Basic Information

Insect: Philotrypesis tridentata
Gene Symbol: -
Assembly: GCA_018906965.1
Location: JACCIB010000054.1:56731-65437[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.8e-05 0.014 16.8 2.2 1 23 426 448 426 448 0.97

2 18 1.6e-05 0.0025 19.2 1.9 1 20 454 473 454 476 0.94

3 18 2.3e-05 0.0036 18.7 0.7 1 23 482 504 482 504 0.99

4 18 0.0004 0.063 14.8 5.3 1 21 510 530 510 532 0.95

5 18 5.6e-05 0.0088 17.5 4.8 1 23 538 560 538 560 0.99

6 18 2.4e-05 0.0038 18.6 5.3 1 23 566 588 566 588 0.97

7 18 9.1e-06 0.0014 20.0 7.1 1 23 594 616 594 616 0.97

8 18 8.8e-08 1.4e-05 26.3 2.7 1 23 622 644 622 644 0.98

9 18 6.5e-05 0.01 17.3 6.7 1 23 650 672 650 672 0.97

10 18 2e-05 0.0032 18.9 5.8 1 23 678 700 678 700 0.98

11 18 5.4e-07 8.5e-05 23.8 2.9 1 23 706 728 706 728 0.98

12 18 8e-06 0.0013 20.1 7.8 1 23 734 756 734 756 0.98

13 18 2.5e-05 0.004 18.6 9.1 1 23 762 784 762 784 0.98

14 18 3.3e-05 0.0052 18.2 7.5 1 23 790 812 790 812 0.98

15 18 0.00037 0.058 14.9 8.9 1 21 818 838 818 840 0.94

16 18 1.2e-05 0.0019 19.6 0.4 1 23 846 868 846 868 0.98

17 18 0.029 4.6 8.9 4.5 1 23 878 900 878 900 0.98

18 18 4.7e-07 7.4e-05 24.0 1.3 1 23 906 928 906 928 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.8e-05	0.014	16.8	2.2	1	23	426	448	426	448	0.97
2	18	1.6e-05	0.0025	19.2	1.9	1	20	454	473	454	476	0.94
3	18	2.3e-05	0.0036	18.7	0.7	1	23	482	504	482	504	0.99
4	18	0.0004	0.063	14.8	5.3	1	21	510	530	510	532	0.95
5	18	5.6e-05	0.0088	17.5	4.8	1	23	538	560	538	560	0.99
6	18	2.4e-05	0.0038	18.6	5.3	1	23	566	588	566	588	0.97
7	18	9.1e-06	0.0014	20.0	7.1	1	23	594	616	594	616	0.97
8	18	8.8e-08	1.4e-05	26.3	2.7	1	23	622	644	622	644	0.98
9	18	6.5e-05	0.01	17.3	6.7	1	23	650	672	650	672	0.97
10	18	2e-05	0.0032	18.9	5.8	1	23	678	700	678	700	0.98
11	18	5.4e-07	8.5e-05	23.8	2.9	1	23	706	728	706	728	0.98
12	18	8e-06	0.0013	20.1	7.8	1	23	734	756	734	756	0.98
13	18	2.5e-05	0.004	18.6	9.1	1	23	762	784	762	784	0.98
14	18	3.3e-05	0.0052	18.2	7.5	1	23	790	812	790	812	0.98
15	18	0.00037	0.058	14.9	8.9	1	21	818	838	818	840	0.94
16	18	1.2e-05	0.0019	19.6	0.4	1	23	846	868	846	868	0.98
17	18	0.029	4.6	8.9	4.5	1	23	878	900	878	900	0.98
18	18	4.7e-07	7.4e-05	24.0	1.3	1	23	906	928	906	928	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAGCAGCATGCTCTGCCAGCTACGACGCAGGCACAACAAGAGGAAGTAAGTGCGGGTCAAAGTGGTCGTTCTTCATATCAAGGTGGTCTGGCAACTTCGACAAGCCATGGCACTGTAGGAAGCAATCCAAATTCATCTGCTGACCTGCGTGTAGGTACAGCTGTAGCCTTAGCATCTTCAGTAGCTAAATACTGGGTACTCACCAATCTGTTTCAAGGGCCGATACCTCAAGTATCGGTCTATCACCACCCTCATCACAGAGCTGGTGCAGGGGGTGGTGAAGTCCAGACCACCAAAGACTCAGCAGTATTGTTGAATCAAGATATGACATTGACCTCTGGTGCTCATCATCAGACATCGACTACACAACCCCATCAGGCGACAGTCAGTAGAAGTAGCCATCAAGGCTCTCTACAGACACCTACACAGATTCCTGTTTCTTTACCTGGACTCAGTCTTGACAGCAGTCACCTTCAAGCAAGTGTAAGTCATTTACAAGCAGCTCATGCACAGATGCAACAGCAAATGCAAACACAGCAAGTCCAATTACATCAGCAACAACAGCAAGCCCAGGCTCACCATCAAATACAGAGTCATCAGAATGCTCAAAATGCAGGACAAACTAATCAGAACTCATCAAGAGATAATAAAAATAAAGAGGAATCATCTGAGCGCTGTAGTGATAATCAGGTACAATCCCATGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTACTAATACAGAAAATGCTAACCATGGCGGAGTGGAAAAGATTGAGAAAAAGGAAGAGATACGCCATTTGAATATGACCCAATTTCAAGTTCCAGATTTAAAAACTGGTAGTCATATGATGGATGTTCGAACCGCAGATGGATCTATTGTTAAAATTAGCGCCGCGAGTGATCAGGATCTTGCAAAGACTTTAGGTGTTGATATATCACAGTATATTAATAAGGGAGCTGTCAATGTTGAAGAGCTGAATCAGATAAATCAACTACTAGCGTATCATGAGGTATTCGGTAAGCTACAAAGTGAGATTGCAGCAGGTACTACGTTGATTGGTAGCACGGTTCCGACTCAAACGGTGACAACTATACAAAACGGTACACCGATTGTGCAGCAAGTGCAGCTTAATAAATTTGACATAAAGACAAGCGACGGTGAAGCGACACCCGGACCTAGTGCCTCTCCGGTATCGGTTGGTAGTCACTCCTGTGAGGTTTGTGGCAAAATCTTCCAATTCCGATATCAGCTTATTGTTCATCGCAGATATCATACGGAACGAAAACCCTTTACCTGCCAGGTTTGTGGCAAGGCATTTACTACAGCTACTGACTTAACACGCCACGGGAAATGCCACTTAGGTGGTTCTATGTACACGTGTGCAGTTTGTTTTCATGTTTTCGCTAATGCTCCTTCATTAGAACGTCACATGAAGCGCCACGCAACTGATAAGCCGTACAATTGTACGGTATGCAATAAAAGTTTCGCAAGGAAAGAACATCTTGATAATCACACAAGGTGTCACACAGGAGAGACTCCATACAGATGTCAGTACTGCGCAAAAACTTTCACGCGTAAAGAACACATGGTAAACCACGAACGCAAACACACGGGAGAAACGCCACATCGGTGTGATATTTGCAAAAAGTCTTTTACGCGTAAAGAACACTTCATGAATCACGTGATGTGGCACACTGGTGAAACGCCTCATCACTGTCAGGTTTGCGGAAAGAAGTACACTCGTAAGGAACACCTGGCCAATCACATGCGCTCACATACCAACGATACTCCTTTCCGTTGTGAAATTTGCGGCAAATCCTTTACGCGCAAGGAGCACTTTACGAATCACATAATGTGGCATACGGGCGAGACGCCGCATCGCTGCGACTTCTGTTCCAAGACCTTCACCAGAAAGGAGCATCTACTCAATCACGTCCGGCAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCATTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGAGAGACGCCGTTCCGCTGCCAGTACTGTCCGAAAGCGTTCACGCGCAAGGACCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCATTCACACGGAAGGAACATTTGACAAACCACGTGCGTCAACATACAGGCGAGTCGCCGCACCGCTGCCACTTCTGTTCGAAGTCTTTCACTCGCAAGGAGCATCTGACGAACCACGTGCGCATACATACCGGCGAGTCGCCTCACAGGTGTGAATTTTGTCAGCGAACCTTCACTAGGAAAGAGCATTTGAACAACCATCTCAGACAGCACACCGGTGACTCGTCGCACTGCTGTAACGTCTGCAACAAGCCGTTCACGCGCAAGGAGCACCTAATAAATCATATGCGCTGCCACACAGGCGAACGCCCATTTGTCTGCACGGAATGTGGCAAGAGTTTCCCATTGAAAGGCAATTTACTTTTCCACATGCGTTCGCACAACAAGGGTAGTCAGGCAGAGCGCCCGTTCCGCTGTGACCTTTGTCCCAAGGACTTCATGTGTAAGGGTCACCTGGTCTCTCACCGACGTTCCCATTCAGACGAGCGGCCTCACAGTTGCCCAGATTGCGGCAAGACTTTTGTCGAGAAGGGTAACATGCTGCGGCATCTTCGAAAGCACGCGGCTGAAGGTCCGCCCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTGGGACATCCGCTGGCTCCGCCTCAACAGGCGCCGCCGACCGGCGTTGGCTTACCCCAGCACACTGTAGTCGTACCTACGCCACCCGGAGTACTAACATCGTACTAA
Protein Sequence: MNSEQHALPATTQAQQEEVSAGQSGRSSYQGGLATSTSHGTVGSNPNSSADLRVGTAVALASSVAKYWVLTNLFQGPIPQVSVYHHPHHRAGAGGGEVQTTKDSAVLLNQDMTLTSGAHHQTSTTQPHQATVSRSSHQGSLQTPTQIPVSLPGLSLDSSHLQASVSHLQAAHAQMQQQMQTQQVQLHQQQQQAQAHHQIQSHQNAQNAGQTNQNSSRDNKNKEESSERCSDNQVQSHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXATNTENANHGGVEKIEKKEEIRHLNMTQFQVPDLKTGSHMMDVRTADGSIVKISAASDQDLAKTLGVDISQYINKGAVNVEELNQINQLLAYHEVFGKLQSEIAAGTTLIGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHSCEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTATDLTRHGKCHLGGSMYTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCNKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHERKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCNKPFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVGHPLAPPQQAPPTGVGLPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286639;
90% Identity: -
80% Identity: -