAACCCACGCCAAGCGCATCACCGAAAAAGCGCCAAGGCTTCTTCTCACGACTCTTCTCTCGTCGCAAAAGCAAGAGCGATCTAACTACCCAGAGTGACGCTACTGAGCCACTTAGTAACTCTAAGGCCACGACGCCAACTGGCAGCCGTGATCCAAGCGTGTCCAACTTTCCGTTAAGTGACACAAATCGCGCCTCCGTGCGTTCGGTTAAGTCGGCTATACAGCAACCCACTTCGATGGGCCTCAGTCCACAAAACAGCACAAACGCTGCCAAAAGCGGCAAACCTGTCGGTCGCAGCTCTAGCAGTGTGTCGGGCAAGCGTCCCGCCTACCTTGATGCTGATGTCATACACATACCGCTCAAGGGCGGTGACAGCGAGAACAGTCTATCTGTACAGCCGGATAACTATTCCAATGCCAGCACTTTAACCTATGGCCGTCAATTGGATCGCAAAACATTGAGCACACTCCAGCTCGCTGACATACCAATTAGCGACGGCAACATGGAACTAATTGCCATCGCCGACCGTCAGAGCATCAAGAACTTGTGCGAAGGTGCTTATGGCGTTGTACTCGATCCGAGCGTTGATCTTTCTGAGGCCGAACATTTCGCGCTCTACACTAGTAAAATGCCGGAACCGGATGGCGGTGCAGACTTGGGTGTTGATGGTGTTGGAAACCCCAACGAACCGGCAGCTGAATTTTTGAGTGCTGATGAAATCGCACGTCGTTTGGCTGAGGCCAACGGCTTACAATAG
Protein Sequence
MDQPSSIDLNVVRLCFQAFIKVEGRYQPLDPVVSDAIFERKAHNELTITRLCSCVSKMKGNSLIIMLCDKVTKEDIKIKFYETNEDGTIVWSDLAEFQQTDVHKQTAIAFKTPPYAGPNRSGNVTVQVQLYRPSDGATSEPRPFEYHQDPGMRTFPRLQRKLRRRQDMDIFEKILSLDSETTATKYSCPPMDLNDDDIDENTVSSDDSASKPQSSGTLNEFEVPIKVPSLDYVEDGECGENTDYAEGLDNTDMEIELEVPQLVQAVADDSTQTSTPMEEILRRPQLDEPRHLSAVDKINDWMRSSEFERTDSMTVENGDTVSLAQTHTQTSPTDYTPQTIFTNVSSLTAETTITNNLDEDKTLTDRCVENTTQSRRDTLENDALKELPVGGVVEDEGTSGLVLEVGDVGSASAQASVDIDENFDETATYTSLQIAFKNPIEIPSNGVRQVPAIVEHKQLSYDDTTDAEIVVLTNPPAPKIKVNAAQTPATPPSPVLPLPPRTPSPVPDQKLPPLPPKPRHSQDLSIYSGIGSDHSPSNSISINRSRNGSLSSSRSPSQIIIMRTPDQSPTKRQPTPSASPKKRQGFFSRLFSRRKSKSDLTTQSDATEPLSNSKATTPTGSRDPSVSNFPLSDTNRASVRSVKSAIQQPTSMGLSPQNSTNAAKSGKPVGRSSSSVSGKRPAYLDADVIHIPLKGGDSENSLSVQPDNYSNASTLTYGRQLDRKTLSTLQLADIPISDGNMELIAIADRQSIKNLCEGAYGVVLDPSVDLSEAEHFALYTSKMPEPDGGADLGVDGVGNPNEPAAEFLSADEIARRLAEANGLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-