Basic Information

Insect: Phormia regina
Gene Symbol: zfh1
Assembly: GCA_001735585.1
Location: MINJ01185517.1:1045-6393[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00015 0.015 16.7 0.7 1 23 198 220 198 220 0.95

2 15 0.048 5.1 8.7 1.2 3 23 228 248 226 248 0.95

3 15 0.00016 0.016 16.6 0.3 1 23 407 429 407 429 0.98

4 15 0.0018 0.18 13.3 0.4 1 23 435 457 435 457 0.98

5 15 0.0012 0.12 13.9 4.8 1 21 489 509 489 511 0.93

6 15 0.013 1.3 10.6 0.3 1 23 531 553 531 553 0.94

7 15 0.019 2 10.0 0.4 1 23 559 582 559 582 0.97

8 15 0.39 41 5.9 0.4 5 19 593 607 590 608 0.91

9 15 0.00024 0.025 16.0 5.6 1 23 617 639 617 639 0.97

10 15 0.053 5.5 8.6 1.7 2 23 645 666 644 666 0.97

11 15 7.4e-05 0.0078 17.6 0.2 1 23 675 697 675 697 0.98

12 15 0.007 0.73 11.4 0.2 3 23 705 725 703 725 0.97

13 15 8.4e-05 0.0088 17.4 0.5 1 23 731 753 731 754 0.95

14 15 0.018 1.9 10.1 0.1 1 23 764 786 764 786 0.97

15 15 0.11 12 7.6 0.0 1 20 1375 1394 1375 1397 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00015	0.015	16.7	0.7	1	23	198	220	198	220	0.95
2	15	0.048	5.1	8.7	1.2	3	23	228	248	226	248	0.95
3	15	0.00016	0.016	16.6	0.3	1	23	407	429	407	429	0.98
4	15	0.0018	0.18	13.3	0.4	1	23	435	457	435	457	0.98
5	15	0.0012	0.12	13.9	4.8	1	21	489	509	489	511	0.93
6	15	0.013	1.3	10.6	0.3	1	23	531	553	531	553	0.94
7	15	0.019	2	10.0	0.4	1	23	559	582	559	582	0.97
8	15	0.39	41	5.9	0.4	5	19	593	607	590	608	0.91
9	15	0.00024	0.025	16.0	5.6	1	23	617	639	617	639	0.97
10	15	0.053	5.5	8.6	1.7	2	23	645	666	644	666	0.97
11	15	7.4e-05	0.0078	17.6	0.2	1	23	675	697	675	697	0.98
12	15	0.007	0.73	11.4	0.2	3	23	705	725	703	725	0.97
13	15	8.4e-05	0.0088	17.4	0.5	1	23	731	753	731	754	0.95
14	15	0.018	1.9	10.1	0.1	1	23	764	786	764	786	0.97
15	15	0.11	12	7.6	0.0	1	20	1375	1394	1375	1397	0.93

Sequence Information

Coding Sequence: atggaTAATCATGGATATGGTGGTATACAGTGGATACAACACCACTCAACTAATCACTCCTCCCATGCCGGAGATATGAAAACTGCTGGTCAGTTAATAATTGATCCTCAGCCACCACGTGAAGAGGATCTTATGGCCAGTGCTAATTCTTCATCGGACTTTATGGCTACAGAAGACGAAACCGATTCTGCAACAATAGCTCAAATTGCTGCagaaaatcttatatttatGGCTCGCGATGGTCAAATGGTAACAGAAATTATAACAAATGCAACTACCGACACAAATGGAACTATGGTTGTGACCGCCAGCGATGGTGAACAAATTGACTGCGATACGATTATGGAACAAGCTGCCTTAATACAACAACATGAAGATGCTGGTGGTGGAGTATATAGTGTGGATCATTTTACCGAAAATACACCCCAAATGGTAACTGAAGAGGTCATCACCGATGATTGGGTGCAACATCAGGGAGAAGAaagAGTTGAAATACCTGCCGAACAAATTATTGGCTCCAGCTCTCAAGTGTTGCTGGACATTGAAGTACCCCTGCCAACCGTACAAGATGAATACACTGCCCTTAGACCCTATCCCTGCGACTTTTGTAGTCGACGCTTTCGTAAAAAAGCCAGTCTTATGAATCATATGGTGGCTCATCAAACGGATCGGCcacatttatgtaaattatgtgGTGCAAGATTTCTAAGAAGACAAGATcttatcaatcatttaaaaggGCATGCAGAAGAGCCAACAGAACCACAAATGGATGATAGTGATTTCATACATTTTGTTACTGATACCAATAATTCACCTCAGCGTACGTCCAATGATCATTATTATGAACAGGATTGGAGTGTACCAGAAGATTCGGTAACTATACCAACAAAATCTAAaattataatggaaaataacgtaataacaacaacatcgaCTACAGATCTTTCAACAAATACACAAACTACAACAGCACCACCTAGAGGTCGTGTAAGCCGTCTTAAACCTAAGGAAGATACTTCCTACGTGGTTGAAGTTGCTAATAATTGTCCCTCAGGCGAAATGGTTATTTCATCGGCTTATAGTATTGTAGAATGTGATACTTTATCTGCCAATACAGCAGCTGTTAAACTGTCCCAGGATAATAATACACCCGCTCTAGTAGAAAATAATGGACAAAATGTTATGCATTATCCCATAATAGATGATAACAAACCATTTGTTTGTCAACAATGTGGTCTAGCCTTTTCAAGAGAGAAAGCCATGTTAGCACATACCaagactCATCGTAATGATTCTCCTTTCGAGTGCCCTCAATGTAATGAATTATTTTGGGATCAAAATAGTTTGCAAGATCATCAAAAAACTCATCAATTTGAGGAAAGTAATTCTGAATATGATCCTAACGAAGGCGAAGATGAAACACAAACAGAATCCGAGTCCGAACAACAGATGTATGGTGAATTTTATTGCAGTGAATGTGGTATGTCGTTTCATCGTCAGGATCTCTTGAAAAGACATGCCAAATGTCACGCCAAAGATAATAATGAAACAACAACGGAGCAAACTAATGTGGAGAGTAGAGATCAACATTGTTGTAATACCTGCGGTGAAACATTTGCCGAAGCTTTAGATCTGTTAGCACATGCAGAAATTCATGCACGTTACCCGCCCTTTAAatgtGTCTTATGCGGTGAATCGTTCTTCGAGGAGCCAACCATTAAAAAACATCTTCAATCTCAGCATCCCAATGAAATCACCGAAAATTCTTGTATACTTTGTGGCAAAGAGTGCCGCGATCGTAAAGCTTTAATGAAACATGCATGGGACCATTCTCGAGAAAAATGTCATTCTTGTTCAAAATGCGGTAAAAATTTCCACAACAAAGCCCGTCTTAAACGTCATATGGCCTCACATCGTGATAAATCCGTACAGTGTGATGTATGCCATGAAGAGTTTCCCGATGGACGCACTTTGTCAAATCATCGACATTCTCACAGTGCCACATCGGCGGGAAAACTATTTCCTTGTTTAGAATGTGGTAAAACATTTGGTTCCCGTAGTTCTCAACAAATTCATGTACGCATACATACCGGCGAGAGGCCATATGGTTGTAGATTTTGTTGGAAAGCATTTGCTGATGGTGGTACCCTACGGAAACATGAACGTATACATACGGGAGAGAAACCTTATGCATGTTCCGTGTGTCCGCGTGCCTTTAATCAACGTGTAGTTTTAAGAGAACATATACGTTCACATCATTCAGGTTTGGATGCCAAGAGGGGTACCTATTATTGTACAGTTTGTAGTGCTGAACTATCATCATCGGGAGATTTAATACAACATCTAATACAGCATAGTGATATGAATACAGCTATGCAAAGGCAGCCGGTGACTGGCCCCCGAAAATATAAACGTCGCCGTAAATTGAAACCTCATGAATTAGAGCGCCTTAAACGTGAAGTTACCAATAATGGTGGTACTGGAAGTGATATAGATTTATCCGACTTTGACATCGATAATGTTGACGATTTGCTAGCAATGACCACAGACAGCAATACTGCCACTGAAACTGTAACAAGTGTTCAAGATCCAAAAACCAGCTCCCTAACAGGAAAGTCAACAAAACGAAGAAATATATCCTCAACAATGAACACTGAAAgcaataatcataataaaaataaatcaacacCTAAAAAAGGCAATAAATCATCTCAACTTTTAGAAGATCAAGAAGATTTTGATTTAGATGTGGGAATGGACGATGATTCGGTTAAGAAACAACGTTTTAACTCTACAAGTAGTGACAAAATTTGGCCAACAAAACAGACTGAAGACACATACAAATCGTTGTTGTCAAATTTAGAAACAACTTTACAAAGTATAGATACTTTGGTCGTGGGACCGtcaacaaaaactgaaaataatttaatggagACACAGGCACGTCAAACGAAacgtaaaattaaacaagagtCTACCTCTACAGCCCAAAGAACACAACAAGTTCAATTATCGAGGAATGATAAAGAATCTGTTTCCACAGCTAATACCAAAGGTCGTAAAAATAAAACCATGGCCTCCAAACAAACCAAAGGACCACAAATGATACATACAGAAAAAACATTCATAACAACGGACAATGGTAGTTCCACTACTGGTGGAAGTGGAACAggtaaaaagaaatcaaaatctATAATAACCCGTACACAAACGTCAAATATAGATTTACTGCCTAAAACTTCAACAATAGTGGATGATTATGATATTATATCGCCCGCCCTACAACCACCTAAACAAATTAGCTCTAGTCCTTTACACATAAAACAAGAACAAGAAAATCATAACAACTATAACCACcatcatcagcagcaacaacaacaacaacagcatcatttaatgaaaaatcctCCCAATTCTAATCACAACACTTCAGCTCGTACACAAACAACTACCCGCCACACAAACGCCAATGATCTCTATGATGCCCACCTTTTGCTAGAGGCTTCATGTTTGCGTAACGATCTTGATGAATTTCTTAGATCTCCCTCAAAATCGGATAAATGTAGACAGCGTTTTACTAGTGAATCTTCTACACAATTTCTGGCTGAACAATCTGAAGAGGAACaacatttgattaaaattgaaCCCACATCGCCCGACTTAAGGGAAATTGTTAATGGTGCTAGTTCTGTAAATACAGCTGCAGCACAAGCTGATCTCGTGGAATTGGAAGTTTCCTCATCCAGCAAAAGTCGTAGAACCAATAAATCCTCTAGATCCCAAAGAGCTGCAAATTCTAATcgtaaatatttagaatttactGGAGATTTAAACAACGCAGAAGCCAACAAAAGGCCCCCGTCAAATTTATTACATCATACAAAATCCTCAAACTCTGCACGCACTGAACCAGCGAAATCTATGCCACATACATCTAGCACAACAGCCTCATATTTAGATTATAATATAGTTGATACCTTTAATACGGTAACAAGTTCctcaacaaataataataattcatttgcTTCTATTTCGGCAGTGGTTTCAGCAGCCGATGCTTCTGCTGCGGCACAACAAAACTCCTCATCAGCTGCATCTGTGCGCAAACCTCAACGTTATTTTGAATGTGAAATGTGTAGCGCTTTATTTTCAGATCGTGCTCAACTATTGGATCATGTGcccatacatatataa
Protein Sequence: MDNHGYGGIQWIQHHSTNHSSHAGDMKTAGQLIIDPQPPREEDLMASANSSSDFMATEDETDSATIAQIAAENLIFMARDGQMVTEIITNATTDTNGTMVVTASDGEQIDCDTIMEQAALIQQHEDAGGGVYSVDHFTENTPQMVTEEVITDDWVQHQGEERVEIPAEQIIGSSSQVLLDIEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHMVAHQTDRPHLCKLCGARFLRRQDLINHLKGHAEEPTEPQMDDSDFIHFVTDTNNSPQRTSNDHYYEQDWSVPEDSVTIPTKSKIIMENNVITTTSTTDLSTNTQTTTAPPRGRVSRLKPKEDTSYVVEVANNCPSGEMVISSAYSIVECDTLSANTAAVKLSQDNNTPALVENNGQNVMHYPIIDDNKPFVCQQCGLAFSREKAMLAHTKTHRNDSPFECPQCNELFWDQNSLQDHQKTHQFEESNSEYDPNEGEDETQTESESEQQMYGEFYCSECGMSFHRQDLLKRHAKCHAKDNNETTTEQTNVESRDQHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGESFFEEPTIKKHLQSQHPNEITENSCILCGKECRDRKALMKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVQCDVCHEEFPDGRTLSNHRHSHSATSAGKLFPCLECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGLDAKRGTYYCTVCSAELSSSGDLIQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHELERLKREVTNNGGTGSDIDLSDFDIDNVDDLLAMTTDSNTATETVTSVQDPKTSSLTGKSTKRRNISSTMNTESNNHNKNKSTPKKGNKSSQLLEDQEDFDLDVGMDDDSVKKQRFNSTSSDKIWPTKQTEDTYKSLLSNLETTLQSIDTLVVGPSTKTENNLMETQARQTKRKIKQESTSTAQRTQQVQLSRNDKESVSTANTKGRKNKTMASKQTKGPQMIHTEKTFITTDNGSSTTGGSGTGKKKSKSIITRTQTSNIDLLPKTSTIVDDYDIISPALQPPKQISSSPLHIKQEQENHNNYNHHHQQQQQQQQHHLMKNPPNSNHNTSARTQTTTRHTNANDLYDAHLLLEASCLRNDLDEFLRSPSKSDKCRQRFTSESSTQFLAEQSEEEQHLIKIEPTSPDLREIVNGASSVNTAAAQADLVELEVSSSSKSRRTNKSSRSQRAANSNRKYLEFTGDLNNAEANKRPPSNLLHHTKSSNSARTEPAKSMPHTSSTTASYLDYNIVDTFNTVTSSSTNNNNSFASISAVVSAADASAAAQQNSSSAASVRKPQRYFECEMCSALFSDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00259964;
90% Identity: iTF_01261207; iTF_01259397;
80% Identity: -