Basic Information

Insect: Phortica okadai
Gene Symbol: L_1
Assembly: GCA_034638295.1
Location: CM067851.1:36950620-36956605[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.3e-06 0.00049 20.7 1.7 1 23 174 196 174 196 0.98

2 18 0.44 41 5.2 5.8 1 23 202 224 202 224 0.98

3 18 2.3e-07 2.1e-05 25.0 3.1 1 23 230 252 230 252 0.99

4 18 1.1e-05 0.00099 19.8 0.3 1 23 258 280 258 280 0.98

5 18 0.03 2.8 8.9 0.1 2 23 347 371 346 371 0.87

6 18 0.00041 0.038 14.8 0.6 2 23 400 422 399 422 0.96

7 18 0.028 2.6 9.0 0.7 1 23 528 550 528 550 0.97

8 18 0.0077 0.72 10.8 0.3 2 23 558 579 557 579 0.94

9 18 0.0006 0.055 14.3 0.5 1 23 587 611 587 611 0.93

10 18 0.19 18 6.4 1.4 2 23 647 669 646 670 0.94

11 18 0.0014 0.13 13.1 2.9 1 23 717 739 717 740 0.96

12 18 6.3 5.8e+02 1.6 1.1 1 23 907 931 907 931 0.87

13 18 0.24 23 6.1 7.0 2 23 940 962 939 962 0.94

14 18 0.041 3.8 8.5 0.1 1 23 968 990 968 990 0.92

15 18 0.015 1.4 9.9 0.1 2 23 998 1019 997 1019 0.95

16 18 0.7 65 4.6 1.6 2 23 1119 1140 1119 1140 0.94

17 18 0.0029 0.27 12.1 0.0 1 23 1150 1172 1150 1172 0.97

18 18 0.023 2.1 9.3 1.9 1 23 1179 1201 1179 1201 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.3e-06	0.00049	20.7	1.7	1	23	174	196	174	196	0.98
2	18	0.44	41	5.2	5.8	1	23	202	224	202	224	0.98
3	18	2.3e-07	2.1e-05	25.0	3.1	1	23	230	252	230	252	0.99
4	18	1.1e-05	0.00099	19.8	0.3	1	23	258	280	258	280	0.98
5	18	0.03	2.8	8.9	0.1	2	23	347	371	346	371	0.87
6	18	0.00041	0.038	14.8	0.6	2	23	400	422	399	422	0.96
7	18	0.028	2.6	9.0	0.7	1	23	528	550	528	550	0.97
8	18	0.0077	0.72	10.8	0.3	2	23	558	579	557	579	0.94
9	18	0.0006	0.055	14.3	0.5	1	23	587	611	587	611	0.93
10	18	0.19	18	6.4	1.4	2	23	647	669	646	670	0.94
11	18	0.0014	0.13	13.1	2.9	1	23	717	739	717	740	0.96
12	18	6.3	5.8e+02	1.6	1.1	1	23	907	931	907	931	0.87
13	18	0.24	23	6.1	7.0	2	23	940	962	939	962	0.94
14	18	0.041	3.8	8.5	0.1	1	23	968	990	968	990	0.92
15	18	0.015	1.4	9.9	0.1	2	23	998	1019	997	1019	0.95
16	18	0.7	65	4.6	1.6	2	23	1119	1140	1119	1140	0.94
17	18	0.0029	0.27	12.1	0.0	1	23	1150	1172	1150	1172	0.97
18	18	0.023	2.1	9.3	1.9	1	23	1179	1201	1179	1201	0.97

Sequence Information

Coding Sequence: ATGATGGCTTTGAAGATGTTATATCGTGGACCCAGTTCAAGACTTGAGAATCTCATTGAGAAAATCCAAGCCACAAAGGAGATAACAAGTAACGACATGTACTCAACGCACACTTCATCTAGTTACTCACCATCGATTTCGGATGGCACGTTGACGCCCAATTCCTTGCCACCGCATTCCTTACACTTGCCCGGTCTGCCGAGCCATGTACACGAAAGGACACAAGATGGCCAGACGTCGCCAAGTCTGGGACCAAAGGCGAACGGTAATGTCAACGCTAGCGAAGGCGCTCAACTGGAAGTTGGCACCGTTGCCGAGGCAGAGGCCAAGAAGCGACAGGCACAACGACACATGCAGCCGCATCGCCATGTTGAGCATGCCTTGAAAATGGCGCACAAGCTACGTAAAATCGATAGGGATGCAGGCACGGCTGGCGGCGCGTCTGCGTCGTCGACGGCAGCGCAGAAGTTTGATAAGTTGACAGGCGAAAGCATTAAGAGCTGCAGGCCCGACGGTTCCTATCAGTGTCAGTTCTGTGATAAATCGTTTCCGCGGCTCGGCTACTTGAAGAAGCACGAACAGAGTCATGCTGAACATCTGCCCTTCAAATGCGATTATTGTGCGCGTCTCTTCAAACACAAACGGTCACGCGATCGACACACTAAATTACATACGGGCGATCGTCGCTATCGATGTCCGCATTGCGAAGCAGCTTTCTCAAGGAGCGATCATTTGAAGATTCATATGAAGACACACGACAACCAGAAGCCCTTCCAGTGCACAATCTGCAATCGTGGCTACAACACTGCCGCCGCACTGACATCACACATGCAGAATCACAAGAAACAGGCGGCCATACTTGCTGCAGGTGGCAATCCGCAGGCTCTGAACTACAGTCCACGTTCCACAGGCTCAGCCTCAAGCAACGGCAGCCTAAATAAGCGTCGCTACGCTCTGGCCATTGCCTCGGACAGCAGCCCCAGTCGTCTGGAGTATCCTAAGCGCGTACGCAGCAATGCCGCTGCAGCGTTGCAGTTACGATGTAGCTACTGCCCAAAGTCGGTCGAATTCAGCACATTAGAGCAGTTGAATGCCCACGTTCAGAGTGCTCATGAGAAGGAATACCAACAGACGCAGCAACAGCTCATAATGGCTTCCCCTGCTCCTACTGAGGTGGCTGCGAGTGGTTTTCAGCTGTCTTGCGAATATTGCACTATGAAATTCGCGAGTATTGCGACGCTCTTTCAGCATATGCGCAGCACTCACATCGATCGCTTGACAAGTCCCAACTCATATTTTGAGCATTTCAATCGCTTGGCCACCACGGGTACCTTCAGTCCGCGTCTAGCACTAGCTGCAGGAatacagcatcagcagcaacagcaccagcagcaacaCGTTGATCACTCGTCTATAAAGCTAGAGCAGCCAAGTTTACCGAGTCCGAAAGTGATGGAGCCAACGTCAAAGGCTTCGCAGCCATCACAGGAAGAGGAACCAACTGATTTGAGTCAACACAATAAGCGTCGTTCAGCATCACCACAAACCTCACCCGGCGCAATGCCAGAAAAGCCAGGAGTCTTTTTCTGCAATCAATGTAATGCTGGCCTACCTGACTTTGAGAGTTTTCGTAATCATCTGAAGACACACATTGTCGAGGGTTTGAATTTGGTGTGTCAACACTGTGGCATGTCACTTCAAGATCAGACAGAGTTTGAGCGTCATGTCATTGGTCATTTCTTGATCACCAACTCTGAATATAATTGCTCTGCGAGCTGCAGCAAGTCATACACCAAGCCTGACGAGTTACAGAAGCATCTTATGGACCAACATGTCGTCACCATGTTTAAGTGCGCTTTGTGTGCCGAACTTTTCGACACAAAGGTTGCAATCCAAGTGCATTTCGCATGCGCACATACCGCCGAAACCAAACTCCTACGCTGCTCGGCCTGCATGGAGGTATTTCGTTCGGAAACTGATTTCCAAATACATGTCAAAACACGTCACCATTTGGCTAATAGtctgaataacaacaacaataccggTGCTGGTGCTCTAGGACTCAACACATTACAGTGCATGTTCTGTCGAGTTGTCTGCTCCTCAGAATTGGAAATGCACTTCCATTTGGCAGCGCACGCACGTCAATTTCGTTGCCCCTCCTGTCCGGAGACGTTCCATGTAGAGTTTCTACTCGACCGACACATGCAGACTCATCACAGTGGCGCTAGCGAACATGGTAGCGCTGAGAAAGATTCCTACGAGGAGCAGCAGTCTACGCTAAGTCCCATGAATTCTCTCTACGTAAACGCGCTTTTCGGTGGTAAGCCGCCGATGCTGCCACCGATTGGGGCTCagacaaacaataacaacagcatcatCGATTATAATGTTGCCTTTGCTGCAGCACATCTACAGAAAGGACTCTTCCCACCGCCAAATGCCGCCGCAGCAAATAAATTCTACAGTCCGTTGCAAGTGGATACGGCCAGCGCTATGAAACAGCACCCAGCACTCATGTATGGGCTAAGTCAGCGCTACTTCGACACAAATCGTGCACTTATGGACATGTATGCCGCTCAGCAGGAGAAAAACTACTTTGTGAGTCCCAAggcgcaacagcaacaacagcagcaacaggcgGTTGCCATTACGCCGCAGCCTGACAATCGTGGCAATGCCAGGGATGAGCTGAACAATACGGTGGCGTTACCCGGATTCAGTTGTGGCATGTGTGAACGCAATGATTTCCGTACTGAGTCAGAAGTGCACTCTCATCGCAAGATCGTGCACAATATGAAGACGGGCGTCAGTCTACGTTGCGCCTATTGTTGCGGCAACTTCAAGTCACGTAGCGAGTTGGAACACCATATGAAGACCTGTCACAACTCCACCGGCAAGCACAAGTGTCTCATTTGCGATGAAGTCTTTCCCTCGCCGGCTATTCTTGCCGAGCACAAACTTCAGCACTCCAAGGTGGGCCAGTCCGGCAAGTGTTCGCACTGTGGCAAGCCACTGGCCGATGTTGCTGCCTTCAAAGAACATCTGGCTGAACacggcaataataataacgagTCCCAAGTGCCAGTGCAGTGCATTTGCTGTCGTCAAACGTTGCATTCGGACTTCGAAATCAGTTTGCATGCTAAGTTTCACACCAAATCTGGCAGCAGCAATCTCCAAGAGGCTGTCTGCGCGCTCTGTCTTGAGCCCCTGGGCAACGGCAACACCGTCGATGGTCCAGCAAAGGTTTGCGAGAAATGCTGCCGCAAACATAATCTTAATGCGCGTCCACGCAAACGCAGCACAGAACTCTACGAACGCCCCTCAGTAGAGGTATCCTACATAGAGAATCGTTGCAATCTCTGTAAGATGATACTACCACACGCACACAAGCTGCAGGAGCATTTGGTCGAGCACACATTCGCCGGCACCGAGGAGCGCGGCTACAATTGCTACATCTGCTCAGCGGTGTTCACGGCGCCCGCTGGTCTGCTCAATCACATGAACGAACATGGGCCAAATGCGCGTCCCTACGATTGCAATCTCTGCACGGAAAAGTATTACTTCCGTGCCGAGCTCGATCATCATTTGCGTGAACATGAGTTGCGTCCACCACCGCCCCGACCAAAAGAGGAGCGTCCAACAACGCCGCAACCAACAGCGCCACCGCGAACAACAACTATGGCCTCAACGCCACCAACAACGGTCAAACAAGAGTTATATGAGTCTGAAGCAGCGGAGGCGGCGAAAGAGCAAGAGGCAACAAGCGGTAACGGTGCCGACGACGATGAATATATTGAGGTGGAGCAGGTGCCGGAGCTAAGAACAGAGGAGACCGCCTCAGCTGCACATGGCAGCAACTCGCCTTTGGCTTAG
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITSNDMYSTHTSSSYSPSISDGTLTPNSLPPHSLHLPGLPSHVHERTQDGQTSPSLGPKANGNVNASEGAQLEVGTVAEAEAKKRQAQRHMQPHRHVEHALKMAHKLRKIDRDAGTAGGASASSTAAQKFDKLTGESIKSCRPDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPQALNYSPRSTGSASSNGSLNKRRYALAIASDSSPSRLEYPKRVRSNAAAALQLRCSYCPKSVEFSTLEQLNAHVQSAHEKEYQQTQQQLIMASPAPTEVAASGFQLSCEYCTMKFASIATLFQHMRSTHIDRLTSPNSYFEHFNRLATTGTFSPRLALAAGIQHQQQQHQQQHVDHSSIKLEQPSLPSPKVMEPTSKASQPSQEEEPTDLSQHNKRRSASPQTSPGAMPEKPGVFFCNQCNAGLPDFESFRNHLKTHIVEGLNLVCQHCGMSLQDQTEFERHVIGHFLITNSEYNCSASCSKSYTKPDELQKHLMDQHVVTMFKCALCAELFDTKVAIQVHFACAHTAETKLLRCSACMEVFRSETDFQIHVKTRHHLANSLNNNNNTGAGALGLNTLQCMFCRVVCSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHSGASEHGSAEKDSYEEQQSTLSPMNSLYVNALFGGKPPMLPPIGAQTNNNNSIIDYNVAFAAAHLQKGLFPPPNAAAANKFYSPLQVDTASAMKQHPALMYGLSQRYFDTNRALMDMYAAQQEKNYFVSPKAQQQQQQQQAVAITPQPDNRGNARDELNNTVALPGFSCGMCERNDFRTESEVHSHRKIVHNMKTGVSLRCAYCCGNFKSRSELEHHMKTCHNSTGKHKCLICDEVFPSPAILAEHKLQHSKVGQSGKCSHCGKPLADVAAFKEHLAEHGNNNNESQVPVQCICCRQTLHSDFEISLHAKFHTKSGSSNLQEAVCALCLEPLGNGNTVDGPAKVCEKCCRKHNLNARPRKRSTELYERPSVEVSYIENRCNLCKMILPHAHKLQEHLVEHTFAGTEERGYNCYICSAVFTAPAGLLNHMNEHGPNARPYDCNLCTEKYYFRAELDHHLREHELRPPPPRPKEERPTTPQPTAPPRTTTMASTPPTTVKQELYESEAAEAAKEQEATSGNGADDDEYIEVEQVPELRTEETASAAHGSNSPLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01196170;
90% Identity: iTF_01196170;
80% Identity: -