Basic Information

Insect: Philotrypesis tridentata
Gene Symbol: gtf3a
Assembly: GCA_018906965.1
Location: JACCIB010000003.1:7223290-7227312[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.18 28 6.5 1.0 1 15 634 648 634 656 0.78

2 15 0.51 81 5.0 1.0 2 23 689 710 688 710 0.95

3 15 0.0012 0.19 13.3 1.6 3 23 719 740 718 740 0.97

4 15 0.0012 0.19 13.2 1.4 1 23 747 770 747 770 0.97

5 15 0.0003 0.048 15.2 1.1 1 23 776 799 776 799 0.94

6 15 2.1e-07 3.3e-05 25.1 1.8 2 23 833 854 832 854 0.97

7 15 1.2e-06 0.00019 22.7 0.2 1 23 860 882 860 882 0.99

8 15 0.00056 0.089 14.3 2.9 2 23 894 916 893 916 0.95

9 15 0.018 2.8 9.6 1.5 1 23 922 945 922 945 0.94

10 15 0.017 2.7 9.6 2.5 2 23 967 989 966 989 0.93

11 15 0.0017 0.26 12.8 1.2 2 23 996 1018 995 1018 0.96

12 15 5.3e-05 0.0084 17.5 1.0 3 23 1027 1047 1025 1047 0.96

13 15 0.0015 0.23 13.0 1.2 1 23 1053 1076 1053 1076 0.96

14 15 1.2 2e+02 3.8 4.1 2 23 1083 1104 1082 1104 0.96

15 15 0.0051 0.81 11.3 2.8 1 23 1110 1132 1110 1132 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.18	28	6.5	1.0	1	15	634	648	634	656	0.78
2	15	0.51	81	5.0	1.0	2	23	689	710	688	710	0.95
3	15	0.0012	0.19	13.3	1.6	3	23	719	740	718	740	0.97
4	15	0.0012	0.19	13.2	1.4	1	23	747	770	747	770	0.97
5	15	0.0003	0.048	15.2	1.1	1	23	776	799	776	799	0.94
6	15	2.1e-07	3.3e-05	25.1	1.8	2	23	833	854	832	854	0.97
7	15	1.2e-06	0.00019	22.7	0.2	1	23	860	882	860	882	0.99
8	15	0.00056	0.089	14.3	2.9	2	23	894	916	893	916	0.95
9	15	0.018	2.8	9.6	1.5	1	23	922	945	922	945	0.94
10	15	0.017	2.7	9.6	2.5	2	23	967	989	966	989	0.93
11	15	0.0017	0.26	12.8	1.2	2	23	996	1018	995	1018	0.96
12	15	5.3e-05	0.0084	17.5	1.0	3	23	1027	1047	1025	1047	0.96
13	15	0.0015	0.23	13.0	1.2	1	23	1053	1076	1053	1076	0.96
14	15	1.2	2e+02	3.8	4.1	2	23	1083	1104	1082	1104	0.96
15	15	0.0051	0.81	11.3	2.8	1	23	1110	1132	1110	1132	0.98

Sequence Information

Coding Sequence: ATGAAGAAACTTAATTTATCTGATAATGAAGATCATAATTATACTGATGCATTAACAGAAAAGCAAGAGAATTCAAACACTGGATTCACAAGTAATTTTATATACTCCAAAGTGGCAAATTCTGGAAAAGAAAAGTATATTGGATTGAAGATAACAAATCTGAATGATTTAAAAAAAGCTATTCCTCGCCTAAAGCTGCCAACAATTCTATCATCTGCCTCATCCTCCCCATCATCAATTAAAAAAACAAGAGCTGTATCTTTAGAAATTCAACAGAAATTGCATAGATACTGTCGTACCTGTGCTGGTCTGAAAGTTCCACTAGTTGATATATTCAGTGAAAAAGGAGCTCAGATGCGATTAGCACAGCAAATACGACACTTAGAAGAAATTAATGAATTTGATAGTTTATCTACCCAAATGTGTATGGATTGTATTTGTGATTTGAGAATGAGTTACAAATTTTTCATGCAAATCAAAAAAGCAGAAATAAAATTGAAATCAATTTGTAATTCATTTACTGATTCTGTGCATAAAACATCACATGATGATGAATTGACTGAAATGTTTGTTAAAAAGGAAACAATAGTAGATGATAGTGATAATGATGTCTTAGATAATAAAGGTGTTAAAAGTGAAATTGGAGATAGTGATTATGCTGAAATAAACGATAGTTGCAGTGTTGGAAACGATTCTTTTGAAGAATTTGATCCAGAAAATGGTAACTATATGGATGAATCTTTCAAAAAGTCAGAGAGTGATTTAAGTAAATGCACAGAATCAAAAATCAATATTAATTCTGATGAAAATCCAAAATCAATTAATTTCAATAAAGTAAAGGAATCTGAAATTGATTTAGGTAAAACTTCAAAGTGTGAGAAACAGGATAACTCAGTTTATCAGTACAACGAGTGTTTAAATGCTTATATCAAAATTGAGCCTCCTGAAGAAAACCAAGAACATAATGGTAATGAAAACAAGTTAAATGAAAATAGTACTAAAACTGTACCAACTGTAGAGTCATTGAGTTTATCACCAAAATTACCTAACATTTTGAAAAGAAAATTATCAAGTGAAAATACAAATAATGATGGTCTAGAAAAATGTAATAAAATAGATTTTCAAAAACTGAAAGACTTGAAAATTCCAAAGTTAGATCTTCAGGATTCTACAAAAATTAAGACAGAAGAAGATGGAGTAATGTACGTCACGGCAAAAGGCTCTAAACCAAATGAAGTGCTCTTAATAAAAGTTAAAAAAATGAACAAACCTAATGAAAAAAAAGTGGAGAAGTCAACTGGAAAAAAAAAGGGAGATATGCTTTCTTATCATAAAACATTTACAAAACTTAATACAAAAAGAGATAATTCTATTGACGAACAAATAGAACAATATAAGAAGAAAAGAGTTCAAATTTTAGGAGAAACTGCAAGTATGACAGAAACGGATTTTGATGAAGACTTAGAAGCAACAGTTATAAGTGGAGATGTTTCAGCCGATACAGAAACTTTTGTACAAGAAGATGAGTCAGAAACTAAAGAAGAATATTTAGATGAAACAGAATTTTCTGAAACGCCTGCATTTTCATCACAACACTCAGCTCAGCTACAAAGAATGCAGCAGCGCTGGAAAGATATTAAAAAAAGACATGAAACTATAAATAAAGATTTAGCAGAAGATTGCACAGATAGATTAAAATCTCTTTTAAAACAAAAAGATGAACATATTCAAGATTTTATTACTTATTTAAAACAACGGAGAATTGTTGTATCACGTTTGAAGGATGAGCATATAATTTCATTGTATGAAGCAAAAAATAATGTAGTTTTGGATAGGTTACCAACAGAATCTTTTGATTCACCTCAGGAGGAAATAGATCCTTTTGATTTTAAGGAAATTTTCGATTGTGACTTTTGTGATCAATCTTTTTCCAGCAGGGATATGGAATATGAACATTCAAAAATTCACGATTTCAAATTAATGCATTATTGCGAAGATTGTCAACAAGAATTTCTTACTCATAAAGGAAAGCGTAGTCACAATATAACTTGCGTGCAGAAATTAATGTGCAAATACTGTGATATGATACTAGAGTCTAAAGGAAAGAAAAGGCAGCATGAGCAAAAACACTGCGATGAGCAAAATGGCCAGCTTTGCGACCTATGTGGAGAGAAATTCAAACATCAAGGTACCTTAGATCAACATGTAAAATCTCGACACATGCAGTTAGAAAAGATTTACAAATGTCCACAATGTCCAAAAAGATTTGCCTTAAGGACCAAACTTACTTTCCACCTAAAAACAGTTCACACCACTAACAGACCTTATTTATGCGAAGATTGTGGATCAGATTTTAAGAACCCTGCTAGTCTTAGACATCATAGAATACGAAAGCATCAGCCAACAAATAATAAAAAAGAATGTACAGTTTGTCACAAGATGATCCCAGTCTACAGCATGTCAAAACACATGCATACTCACAAAGCCTACACAATCGAATGTCCTCATTGTGATAAAATGTTTAAGAATACATCAACTTTAAAACAGCATATAAGAATTCATGAAGATCAACGTCAATACAAGTGTGACATATGCGGCGTTGGGTTCAACAGACGAGACGGTCTAAGGTTACACATGAAGGTCCATTTAAAAGCTGATAGCAGAGGTTTAAAAGAATGTTCATGTCAAATTTGCGGTGAAAAGTTCCCCAATCATTCAATGCTGGTCATCCACAGGAATCGTACACATAAAGATGGTCGAAACTATACCTGTCATATATGTAACAGATCCATGATTTCCACTCGATCACTGGAATGGCATTTGGCGCACATACACAACGAAACGATGCCAGGCATCGTCAAGGATGAGTCTAGCGTTGATGTTGAGACCAAGAGAGTATCTTGCTATCACTGCGATAAAACCTTTAAAACTGAAATGATCTTGAGGACGCATGTAAAGAACACGCATGTGGAAAAAGAGCCTATGAAATGCTTGGATTGCGAGTTGAGATTTACGTCCGAAGTTCGACTAAAGCACCACATGATGATCGAGCACAATCGTTTGGAAGGAACCCTTGCCTGTCCTCATTGTCCTAAGAGATTCGTCAACCAACTGAGGCTGAAGACGCACATGATATCACACTCGGACGAACGACCATACACGTGTGATCTGTGCGGTTTTATGCTAAAAACGAAGATTCAACTGATTAAACACAAGCAAAACAGACACAGTAATGAGCGGCCACTACAGTGCAGATATTGCTCTTGGAGGTGTAAGCAAGTAAGCGCACTAGTTTGTCATGAAAGAACCCACACGAACGAAAGGCCCTACAGCTGCAGCGTGTGCAAGCAGAAGTTTAAGTATCTAGGAGATAAAAACAAGCATGAAAGGCGGCACGAGAGTCTTGGTGGTTCTGGATTTAAAAGGATCGTTACTGGAAGAAACACGAATAAGATTGTTCGGAAAAAAGATCAAATTCTACAAGAGCAGGATTCTGAACTAGATCAAGAGGAATTTGAGCACCAAGAGGAAGAAGAATATGAAGAGCAGGTTGAAGGAGAAGTCGAAACTTTTGATGAAACGCAAATTATTAAGTTTGATGAAAATGGAGAAATAATCAATGAAGGGTCTGAAGCTTCCTATGAACAGATGTATGTAGAAGATGCGTCACAAGATACAAGCGACTCGACTAAAGTCGTGATAGGTATGGAAGAAGGTTCAGTTTATACCGAAGAAGTTACAGCAGATCAAATGGAATCAGAAATCATCACTAGTAATATAATAAATGAGCAATTGCTGCAGCCAGGTACTGTAGTTCATCTTCAGCAACAAGATGAAACTGGAAAAATTCAAGTGATACCAGTTATGTTGTCTTTACCAGATTTATCGGACGCTACTGCTGAAGTTAATTTAGCAACCTCTTCTATAATGTATAATAACAACTAA
Protein Sequence: MKKLNLSDNEDHNYTDALTEKQENSNTGFTSNFIYSKVANSGKEKYIGLKITNLNDLKKAIPRLKLPTILSSASSSPSSIKKTRAVSLEIQQKLHRYCRTCAGLKVPLVDIFSEKGAQMRLAQQIRHLEEINEFDSLSTQMCMDCICDLRMSYKFFMQIKKAEIKLKSICNSFTDSVHKTSHDDELTEMFVKKETIVDDSDNDVLDNKGVKSEIGDSDYAEINDSCSVGNDSFEEFDPENGNYMDESFKKSESDLSKCTESKININSDENPKSINFNKVKESEIDLGKTSKCEKQDNSVYQYNECLNAYIKIEPPEENQEHNGNENKLNENSTKTVPTVESLSLSPKLPNILKRKLSSENTNNDGLEKCNKIDFQKLKDLKIPKLDLQDSTKIKTEEDGVMYVTAKGSKPNEVLLIKVKKMNKPNEKKVEKSTGKKKGDMLSYHKTFTKLNTKRDNSIDEQIEQYKKKRVQILGETASMTETDFDEDLEATVISGDVSADTETFVQEDESETKEEYLDETEFSETPAFSSQHSAQLQRMQQRWKDIKKRHETINKDLAEDCTDRLKSLLKQKDEHIQDFITYLKQRRIVVSRLKDEHIISLYEAKNNVVLDRLPTESFDSPQEEIDPFDFKEIFDCDFCDQSFSSRDMEYEHSKIHDFKLMHYCEDCQQEFLTHKGKRSHNITCVQKLMCKYCDMILESKGKKRQHEQKHCDEQNGQLCDLCGEKFKHQGTLDQHVKSRHMQLEKIYKCPQCPKRFALRTKLTFHLKTVHTTNRPYLCEDCGSDFKNPASLRHHRIRKHQPTNNKKECTVCHKMIPVYSMSKHMHTHKAYTIECPHCDKMFKNTSTLKQHIRIHEDQRQYKCDICGVGFNRRDGLRLHMKVHLKADSRGLKECSCQICGEKFPNHSMLVIHRNRTHKDGRNYTCHICNRSMISTRSLEWHLAHIHNETMPGIVKDESSVDVETKRVSCYHCDKTFKTEMILRTHVKNTHVEKEPMKCLDCELRFTSEVRLKHHMMIEHNRLEGTLACPHCPKRFVNQLRLKTHMISHSDERPYTCDLCGFMLKTKIQLIKHKQNRHSNERPLQCRYCSWRCKQVSALVCHERTHTNERPYSCSVCKQKFKYLGDKNKHERRHESLGGSGFKRIVTGRNTNKIVRKKDQILQEQDSELDQEEFEHQEEEEYEEQVEGEVETFDETQIIKFDENGEIINEGSEASYEQMYVEDASQDTSDSTKVVIGMEEGSVYTEEVTADQMESEIITSNIINEQLLQPGTVVHLQQQDETGKIQVIPVMLSLPDLSDATAEVNLATSSIMYNNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286693;
90% Identity: -
80% Identity: -