Acar006974.1
Basic Information
- Insect
- Anthocharis cardamines
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905404175.1
- Location
- FR989972.1:6786569-6792667[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-14 7.8e-12 45.1 0.0 1 39 72 111 72 114 0.94 2 2 1.1e-18 7.6e-16 57.9 0.0 1 43 277 320 277 322 0.95
Sequence Information
- Coding Sequence
- ATGCAAGATGAAACCAAAGACTGTCGATTTAAAGCGAAGGAATTTAAACCGTATAATCGAGGTTCAGCGTTCAATTTCGATGAGGATAAAATCGGAAATAAAAGACGAATGGAAAAAGATAAAGATGCATTCATAGCGGCCCGTTATCGGATCGACAAATTAAAACGCGCAGTGCTCGAGGGCACAAGTAATAGCACCACTCGGCGTAATTACACAGAAGATGAACTTCAGTCTGCACTGCGAGACATTCAGTCCGGTAGACTGGGCACGCGCAGGGCCGCTGCCGTCTACGGAATACCTCGCTCTACCCTCCGAAACAAAGTCAACAAACACGGCCTCGCCCCAGAAGCTCCAGAATCCGAGGACAGTGACCCTGAGAAATCAGATACACCTTCATCGGTAATTCTCAAAATTCCTTCTTTCCCTCCTCCAGACGATAAGAGTTCGTCTCCAGCTACGCCAATTACCACGCCAGTAACGCCAATCACCCCACTATTACCTCCACAATCATCTCTCAACCCTCCAACACAGCTCCTTCTTCCACCATCTGTGTTCGCAGACCCGCCTGCGTCACAACATCTCTTCACGTCGCTGAGCGATGTTATAGCTAAAAGCATAAGCCAAAAGTTCCAACAGCCTCTAGATAGGCCTCCGCAATCAGACTTGTCCTACATGAGAGCACCAGACCGACATGTTTCGGTCATCAAAACTCCACCGGACAACCAGAGAAATTATGCTATGCCGAGCAATTCTAAAGCGACGAACAACGGCCAGCCTGCGACAGGCGGGAAGGGCACGCGACCTAAACGTGGAAAATATAGAAACTACGATCGAGATAGTCTCGTCGAAGCGGTGAAAGCCGTCCAGCGAGGCGAGATGTCCGTGCACCGTGCCGGCTCCTACTACGGCGTGCCACACTCTACTCTAGAATACAAAGTCAAAGAGAGGCATTTGATGCGGCCCCGGAAAAGAGAGCCAAAACCGCCACAAGACACGAAGCCGCAGCCGCCCAAACCATCACCGAAACCTCCGACAAAGCCATTCACGAACGGCATGAACGGTCCCGAGAACCCGGGCTACCCGCCGAGCTATCCGTTCTGGCCCGGGACGGGTTTCGCGCCACCTCCCACATCGGATCTATACACTTCGCATATGATGCGAAGGTTGCGCGGGGAAGCGCCCCCGCCCGCGAACGGTTCGTTCCTAGAGGGTATAATTCGGTCGAGCTTGGAGCGGCCGGGGGCTGCTCTGTTGCAGCGGCTGACGGCGGAGCCCCGGGCGGAGGCGCCGAGCTTACTGCGCCGGTTGGCGGGCGAGCCGGACGACGAGCCGGCGGCGCGGCGGCCCCGGCTCGACTCCGACCACCAGCTCGCGGCGGAGATGCGCGAGGCGGTGCAGCGTCTCCGCGCCGACAAGATGCGGCCGCGGAACGGAACGCCGACGCCGCCGGGCCGCGCGCCGACACCGGACACGCCGACCCAAGCGCCGCCGCACACCGCCTAA
- Protein Sequence
- MQDETKDCRFKAKEFKPYNRGSAFNFDEDKIGNKRRMEKDKDAFIAARYRIDKLKRAVLEGTSNSTTRRNYTEDELQSALRDIQSGRLGTRRAAAVYGIPRSTLRNKVNKHGLAPEAPESEDSDPEKSDTPSSVILKIPSFPPPDDKSSSPATPITTPVTPITPLLPPQSSLNPPTQLLLPPSVFADPPASQHLFTSLSDVIAKSISQKFQQPLDRPPQSDLSYMRAPDRHVSVIKTPPDNQRNYAMPSNSKATNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDTKPQPPKPSPKPPTKPFTNGMNGPENPGYPPSYPFWPGTGFAPPPTSDLYTSHMMRRLRGEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRAEAPSLLRRLAGEPDDEPAARRPRLDSDHQLAAEMREAVQRLRADKMRPRNGTPTPPGRAPTPDTPTQAPPHTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01193526;
- 90% Identity
- iTF_00771021;
- 80% Identity
- -