Psen013184.1
Basic Information
- Insect
- Phoebis sennae
- Gene Symbol
- dmd-4
- Assembly
- GCA_001586405.1
- Location
- LQNK01000628.1:751793-756255[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-25 1.8e-21 75.8 10.1 1 47 8 54 8 54 0.98 2 2 0.79 3.8e+03 -2.0 5.6 2 11 286 295 285 296 0.89
Sequence Information
- Coding Sequence
- ATGATGAATTCTGGGAGAGCAAGAGTGCCAAAGTGCGCCAGATGTCGCAATCATGGACTAATATCCAGTTTGCGGGGTCACAAAAAGGCTTGTGCTTATCGAAACTGCCAGTGTCCTAAGTGTGGTCTGATCAAAGAACGTCAAAGGATAATGGCTGCTCAGGTAGCATTGAAAAGACAGCAAGCCGCAGAAGATAAGATAGCTCTCCACTTAGCCTCAGTAGAAAGTGGGACGTCTTTGGAAGCCTTGCCGCCAGGTCGGATATATGGCATGAGGGTGACAGGACCGTGTCAAAGTCCGGGGCCTGAACCTGATTCAGCAGCAGGAGACCAAACACCAATCCACATCGACAGCGAAACAAGCGATTCTCTTCCCGATTGCTGCACATCCCCTGATTCCGCCGCTAGCAGATCTGCGATCCGACCATGTGGCTCCTCGAATGACGACTGCACAGATCCAAATCCTGTTAGCACCGCAGGCTTAGAAATGCTGAGAAAACTGTTTCCGGGCAAAAAGCGATCCGTTTTGGAATTGGTCCTTAGGAGATGTAACCACGATCTCCTACGTGCTGTTGAACACTGCAATGCAGTTCAGGATTCTAGAGAGAAATCTTCACCAAAGAGTGTATCGAACGGATTGAACTATGAAGTATCGCTATCTAATTCTGAAGAACCGTCAAGATGGTCGGCTTTCAGACCAGTTGGTCCTCGAGCACCGCTAATGTCTGCATTAGTAATGGGGCGTGTGTGCGGATCTGAGTGGCTGGTACCTCTGCCCGCTCTCCCCACATTGTCGGCCCCTCTACTGCTTCCTCTGCAGCATCCCCATGCGCCGCCACCGCCTTGTAACCCATGCACTCCTGATTGCCGTCAATGTAATAGTCATCACTAA
- Protein Sequence
- MMNSGRARVPKCARCRNHGLISSLRGHKKACAYRNCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTSLEALPPGRIYGMRVTGPCQSPGPEPDSAAGDQTPIHIDSETSDSLPDCCTSPDSAASRSAIRPCGSSNDDCTDPNPVSTAGLEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHCNAVQDSREKSSPKSVSNGLNYEVSLSNSEEPSRWSAFRPVGPRAPLMSALVMGRVCGSEWLVPLPALPTLSAPLLLPLQHPHAPPPPCNPCTPDCRQCNSHH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01503021;
- 90% Identity
- iTF_01562047;
- 80% Identity
- -