Pmet022401.1
Basic Information
- Insect
- Phlogophora meticulosa
- Gene Symbol
- lz
- Assembly
- GCA_905147745.1
- Location
- LR990535.1:6054927-6067283[-]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-17 7.6e-14 52.1 0.0 91 129 35 73 21 73 0.91
Sequence Information
- Coding Sequence
- ATGTCGTTTTCATGGCTCGGAGGACCACCGCCGCCGCCGCGGCTTTTGGCTTCAAGCCAGACGCTGGGAATACTAGTCTCTCTTTTGTTTTGCACGGAATGTTATCTCGGTAAATCGTTCTCCCTGACGATAATGCTGGCAACGTCCCCCCCTCAAGTGGCGACGTACCAGAAGGCCATCAAGGTGACGGTGGACGGTCCTCGGGAGCCGAGGTCCAAGACCAGGCACCACGGCTTCCACCCCTTCCACTTCGGTCCTCGGTTCCCACCTGATCCCTTGATGGGGTCACTACCTTTTAAGTTATCTGGTATAGCGCATCAGCTGGCAGGTTTACCAGGCGGCGAATGGGGTGCGCTGGCGCGGCATTACCCCCCTCCCTTGCTGCCCACGCCTGCGCACTTTACGCCGCATATCTTACCGCCGCACGCGCAACCTCAGCATATACCTCCACCGCCGCATGAGACTGATCTAAACTCGGACAACCCTATAACGATGCACGCGCACAGCACGACGAGTCCGGCAAACTCACGTCCTAGTTCACCGCAAGATGACGACATCTCCGTCACGGCGTCCAGCTCCCCACCACCTGATGAACGTCCAGGGGCCTTCACATCAGTTACAAGGTCAAGGAAACCGATGCAGCCACTGCCAGCACCTTCGACACTCTTCCATAGTGCACTAGCAGCACAATTATTCCTCAATTCCCCCCTACTCCCTACGCCACCTGCGTGGTTATACTCCCAACTTTACGGAGGCTACGACTGGTGGCTCAGACCGCCGCCCCTTCAAGAAGACTCCAACAATTCAAGTCCAGAAAGAGAAGAGGAAAGTTCGACAGCATCAGGGACTGGGAAGAAACGTCCTGCGTCCCCTGAATGGTCAGAGCAAGGGATGAGGACTCGCAGCAAGTCGCTGATCACGTCAGAAAGACGGCCGGTTGATGTGTGGCGTCCGTATTAG
- Protein Sequence
- MSFSWLGGPPPPPRLLASSQTLGILVSLLFCTECYLGKSFSLTIMLATSPPQVATYQKAIKVTVDGPREPRSKTRHHGFHPFHFGPRFPPDPLMGSLPFKLSGIAHQLAGLPGGEWGALARHYPPPLLPTPAHFTPHILPPHAQPQHIPPPPHETDLNSDNPITMHAHSTTSPANSRPSSPQDDDISVTASSSPPPDERPGAFTSVTRSRKPMQPLPAPSTLFHSALAAQLFLNSPLLPTPPAWLYSQLYGGYDWWLRPPPLQEDSNNSSPEREEESSTASGTGKKRPASPEWSEQGMRTRSKSLITSERRPVDVWRPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00835327;
- 90% Identity
- iTF_01084022; iTF_00785796; iTF_00888969; iTF_01246603; iTF_01361357; iTF_00274225; iTF_00027538; iTF_00301876; iTF_01534569; iTF_01025749; iTF_01029929; iTF_01119056; iTF_00039569; iTF_00040570; iTF_00622588; iTF_00745402;
- 80% Identity
- -