Ptri035566.1
Basic Information
- Insect
- Philotrypesis tridentata
- Gene Symbol
- -
- Assembly
- GCA_018906965.1
- Location
- JACCIB010000873.1:34207-38993[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-10 1.3e-06 29.1 0.0 6 35 170 198 168 206 0.90 2 2 5.9 1e+04 -2.6 0.0 28 37 510 520 510 523 0.75
Sequence Information
- Coding Sequence
- ATGAAAGTAGCCTCCGAGATCGCCCTTTATCCTCATAAAATTTTCGGAAACACTACCCATTTTTTCACCATAGTATTTGATGCCCAATTTTTTCTGCCCATACTCTCAGCATCGCGCGTTTCGTCGGGGACATGCGTAGGTGGTAGCCAGTGCATAGTAAGCTGTGCTGTATTCTCAGAAGGTGGTGAACACATGTTGGCCTGCCACGCATTGCTACCGTTGGTGTGCGTTGATCAGCCCGGACAAGTAAGATACGTACTTTTTCTCAAATTATTTGCTGCAATTTTGAAGAATGTCGCCAAAAAAAAAGGGAAAACAGAATCTAAGACTAAAAAAGAAAATGTGAAAATCTGCAGATCTGAAAGAAAGAGCAAGTGTAAAAAAGAGCAAGTGAAAAAAAGTGCAAGTGTAAGGCGCAAGAACGTTGTAATAAAAGTAAAAGAAGTGGTAAAAGAGGTGAAAAAGAAACAAAAAGTGCAACGAAAGCTTTATTCTTTGGTAGATGTACAGAAAGCTGTCAAAGCTGTTAATCTTGGTACATCCATAAGACAAGCTGCAAAGAAATATGGTGTTCCGCCAACAACTATACATAGAGGTATGAAAAATACAGATAAGTCCAATTCAACGATGGACCCTCCTCCAATTTTGTCATTAGAAGTTGAAAAAGAAATTGAAAGCTGGCTTCTGTATCGAGCTGAAAAAGGATTTCCAGCGACGAAAACTGAATTATTGGACTGCGTACAAAGCTATATTCGCCAACTTGGAAATAAAATTCCCAAGACTCCGTTTACTAATGACAGACCTGGTCGTCACTGGTATGAGAGGTTTTTGGCTCGACATCCTGAAATAGCTATCAGGACTCCTCAGCATCTTACTATGACACGTGCTACTGTGACTGAAGCTGATTTAAGAGGATGGTTTTCTGACATTAGTACGTACTTGGAATCAAAAGACTTAATTAATATCGATCCATCGAGAGTTTATAACTGTGATGAAACAAACATACAGTTTATTCCAAAATCAGAGAAGATATTGACTAGGAAAGGGGCTCCTAATGCTTATAAGATTGTCGATGGATTTGAAAAAGAAAATTTGACTGCACTTTTTATGTTTGCTGCTGACGGAACAAGAGTTCCACCTATGATAATGTTTAAAATAAAAAAGGAACATTTTGCACCTGCACTCGAACTAGCCTTGAATTCATTTATCAATGAAAAGAAAACTATTGTAAATGGATTTAAAGTTACTGGTTTAATGCCTTTTAATCCTGAAGCAGTACAATACAATATTTTAGCTAAAAAGAAAGGTAAAAGGAAAATAGATGAGCCAATACAAGAAGTAAATCCAGGTGATGAATTGAAAGATATGAAAAAGCATCTGATCACCTTGGAAAAGAATTTACCTGAAATTATGCTCGCCAATTTCAAAGAAACTGAGACTACTGGTGTATATAATATAGATACAGAGAACAGCAGTTTGTTTCAGTATTGGCTTGAAAATCACAAGGTGATTGTAGTGAGTAATACTGTGCCTACAAGTACGTTTGTTGAATCTGTGAATGAAAGTATTTTGAATGACACAACTAGTGGTATAATTATAGAATTAAACAATGTAGAGCAAGATGAATTAAATACGCTTTTAAGTAATGATAGTTTAGAAAATATGTCTTTAGAAACAAACGATAATACAAATGAATACGTTGAAGAGCACATAAACGATACATTGTCTATAAATTTAGATAGCGTAATCATTAAAAAAGAAAAAATAACTGAAAATACAAATATGGAAAATCCGTTGAATACCTCTGAAGTAATTAACAAAAATATCAATGACGAGGTACAAGAGTCTGCTACAATTTCCTTAAAAAACAAAGAGAATTGTGAAACTACAGTGTCTACTGATTTCGACTCAAATCTTCAGGTAACGGACCAAGAAATTATCAATGAAGAAGTGCGGGAGTCTACCACAATTTTCCTCAAAGACAAAGATAGTTTTGAAACTGTGTCTACTACTGATTTAGACTCAAATCTTCAGATGACGGGCCAAGAAAAAGATAACACTAATGATGCAGTCGACGAGCAATTATTTCTTTGTCAAAATCAAAATGCTTCACCTGTTTTACAAGAAAATATTCAAAACATTTGTAAAGAAAGATGCAATGAATCAAGTAACTTTAAACAACACAAAGAGAATATTGGTCTTGCTTCTATAAATTCAGATCGAGTCAGTGATGAAAAAGAATGTTTCCAAAAAACTTTTACCTTACCCCTGGAATATTTATCAAAGAAAAAACGAGAAAAATTAAATACTACTAAAAAGCCTAAACTACCTTCTGTGGGAACATCAGAACACTGGTGGAAAATTCAAATGGAAAAAGAAGAAGCGCAAAAAAAGAAGGAAGAAGAAAAAGCAAAAAGAAAATTAGTACGAGAAGAGAACAAGAAATTTGCACATGAGAAAAAGAAATTGGCAGAGGAGAAAAAAAATTACTTGCTGGACTTAAAGAAGAAAATGAACGAGATTCAAAAAAAAATAAAAACGGAAAAACCATAA
- Protein Sequence
- MKVASEIALYPHKIFGNTTHFFTIVFDAQFFLPILSASRVSSGTCVGGSQCIVSCAVFSEGGEHMLACHALLPLVCVDQPGQVRYVLFLKLFAAILKNVAKKKGKTESKTKKENVKICRSERKSKCKKEQVKKSASVRRKNVVIKVKEVVKEVKKKQKVQRKLYSLVDVQKAVKAVNLGTSIRQAAKKYGVPPTTIHRGMKNTDKSNSTMDPPPILSLEVEKEIESWLLYRAEKGFPATKTELLDCVQSYIRQLGNKIPKTPFTNDRPGRHWYERFLARHPEIAIRTPQHLTMTRATVTEADLRGWFSDISTYLESKDLINIDPSRVYNCDETNIQFIPKSEKILTRKGAPNAYKIVDGFEKENLTALFMFAADGTRVPPMIMFKIKKEHFAPALELALNSFINEKKTIVNGFKVTGLMPFNPEAVQYNILAKKKGKRKIDEPIQEVNPGDELKDMKKHLITLEKNLPEIMLANFKETETTGVYNIDTENSSLFQYWLENHKVIVVSNTVPTSTFVESVNESILNDTTSGIIIELNNVEQDELNTLLSNDSLENMSLETNDNTNEYVEEHINDTLSINLDSVIIKKEKITENTNMENPLNTSEVINKNINDEVQESATISLKNKENCETTVSTDFDSNLQVTDQEIINEEVRESTTIFLKDKDSFETVSTTDLDSNLQMTGQEKDNTNDAVDEQLFLCQNQNASPVLQENIQNICKERCNESSNFKQHKENIGLASINSDRVSDEKECFQKTFTLPLEYLSKKKREKLNTTKKPKLPSVGTSEHWWKIQMEKEEAQKKKEEEKAKRKLVREENKKFAHEKKKLAEEKKNYLLDLKKKMNEIQKKIKTEKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01190252;
- 90% Identity
- iTF_01190252;
- 80% Identity
- -