Basic Information

Insect: Phortica okadai
Gene Symbol: -
Assembly: GCA_034638295.1
Location: CM067849.1:43449575-43454317[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0017 0.16 12.8 0.7 1 23 244 266 244 266 0.97

2 27 0.0029 0.27 12.1 0.5 1 21 272 292 272 293 0.94

3 27 0.37 35 5.5 0.1 2 23 304 325 303 325 0.96

4 27 0.00024 0.023 15.5 0.3 1 23 398 421 398 421 0.93

5 27 0.21 20 6.3 0.3 1 22 428 449 428 449 0.94

6 27 7.3 6.8e+02 1.4 0.4 1 20 458 477 458 479 0.92

7 27 0.016 1.5 9.8 0.3 1 23 513 535 513 535 0.95

8 27 0.0017 0.16 12.9 1.5 1 23 618 641 618 641 0.96

9 27 0.037 3.4 8.7 0.7 1 21 650 670 650 671 0.93

10 27 0.00013 0.012 16.4 0.3 2 23 718 739 717 739 0.97

11 27 4.5e-05 0.0042 17.8 0.9 1 23 746 768 746 768 0.98

12 27 2.1 1.9e+02 3.1 3.9 2 23 797 818 796 818 0.96

13 27 0.04 3.7 8.5 2.9 1 23 906 929 906 929 0.96

14 27 0.0004 0.037 14.8 1.1 1 22 936 957 936 957 0.98

15 27 0.0075 0.7 10.8 1.5 1 23 966 988 966 988 0.98

16 27 2.9e-05 0.0027 18.4 4.0 1 23 1001 1023 1001 1023 0.98

17 27 0.00011 0.011 16.5 0.8 3 23 1032 1052 1030 1052 0.97

18 27 0.035 3.2 8.7 0.1 3 21 1080 1098 1079 1099 0.95

19 27 0.0012 0.11 13.3 4.5 1 23 1143 1166 1143 1166 0.96

20 27 0.88 82 4.3 0.5 2 22 1174 1194 1173 1194 0.94

21 27 0.042 3.9 8.5 0.7 1 23 1203 1225 1203 1226 0.95

22 27 0.0031 0.29 12.0 6.0 1 23 1248 1271 1248 1271 0.98

23 27 5.4e-06 0.0005 20.7 0.2 2 23 1309 1330 1308 1330 0.95

24 27 0.0052 0.49 11.3 3.3 1 23 1336 1358 1336 1358 0.99

25 27 2.7e-07 2.5e-05 24.8 3.7 1 23 1364 1386 1364 1386 0.99

26 27 1.9e-07 1.7e-05 25.3 2.4 1 23 1392 1414 1392 1414 0.99

27 27 0.001 0.096 13.5 0.1 1 22 1420 1441 1420 1444 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0017	0.16	12.8	0.7	1	23	244	266	244	266	0.97
2	27	0.0029	0.27	12.1	0.5	1	21	272	292	272	293	0.94
3	27	0.37	35	5.5	0.1	2	23	304	325	303	325	0.96
4	27	0.00024	0.023	15.5	0.3	1	23	398	421	398	421	0.93
5	27	0.21	20	6.3	0.3	1	22	428	449	428	449	0.94
6	27	7.3	6.8e+02	1.4	0.4	1	20	458	477	458	479	0.92
7	27	0.016	1.5	9.8	0.3	1	23	513	535	513	535	0.95
8	27	0.0017	0.16	12.9	1.5	1	23	618	641	618	641	0.96
9	27	0.037	3.4	8.7	0.7	1	21	650	670	650	671	0.93
10	27	0.00013	0.012	16.4	0.3	2	23	718	739	717	739	0.97
11	27	4.5e-05	0.0042	17.8	0.9	1	23	746	768	746	768	0.98
12	27	2.1	1.9e+02	3.1	3.9	2	23	797	818	796	818	0.96
13	27	0.04	3.7	8.5	2.9	1	23	906	929	906	929	0.96
14	27	0.0004	0.037	14.8	1.1	1	22	936	957	936	957	0.98
15	27	0.0075	0.7	10.8	1.5	1	23	966	988	966	988	0.98
16	27	2.9e-05	0.0027	18.4	4.0	1	23	1001	1023	1001	1023	0.98
17	27	0.00011	0.011	16.5	0.8	3	23	1032	1052	1030	1052	0.97
18	27	0.035	3.2	8.7	0.1	3	21	1080	1098	1079	1099	0.95
19	27	0.0012	0.11	13.3	4.5	1	23	1143	1166	1143	1166	0.96
20	27	0.88	82	4.3	0.5	2	22	1174	1194	1173	1194	0.94
21	27	0.042	3.9	8.5	0.7	1	23	1203	1225	1203	1226	0.95
22	27	0.0031	0.29	12.0	6.0	1	23	1248	1271	1248	1271	0.98
23	27	5.4e-06	0.0005	20.7	0.2	2	23	1309	1330	1308	1330	0.95
24	27	0.0052	0.49	11.3	3.3	1	23	1336	1358	1336	1358	0.99
25	27	2.7e-07	2.5e-05	24.8	3.7	1	23	1364	1386	1364	1386	0.99
26	27	1.9e-07	1.7e-05	25.3	2.4	1	23	1392	1414	1392	1414	0.99
27	27	0.001	0.096	13.5	0.1	1	22	1420	1441	1420	1444	0.90

Sequence Information

Coding Sequence: atgcatTCCAATAAAATTGAGAGTTCTGCAAAGTGCAGAACCTGTGAGAAGACCAGTGAACTTTATTTTAAGTTGACTACACGCAATGAAAAGCATCCCGAAAAAACTTTATCCGATATGCTTTTGGAGTTGGCAAAAATTGATGTTACTTCGGACAACGTTGAGACTCTGCCACAGCAGTTATGTATCACTTGCACTCAGCGGCTGAAAAACGCCTACGACTTTGTATTTCAGGCACAGCAAATTAATCAAAGGTTGCTCGAAAGTGTTTGTGAAGTTGGAAATAAAGGAGATATTGATTGTCTATTAGAAGCGCCAATTGATATAACATCACATGAttttatacaaattaaaatggaAGTGGAGGCCAGCGAAGAAGCACCTATATTTGCAGGAACGGATCATTCGTTGGAAACGAAAATTGCTGAAAATGCAATTCCAAAGGACGAGAGTGTAGGCGACGAAAGCGATGACCAGTGGCGAAATAGTGATCCAACAAATGAAGAATTCAACGATGATTTGCATAGGAGCAGCTTAAGCAGTGACGACAGTGATGAACAAGAGGAACCAGTTCGACGGTTACGTAGCTCAAGGATTATGTCAGCCAAGcgtattgtaaaaaagaaaactaacgAGGAAGATAGTGCTAGTGACAATGAGTATTTACCAACAAAGCGTCGACGTGGCCGTCCTCGCAGTTCTAAACGACATTCCAACGGTCAGGGTCGCTTCGTGTGTGATGTGTGTGGTAAGACTTTTGCCTGGCACAAGGATGTGCAGCGGCATGCAAAGAGTCACACTTCAGAAGTCATGTTCATCTGTGATTTTTGTGGCAAGGGATTTCAACGTAAAGATAAATACGTCGATCACTTGCAGCGTCTCTACTCTGCAAATCGTTTTAAATTGCTGGAATGTCGTCTTTGTGCTAATACCTTTGATACAATTCAGGATTTGGTGGAACATCTGAGTACGCATAAGGATGTAAGCACATTGGATGCTTTAAACATGGACAACGTCGTCATAAAAGAATTCTACGCAAGTGGTGAtttagatattgaaaaaattaaagaggcCATTTGTGCAGATATATCGGCTTTATCTTACAAAAAGTATTGCTTATTATTAAATGAATATGGCTATGAAATGAGTATTGATGATTCGGATGAAGATATTCCGAACGGTGATGTTAAATATGTTTGTGAATTATGTGGTGAAAGTTTCACGCGAAAATATCAGACACTAGCTCatgcacaagaaaaacacaagAATGATGCGATGCCCTATCGGTGCAATGTTTGTAAACTATTCTTCATCTCAGGGCAATTGATCGAGcaacatacacgcacacagtgTCGTAATAgagacaaaaaatataagtgTCTTCGATGTCCGGGTAAATTTATGTGGGCTGAAAATTTGGAGCAACACAGATGTGCAAATAGTGTAAGGAAATTTGAACGATCTGATCAGGAAAAAGAGGATATGGAAGAGGATAACTTTTCGCATAGTAAATTAGTTAGCACGTGTAAGCCATTGTTCGATTGTGGCTTGTGTATGCAAAGTTTTGACCGTTTAAAACAATTGCGTGCTCATGTCATGTTGCATCAGGACGGTAAAACAGAAGTAGATTACATAAACGGCAACTTCTTCAAACTATTTTTCCCGGAGGGTGTTGATGGACGCGAGGCAGAACTGAGCACACAAATCGCTGCAGATTTTGCAACACAAGACTTTGCACGTTATTATGCTGCACTATCCGAGAGGGGAGATGAATTGGACTTATATGATTCCGAGACAACGGTCGACGAAGAACATGAGAAATCCGATtctagccaacaacaaaaaccaacgtATATTTGTGGCATATGTGGAGAGACTTGCGGACGTCGTACGCTCTTGTTGCATCATCAGGAGTCACAGCATGCTGAACAAGCGCTACAGTTGCCTTTCCCTTGCGAAAAGTGCGGTAAACAATATGTATGCGCTGAGTTGTTGAAACAACATCAACTGCGAGACTGTTTAAATCGACACAAGACGATACAATGCGATAAGTGTGATGCCCGTTTCGTTTGGCCGGCAAATTGTTCTGCGCACTGTAATATTAAGCATACAAACGCGGACAATGCCGAAAATAAATTGGCAAGGAAATTACAGTGTGATCAGTGTGACAAGGTGTTTATATGGCCGAAAGATTTGACACGGCATAAACGAGTTCATTTGCCTGACACAGATCGTTATGAGTGTCCGTATTGTGAGCGTAAGTTTTTGCGCAAGGATAATATGCAATCGCACATTAAGGTGCACAGCGAGGAGGCAAAAAGATCGAAACCTGTCAAAGTGAAGACAGTTGACGCGCATCTTTGTAAACCACACGGCTGTAAGCGTATAGAATGTATGATTTGTCATACCAAACATCGAAAAATTTCTGACTTGCGTACGCATCTCAGCACGCATCAATATACAGTATCATTTGCAGCAGCAACGGGTGATGACAACGCTATTGAGTCTATTTCACAGGCACTTTATCCAGAGGAAGAATCGCCGCTTATGGAAGAGCAGCTGATAAAACGCATCATGTCCGACATTAAAGCGAAACAGTTTGAACGTTTTTATTCGATAACAAATGAAGCTGGCTATGAGCTGAGCTTGGAGAGTTCAGAAACAGAAAGTGATTCCGAACCGGAAGCGGATAATTCTTTAAGCAAGTCTGGTAAATACAATTGTGAACTGTGCGCATTTAATTTTCAACGCAAATATCAACTGTACGCACATCAGCATGTGTATCATATCTGGAAAGAGGCGTCCTACACTTGTGCACATTGTAAAGCGCGATTCATCAGCGACTCACTATTGGAGCATCACATGCGTACGCTGTGCCGGAACACACAGAAACGTTTTATGTGCCGCAAGTGTCCACAACGTTTTCGCTGGAAGGAGAATTTCCGAGCACACGGCAATACACACTGTGACACCGTCGATGTGAAACAGGTCAATACAAATTTTGAGTGCCACGAGTGCAACCGAAGCTTCCAAATGCAAAAGGACTTGACCCGACACATGTTCATGCATTCACGCGAGTCGGCCATTTTTGGTTGTCAGTGGTGTCCTCGAAAATTCTATCGACGCGGTAATCTGACACAGCACTTGGAGCGTCATGGCATTGCGCCGCATGAGTTGGCCTACGCTGAGACACTAATCAATGTACACAAATACGCCAATGGAAAAAAGGTGATTTTGTGCAAAGTGTGCAATATAAAATTCGAAAGAATAGCAGAGCTACGTGATCATCTACAAAATGATTTGGCAACACATCACAGTTACGAATCCATGTTGAATTATTCGATAACAAATCAATTGGGCTTTGAGCTGCATCTGGAAGACTCCGAAACCGATGATGAGGCAAAAGTTGAGGGTGTGCCTGCATCCTATACATGTGAGTTATGCCAATTGGTGTGTCGACGTAAACATGAGCTCTTTCGACATCAGCAGGCCATGCACAAGCTGGAGAAAATCGAGTTGAAGTGCACACATTGTGTTTTCAAAAGTGTATCGGCTGACTTGCTAGCTTATCATAAGCGGACACAATGTGAAAACGTAGAAAAAAAGTACAGTTGTACGGAATGTAATCTCAAATTTATGTGGGAGGATAATCTAGCGCAACACGTACAACTCCATCATACAGATAGCGCTGGCGCACCAACACTAAAAGCTGAATTAGCACAGAATGAGGCAAAGCCGATCTTTCAATGTCCGCACTGCACATGCAAATATAATCGCAAGGATCGTCTCACCGCACACGTCAAGAAGATGCATGGCGTGAATGGTGGCAAAGACGCCATGGCCAACACAGCCGGCACATCGCGTAAAAGTACTGTTGAAGTCTCAGCCGAACAGAAACTGAAAAAGGCGGATGACAAACGTTTTCTGTGTGCGTTTTGCGGCAAAGCTGTGAGCTCTTCTTCAAATCTCATTATTCATATGCGTCGTCATACTGGTGAAAAACCATTTAAGTGTGACTTTTGTGAAATGGCTTTTGCTCGCTCCTCGGACATGCAATGCCACAGGCGTACGCATACCGGCGAACGTCCATACAAGTGCACTGTGTGCGATAAAGCCTTCTCACGCTCCTATAAACTGCATCAGCATATGCGCATACACAATGGCGAACGGCCGTACAAGTGTACGTACTGTGAGAAGAGTTTCACACAGTCTAACGATCTGACATTGCATATACGACGTCATACAGGTGAACGTCCTTATGTGTGCGGCATTTGTGGCGAGCGTTTCATACAAGGCACAGCACTGAAGAATCATCGAATTATGCGCGGCCACTTCGAAGAAGTTGATGCGCCGCCCACCAGGCGTACAATACTGGAACAGTTTAGAGTTagttaa
Protein Sequence: MHSNKIESSAKCRTCEKTSELYFKLTTRNEKHPEKTLSDMLLELAKIDVTSDNVETLPQQLCITCTQRLKNAYDFVFQAQQINQRLLESVCEVGNKGDIDCLLEAPIDITSHDFIQIKMEVEASEEAPIFAGTDHSLETKIAENAIPKDESVGDESDDQWRNSDPTNEEFNDDLHRSSLSSDDSDEQEEPVRRLRSSRIMSAKRIVKKKTNEEDSASDNEYLPTKRRRGRPRSSKRHSNGQGRFVCDVCGKTFAWHKDVQRHAKSHTSEVMFICDFCGKGFQRKDKYVDHLQRLYSANRFKLLECRLCANTFDTIQDLVEHLSTHKDVSTLDALNMDNVVIKEFYASGDLDIEKIKEAICADISALSYKKYCLLLNEYGYEMSIDDSDEDIPNGDVKYVCELCGESFTRKYQTLAHAQEKHKNDAMPYRCNVCKLFFISGQLIEQHTRTQCRNRDKKYKCLRCPGKFMWAENLEQHRCANSVRKFERSDQEKEDMEEDNFSHSKLVSTCKPLFDCGLCMQSFDRLKQLRAHVMLHQDGKTEVDYINGNFFKLFFPEGVDGREAELSTQIAADFATQDFARYYAALSERGDELDLYDSETTVDEEHEKSDSSQQQKPTYICGICGETCGRRTLLLHHQESQHAEQALQLPFPCEKCGKQYVCAELLKQHQLRDCLNRHKTIQCDKCDARFVWPANCSAHCNIKHTNADNAENKLARKLQCDQCDKVFIWPKDLTRHKRVHLPDTDRYECPYCERKFLRKDNMQSHIKVHSEEAKRSKPVKVKTVDAHLCKPHGCKRIECMICHTKHRKISDLRTHLSTHQYTVSFAAATGDDNAIESISQALYPEEESPLMEEQLIKRIMSDIKAKQFERFYSITNEAGYELSLESSETESDSEPEADNSLSKSGKYNCELCAFNFQRKYQLYAHQHVYHIWKEASYTCAHCKARFISDSLLEHHMRTLCRNTQKRFMCRKCPQRFRWKENFRAHGNTHCDTVDVKQVNTNFECHECNRSFQMQKDLTRHMFMHSRESAIFGCQWCPRKFYRRGNLTQHLERHGIAPHELAYAETLINVHKYANGKKVILCKVCNIKFERIAELRDHLQNDLATHHSYESMLNYSITNQLGFELHLEDSETDDEAKVEGVPASYTCELCQLVCRRKHELFRHQQAMHKLEKIELKCTHCVFKSVSADLLAYHKRTQCENVEKKYSCTECNLKFMWEDNLAQHVQLHHTDSAGAPTLKAELAQNEAKPIFQCPHCTCKYNRKDRLTAHVKKMHGVNGGKDAMANTAGTSRKSTVEVSAEQKLKKADDKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDFCEMAFARSSDMQCHRRTHTGERPYKCTVCDKAFSRSYKLHQHMRIHNGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYVCGICGERFIQGTALKNHRIMRGHFEEVDAPPTRRTILEQFRVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01196138;
90% Identity: iTF_01196138;
80% Identity: -