Pmet026893.1
Basic Information
- Insect
- Phlogophora meticulosa
- Gene Symbol
- -
- Assembly
- GCA_905147745.1
- Location
- CAJHWW010000004.1:1834030-1835882[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-10 8.8e-08 32.5 0.0 1 36 18 53 18 60 0.91
Sequence Information
- Coding Sequence
- ATGTTTGTTTTTAGAATGTCCGGTTCACAATCAACCAAACGAAAAACCTGGGATGAAGAAAAAATGGCACAAGCTATAAAATTCGTCCGGGAAAAGAAAATGGGGTATTTGAAAGCGGCACAGCATTTTCAAGTGCCTAGGACAACTTTATTTCGTCTCTGCCAAAAAGATGAACAGTCTCCAGAAGTGGCAGCAGCTACTACATTAGGACGAAAAACTATCTTGGGCTCCGAACTTGAACATCAGCTAGTAGAATACATACTAATAATGGAGAGTAAGTTTCACGGTTTAACAAGAACTGATCTTCGCCGTATGGCGTTCATGCTAGCAAAGCGAAACAATTTGCAGAATCCCTTCGGTGAATCAGACAACAACAGACCTCTAAGTCCATATGATATTGTGGAGCTGTTTGGCAAATCCTATTTGAAAGTACAAACAGGCGAAATCGCAGCCAACGGGTTCAAAGTTACTGGATTGTGGCCTTTAAATAAAAATGTCTTCAGTGATGTGGACTTTATTGCTGCGCAACAAAATGCTTTAATAGACGGTTGTACAACCAATATCCCTCCGCTGGAATCAAGATCTGAAACTGGTCAAGTTCTGGTAGAAATACCTGCACCACAAACAACTGCTAATTTACAACCTGAACCTGTACCTTCGACTTCTGGGCTTAATCGCAGCAGTTTGGGTCTGGTGTCTCCGTATGCCATAAGTCCAGTGCCAGAGAAACGAATAAAAGTATCTAGCAGAGGAAGAAAAGCTGCTGTAGCAGCAGTCATAACATCTTCTCCCTACAAAACTGATTTAGAAAATAAAAATATGAAGAGACAAGAAAAAGAAAATAAACTAGTCAAGACAAAGAATAAGAAGAAAACTGCGAAGAGAAACAAACAAACGAAGAAAAATAAGGATGATAGTGAAGAAGAAGACTCTGAGGAACTAGACGTTATCCAGTTTGATGAAGGTAGTGAACATGATGAGTTGATGGACCAAGTACCTCCTGACTCTGCTGATGCAGAATGTATGTTCTGTTCAAGACTTTTTTCCATGGATAAAAGTGGAGAAAGCTGGATTAAATGCTTGATGTGTGGGCTCTGGGCACATTATGATTGTGCTGGTCCAGAGTTTGATACTTGGATCTGTGACTTTTGCAAGTAA
- Protein Sequence
- MFVFRMSGSQSTKRKTWDEEKMAQAIKFVREKKMGYLKAAQHFQVPRTTLFRLCQKDEQSPEVAAATTLGRKTILGSELEHQLVEYILIMESKFHGLTRTDLRRMAFMLAKRNNLQNPFGESDNNRPLSPYDIVELFGKSYLKVQTGEIAANGFKVTGLWPLNKNVFSDVDFIAAQQNALIDGCTTNIPPLESRSETGQVLVEIPAPQTTANLQPEPVPSTSGLNRSSLGLVSPYAISPVPEKRIKVSSRGRKAAVAAVITSSPYKTDLENKNMKRQEKENKLVKTKNKKKTAKRNKQTKKNKDDSEEEDSEELDVIQFDEGSEHDELMDQVPPDSADAECMFCSRLFSMDKSGESWIKCLMCGLWAHYDCAGPEFDTWICDFCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00332276;
- 90% Identity
- iTF_01206487; iTF_01206488; iTF_01206489; iTF_01206490; iTF_01506278; iTF_01064575; iTF_01064577; iTF_01064578; iTF_01064579; iTF_01064580; iTF_01064581; iTF_01064582; iTF_01064583; iTF_01064584; iTF_01064585; iTF_01064587; iTF_01206491; iTF_01064576;
- 80% Identity
- -