Psen014807.1
Basic Information
- Insect
- Phoebis sennae
- Gene Symbol
- Mblk-1
- Assembly
- GCA_001586405.1
- Location
- LQNK01003341.1:436412-438630[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-15 1e-11 44.4 0.0 1 40 69 109 69 113 0.92 2 2 4.4e-19 5.2e-16 58.2 0.0 1 43 272 315 272 317 0.95
Sequence Information
- Coding Sequence
- ATGCAAGATGAAACCGAAGACTATCGATTTGTCGTGGACGATTCTAAACCGTATAATCGAGCTCCAGCGCTCAGTTTTGATGAGAGCGCAATCGGAAATAAAAGACGAATGGAAAAAGATAAAGATGCATTCTTAGTAGACCGTTATCGGGTGGACAAATTAAAACGCTCCGCGCTCGAGGGCACGAGCACGCGGCGCAACTACACCGAGGACGAGCTGCAGTCCGCGCTGCGAGACATCCAGTCCGGCCGCCTCGGCACGCGCCGCGCCGCCGCCGTGTACGGCATCCCGCGCTCCACGCTGCGCAACAAGGTCACCAAGCACGGCCTCGCCGCCGAAGCGCAGGAGTCCGAGGACAGCGACCAGGAGAAACCCGAGACGCCCTCCTCCGTCATCCTCAAAATACCCTCGTTCCCACCGCCGGACGATAAAAGCTCCTCGCCGGCCACGGTCACCCCCGTGACCCCGATCACCCCGCTGCTGCCTCCGCAGCCCTCTCTCAACCCTCCCTCGCAGCTGCTCCTCCCGCCCTCCGTGTTCGCGGACCCGCCTGCCTCTCAGCACCTCCTGACGTCGATAAGCGACGTGATAGCGAAAAGCATAAGCCAAAAGTTCCAACAGCCGCTCGACAGGCCCCCGCAACTCGACCTGTCGTACATGAGAGCGCCGGACAGACACGTGTCAGTGATCAAGACGCCGCCGGACAACCAGAGGAACTACGCCGTGCCGAGCAACTCGAAAGCGACGAACAACGGGCAGCCCGCCACCGGAGGCAAGGGCACGCGGCCCAAGCGCGGGAAGTACCGCAACTACGACAGGGACAGCCTCGTCGAGGCGGTGAAGGCCGTCCAACGCGGCGAGATGTCCGTGCACCGGGCCGGCTCCTACTACGGGGTGCCGCACTCGACCCTAGAATACAAAGTGAAGGAGCGGCATCTGATGCGGCCGCGGAAGCGAGAGCCCAAGCCGCAGCAGGACACGAAGCCGCAGCCGCCGAAGCCGCCGCTCAAGCCGCCGACGAAGCCGTTCACGAACGGGCTCAACGGGCCCGAGGCCGGCTACCCGCCGAGCTACCCGTTCTGGCCGGGCACCGGCTTCGCGCCCACCTCGGACCTGTACACGTCGCACATGATGCGGCGGCTGCGCGGGGAGGCGCCGCCGGCCAACGGCTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGAGGCACGACAGGCCCCGCTGAGCCCTGCTCCTGCAGCGGCGGACAGTGA
- Protein Sequence
- MQDETEDYRFVVDDSKPYNRAPALSFDESAIGNKRRMEKDKDAFLVDRYRVDKLKRSALEGTSTRRNYTEDELQSALRDIQSGRLGTRRAAAVYGIPRSTLRNKVTKHGLAAEAQESEDSDQEKPETPSSVILKIPSFPPPDDKSSSPATVTPVTPITPLLPPQPSLNPPSQLLLPPSVFADPPASQHLLTSISDVIAKSISQKFQQPLDRPPQLDLSYMRAPDRHVSVIKTPPDNQRNYAVPSNSKATNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDTKPQPPKPPLKPPTKPFTNGLNGPEAGYPPSYPFWPGTGFAPTSDLYTSHMMRRLRGEAPPANGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGTTGPAEPCSCSGGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00114861; iTF_00771021;
- 90% Identity
- -
- 80% Identity
- -