Poka000485.2
Basic Information
- Insect
- Phortica okadai
- Gene Symbol
- Lztr1
- Assembly
- GCA_034638295.1
- Location
- CM067848.1:6331838-6335239[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.6e-06 0.0021 18.6 0.0 2 54 589 640 588 654 0.79 2 4 3e-08 7.1e-06 26.5 0.0 50 107 669 733 662 736 0.84 3 4 0.16 37 4.9 0.2 77 109 735 767 731 768 0.90 4 4 8.9e-19 2.1e-16 60.4 0.0 8 104 827 925 821 931 0.85
Sequence Information
- Coding Sequence
- ATGCTAAGATCCATACTCGGTTCGGAGGCGAATGATTCGAACGACGACGTTGCGGCGGCTGGTGGaggtggcggtggtggtgtcGGCGGCAGTGCAAGTGGCAGCAGCAACGGTAGTACGCCAGCAGGAGCAGCGGAAACGGCTTCAGCATCCATATTCTGTCCTGCATGTGTAGTGGCTGGCAATAGTAGCGGCAGTAACATTGGGTCCAGCACAATTAGCTTTAACGTTAGCGGTAACGGCgccagcagcggcggcggtggtggtggtggcagcGTTGGCAGTGGCGGCAGTGGTGGTGACGGCACCAGTGCCAGTATAAACAGCAGCTCCTGCTGTAGCGTTGGTATTGTCAGTGCCAGTTGCAGTAGTGGCAGTGTAAGCGGCGGCAGCTATACATCTGCTTGTGTTAGCAACAGTAGTGGTGGcagcggtggtggtggtggaggCGTAGGCGGTGGTGGAGGAGGTACTGTTGTTGACGCAGTAACAGCAGCTGTATCAAAAGCATACAAACCCGGCCGTAAGTTACGCAAGTGTGCATCATCGTGCTCGGCAGTAACGGCGCCGCCACAACGGAGCGGCTGTAAAATGGCCAGCGCTCATTCGAATTCGAGCTCAATGCGTTGCggcagcagccgcagcagtGGCAGCGCTGGCGGTCATTCAAGTGGCGCCAACAGTCTGCTCTACGATGGCAACTGCAAGGCAGTCTCGCCGGGCAGCTACAGCTGCAACGCATTGAACGTGGACTTTAGTACGTATACGGCGACGCACCAATGGACCAAAATGCTTGAATGTGCTGAATTTGTGGGTGCCAAACGGAGCAAGCATACGGTGGTTTCATACAAGGATGCCATGTTCGTTTTTGGCGGCGACAATGGCAAGAACATGTTAAATGATTTGATACGTTTCGGCGTCAAGGATAAGTCATGGGGACGTGCTTGTGCCACGGGTACGCCACCCGCTCCCCGCTATCATCACTCGGCGGTGGTCTTCGGCAGCTCGATGTTCATCTTTGGCGGCTACAATGGCGACATACACTCAAATTTGAatctaacaaataaaaatgatctATTTGAGTATAAATTTTTGAGCGCCATGTGGGTTGAGTGGAAATTTTCGGGCCGGATGCCTGTGCCACGTTCGGCACACGGCGCTGCCGTCTATGATAACAAAATGTGGATTTATGCGGGCTACGATGGCAATGCACGTCTCAATGATATGTGGACGTTGAGTCTGACTGGCGAGAGTCATCAATGGGAGGAAGTCGATCAGAAGGGCGAACGTCCGCcgacttgttgtaattttccGGTTGCTGTTGCCCGTGACTGTATGTACGTGTTCTCTGGACAGAGTGGCTTACAGAtaacaaattcactttttgaatttcacttcaaaacgaaaacTTGGCGTCGCATTTCCAATGAGCATGTATTGCGTGGCGCTGCTTCGTCGCCGCCATCACGTCGTTATGGTCATACAATGGTGCATCATGATCGTTTCTTGTATGTGTTTGGCGGTTCGGCGGACTCAACACTGCCAAATGATTTGCATTGTTATGATTTAGACTCACAGGTTTGGTCGGTTATAACACCCGAACCGAATTCGGATGTGCCGTCCGGCCGTGTCTTCCATGCGTCGGCTGTAATCGGTGATGCCATGTACATTTTTGGTGGCACAGTCGATAATAGTGTACGACGCGGCGATACATATCGCTTTCAATTCTCAAGCTATCCAAAATGTACGCTGCGCGATGATTTTGGTAAATTCTATTTAGAGAAACAATTCTGCGATATACAATTTATTGTCGGCTTCGAGGAGATTAAAATCTTAGCGCATATTGCATTTGTCGCTGCGCGTTCAAAGTATTTGCGTAATAAGATTTTATCGGCACGCGAGGCACGACATCAACAAATCGAAGATGTTTATGGCGTGGGTGCTGTTGATGCGCAGGCGCTCAACACGGGCATCGTTTGTGGTGCATTAGGCGGTGACCGTGCGCCCATGCTGGAAGTTCGTTTGCCGCATGCATCGCCCGAGGCATTCGAAATCATACTCAATTACATTTACACCGATCGCATAGATCTTAAAGAATCATATAACAAAAACATCATTATACTCATTACCGATATCTATCAATTGGCGGGTCTATTTGCAATGCCACGTTTGGCGCATGGCTGCATACAATATCTCGACTTTAAGATCAACAAACAGAATGTGCTCGAGGCGCTCTACAATGCCGACAAGAATAACATTAAAATCATCAAAGATCATTGCATGCAATTCATAATCAAAGATGAGAATTACGGTGAAGTTGTTATGTCGAATGAGTTTAGCGACTTGGAGAAACCATTATTGGTCGAGATCATACGTAAGCGTCTCAATCCAAGTAAGCTTGTCTTGGACATTAACTATGAGACAAACGTTGGCACAACATTGGAAAGTGATATGGCCGTCTTTCTTGAAACGAATGGCAAAGATTTTTGCGATATTAATCTTATACTTGAGGATCATGTGATATTAGCGCATAAATCGGTGCTCTCAGCACGTTGTACCTACTTCCAAGGCATGTTTCGCTCTTTCATGCCACCGGATAATACCGTTCATATACAAATTGGCGAAATTTCACCCTCGTTGGAGGCCTTCCAATCGCTATTACGTTATATATACTATGGTGAAACAAAAATGCCGCCACAAGATGCTTTATATTTGTTTCAGGCGCCATGCTTCTATGGACTCGCCAATAATCGTTTGCATGCATTTTGCAAATATTCATTGGAACATAATATAACATATGAGAATGTACTGCAGACACTTGAGGCATCGGACATAACAAAAATCTATGATATCAAAGAGTATGCGCTCAAATTGATTGTCAAGGATTTTGTCCGTGTTGCGGGTCTGCCAAAAATCGCTGGCCTGTCGCGTGAACTGCTGCTCGAGATCATACGCGCGCTGGCGGATTCGCAAGGCGAGTTTCTCACGCGCATTAACATTAATACAGATATCTGA
- Protein Sequence
- MLRSILGSEANDSNDDVAAAGGGGGGGVGGSASGSSNGSTPAGAAETASASIFCPACVVAGNSSGSNIGSSTISFNVSGNGASSGGGGGGGSVGSGGSGGDGTSASINSSSCCSVGIVSASCSSGSVSGGSYTSACVSNSSGGSGGGGGGVGGGGGGTVVDAVTAAVSKAYKPGRKLRKCASSCSAVTAPPQRSGCKMASAHSNSSSMRCGSSRSSGSAGGHSSGANSLLYDGNCKAVSPGSYSCNALNVDFSTYTATHQWTKMLECAEFVGAKRSKHTVVSYKDAMFVFGGDNGKNMLNDLIRFGVKDKSWGRACATGTPPAPRYHHSAVVFGSSMFIFGGYNGDIHSNLNLTNKNDLFEYKFLSAMWVEWKFSGRMPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLSLTGESHQWEEVDQKGERPPTCCNFPVAVARDCMYVFSGQSGLQITNSLFEFHFKTKTWRRISNEHVLRGAASSPPSRRYGHTMVHHDRFLYVFGGSADSTLPNDLHCYDLDSQVWSVITPEPNSDVPSGRVFHASAVIGDAMYIFGGTVDNSVRRGDTYRFQFSSYPKCTLRDDFGKFYLEKQFCDIQFIVGFEEIKILAHIAFVAARSKYLRNKILSAREARHQQIEDVYGVGAVDAQALNTGIVCGALGGDRAPMLEVRLPHASPEAFEIILNYIYTDRIDLKESYNKNIIILITDIYQLAGLFAMPRLAHGCIQYLDFKINKQNVLEALYNADKNNIKIIKDHCMQFIIKDENYGEVVMSNEFSDLEKPLLVEIIRKRLNPSKLVLDINYETNVGTTLESDMAVFLETNGKDFCDINLILEDHVILAHKSVLSARCTYFQGMFRSFMPPDNTVHIQIGEISPSLEAFQSLLRYIYYGETKMPPQDALYLFQAPCFYGLANNRLHAFCKYSLEHNITYENVLQTLEASDITKIYDIKEYALKLIVKDFVRVAGLPKIAGLSRELLLEIIRALADSQGEFLTRININTDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890189; iTF_01196050; iTF_00530321; iTF_00251411;
- 90% Identity
- iTF_01196050;
- 80% Identity
- -