Ptri029952.1
Basic Information
- Insect
- Philotrypesis tridentata
- Gene Symbol
- -
- Assembly
- GCA_018906965.1
- Location
- JACCIB010001038.1:50811-53985[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-10 1.1e-06 29.3 0.0 6 35 57 85 55 93 0.90 2 2 5 8.6e+03 -2.4 0.0 28 37 397 407 397 410 0.75
Sequence Information
- Coding Sequence
- ATGAATATAAATAGCAAATCTGAAAGAAAGAGCAAGTGTAAAAAAGAGCAAGTGAAAAAAAGTGCAAGTGTAAGGCGCAAGAACGTTGTAATAAAAGTAAAAGAAGTGGTAAAAGAGGTGAAAAAGAAACAAAAAGTGCAACGAAAGCTTTATTCTTTGGTAGATGTACAGAAAGCTGTCAAAGCTGTTAATCTTGGTACATCCATAAGACAAGCTGCAAAGAAATATGGTGTTCCGCCAACAACTATACATAGAGGTATGAAAAATACAGATAAGTCCAATTCAACGATGGGCCCTCCTCCAATTTTGTCATTAGAAGTTGAAAAAGAAATTGAAAGCTGGCTTCTGTATCGAGCTGAAAAAGGATTTCCAGCGACGAAAACTGAATTATTGGACTGCGTACAAAGCTATATTCGCCAACTTGGAAATAAAATTCCCAAGACTCCGTTTACTAATGACAGACCTGGTCGTCACTGGTATGAGAGGTTTTTGGCTCGACATCCTGAAATAGCTATCAGGACTCCTCAGCATCTTACTATGACACGTGCTACTGTGACTGAAGCTGATTTAAGAGGATGGTTTTCTGACATTAGTACGTACTTGGAATCAAAAGACTTAATTAATATCGATCCATCGAGAGTTTATAACTGTGATGAAACAAACATACAGTTTATTCCAAAATCAGAGAAGATATTGACTAGGAAAGGGGCTCCTAATGCTTATAAGATTGTCGATGGATTTGAAAAAGAAAATTTGACTGCACTTTTTATGTTTGCTGCTGACGGAACAAGAGTTCCACCTATGATAATGTTTAAAATAAAAAAGGAACATTTTGCACCTGCACTCGAACTAGCCTTGAATTCATTTATCAATGAAAAGAAAACTATTGTAAATGGATTTAAAGTTACTGGTTTAATGCCTTTTAATCCTGAAGCAGTACAATACAATATTTTAGCTAAAAAGAAAGGTAAAAGGAAAATAGATGAGCCAATACAAGAAGTAAATCCAGGTGATGAATTGAAAGATATGAAAAAGCATCTGATCACCTTGGAAAAGAATTTACCTCAAATTATGCTCGCCAATTTCAAAGAAACTGAGACTACTGGTGTATATAATATAGATACAGAGAACAGCAGTTTGTTTCAGTATTGGCTTGAAAATCACAAGGTGATTGTAGTGAGTAATACTGTGCCTACAAGTACGTTTGTTGAATCTGTGAATGAAAGTATTTTGAATGACACAACTAGTGGTATAATTATAGAATTAAACAATGTAGAGCAAGATGAATTAAATACGCTTTTAAGTAATGATAGTTTAGAAAATATGTCTTTAGAAACAAACGATAATACAAATGAATACGTTGAAGAGCACATAAACGATACATTGTCTATAAATTTAGATAGCGTAATCATTAAAAAAGAAAAAATAACTGAAAATACAAATATGGAAAATCCGTTGAATACCTCTGAAGTAATTAACAAAAATATCAATGACGAGGTACAAGAGTCTGCTACAATTTCCTTAAAAAACAAAGAGAATTGTGAAACTACAGTGTCTAGTGATTTCGACTCAAATCTTCAGGTAACGGACCAAGAAATTATCAATGAAGAAGTGCGGGAGTCTACCACAATTTTCCTCAAAGACAAAGATAGTTTTGAAACTGTGTCTACTACTGATTTAGACTCAAATCTTCAGATGACGGGCCAAGAAAAAGATAACACTAATGATGCAGTCGACGAGCAATTATTTCTTTGTCAAAATCAAAATGCTTCACCTGTTTTACAAGAAAATATTCAAAACATTTGTAAAGAAAGATGCAATGAATCAAGTAACTTTAAACAACACAAAGAGAATATTGGTCTTGCTTCTATAAATTCAGATCGAGTCAGTGATGAAAAAGAATGTTTCCAAAAAACTTTTACCTTACCCCTGGAATATTTATCAAAGAAAAAACGAGAAAAATTAAATACTACTAAAAAGCCTAAACTACCTTCTGTGGGAACATCAGAACACTGGTGGAAAATTCAAATGGAAAAAGAAGAAGCGCAAAAAAAGAAGGAAGAAGAAAAAGCAAAAAGAAAATTAGTACGAGAAGAGAACAAGAAATTGGCACATGAGAAAAAGAAATTGGCAGAGGAGAAAAAAAATTACTTGCTGGACTTAAAGAAGAAAATGAACGAGATTCAAAAAAAAATAAAAACGGAAAAACCATAA
- Protein Sequence
- MNINSKSERKSKCKKEQVKKSASVRRKNVVIKVKEVVKEVKKKQKVQRKLYSLVDVQKAVKAVNLGTSIRQAAKKYGVPPTTIHRGMKNTDKSNSTMGPPPILSLEVEKEIESWLLYRAEKGFPATKTELLDCVQSYIRQLGNKIPKTPFTNDRPGRHWYERFLARHPEIAIRTPQHLTMTRATVTEADLRGWFSDISTYLESKDLINIDPSRVYNCDETNIQFIPKSEKILTRKGAPNAYKIVDGFEKENLTALFMFAADGTRVPPMIMFKIKKEHFAPALELALNSFINEKKTIVNGFKVTGLMPFNPEAVQYNILAKKKGKRKIDEPIQEVNPGDELKDMKKHLITLEKNLPQIMLANFKETETTGVYNIDTENSSLFQYWLENHKVIVVSNTVPTSTFVESVNESILNDTTSGIIIELNNVEQDELNTLLSNDSLENMSLETNDNTNEYVEEHINDTLSINLDSVIIKKEKITENTNMENPLNTSEVINKNINDEVQESATISLKNKENCETTVSSDFDSNLQVTDQEIINEEVRESTTIFLKDKDSFETVSTTDLDSNLQMTGQEKDNTNDAVDEQLFLCQNQNASPVLQENIQNICKERCNESSNFKQHKENIGLASINSDRVSDEKECFQKTFTLPLEYLSKKKREKLNTTKKPKLPSVGTSEHWWKIQMEKEEAQKKKEEEKAKRKLVREENKKLAHEKKKLAEEKKNYLLDLKKKMNEIQKKIKTEKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01190253;
- 90% Identity
- iTF_01190253;
- 80% Identity
- -