Poka007829.1
Basic Information
- Insect
- Phortica okadai
- Gene Symbol
- dmd-4
- Assembly
- GCA_034638295.1
- Location
- CM067849.1:37140260-37147200[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-25 6.8e-22 77.4 9.3 1 47 36 82 36 82 0.98 2 2 0.23 1.1e+03 -0.0 0.2 23 32 326 335 316 339 0.77
Sequence Information
- Coding Sequence
- atggCGGACAGCAACGAAAGCGCTGCAGTGAAGAAATCGCGCGGTCACAATTCATTAAGCAAACCGTTAAAATCCTCGGTCTCAGTGCAACCGCGTATCCTAAATCGCGTGCCGAAATGTGCGCGTTGCCGCAATCATGGCATTATTTCCGAGCTTCGGGGCCACAAGAAACTCTGCACGTACAAAAACTGCAAATGTGCCAAGTGCGTCCTTATCTTTGAGCGTCAACGGATTATGGCCGCACAGGTCGCCCTGAAGCGTCAACAGGCGGTAGAGGATGCGATTGCACTGCGTTTGGTCTCCACCAAGACGGGCAGGCAAATCGACGCGCTGCCGCAGGGCAACATTTTCGGCTTGACCGTCACGGAGCCAAGTCAGGCGGATGTGTTGGAATGTGAACGTAAAGACGTGGTGCACCAGGACCAAGAGCAGGACTCATATAAGCCAGAGCAAACAGCACAGGACTTGAGTAGAAGCAAAGGcgtaaagcaacaaaatcgaCCGGAACAGTCGATCATAGCAACAACAGTGACAACGTCCGCTGCAGCCACGCCCACAACAATCTCACAGAACGCGATCGATATGTTGGCTCAGTTATTTCCACATCGTAAACGCTCAGTTTTGGAATTGGTGCTTAAACGTTGCGATCTTGACCTGATACGCGCAATTGAGAATATTACGCCGCCCGCTGCAACACCCCCCCAGTCGACGCAACCATCATCGTCGGCAGAGCCAGACAAAAGGGAGCAATTCGAGACATTACCATCGCCTGTACTTCCGGAGAGAAGCGCATTCCGGCCCGTTGTTGGCTTGGACAAGTTTTATAGCAAATCAACAACGCTTGCTCTTAAATCAGCTTTCCCAGCGGCAACATCGGCACAATTGAGCAGCGCTGCGACCATATGCGCTTATCCCAAATGGATCGTGCCACTCTCATTTCCGGTGACCATGAGCCATCTCTCGAATCTGGCGCCACGCTGCACACTGCCGAACTGTACTTGCATGGAGAGCTAtcaatacaattaa
- Protein Sequence
- MADSNESAAVKKSRGHNSLSKPLKSSVSVQPRILNRVPKCARCRNHGIISELRGHKKLCTYKNCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIALRLVSTKTGRQIDALPQGNIFGLTVTEPSQADVLECERKDVVHQDQEQDSYKPEQTAQDLSRSKGVKQQNRPEQSIIATTVTTSAAATPTTISQNAIDMLAQLFPHRKRSVLELVLKRCDLDLIRAIENITPPAATPPQSTQPSSSAEPDKREQFETLPSPVLPERSAFRPVVGLDKFYSKSTTLALKSAFPAATSAQLSSAATICAYPKWIVPLSFPVTMSHLSNLAPRCTLPNCTCMESYQYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -